RNA–Protein interactions for RNA: ENST00000461707.5

NPHP1-209, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 3,822 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-209ENST00000461707 LRRC10BA6NIK2 292 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 TEX33O43247 280 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 MYO1BO43795 1136 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 UBASH3AP57075 661 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 CEP135Q66GS9 1140 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 MXD3Q9BW11 206 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 NAT10Q9H0A0 1025 aaKnown RBP8.36□□□□□ -1.07
NPHP1-209ENST00000461707 GNL3LQ9NVN8 582 aaKnown RBP8.36□□□□□ -1.07
NPHP1-209ENST00000461707 ANKIB1Q9P2G1 1089 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 USP21Q9UK80 565 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 SRPRBQ9Y5M8 271 aaKnown RBP8.36□□□□□ -1.07
NPHP1-209ENST00000461707 VWA3AA6NCI4 1184 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 TPM3P06753 285 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 CLK2P49760 499 aaKnown RBP8.36□□□□□ -1.07
NPHP1-209ENST00000461707 ADKP55263 362 aaKnown RBP8.36□□□□□ -1.07
NPHP1-209ENST00000461707 GPSM2P81274 684 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 TFAP4Q01664 338 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 PTGDRQ13258 359 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 CLEC10AQ8IUN9 316 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 MAPKAPK5Q8IW41 473 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 PROM2Q8N271 834 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 TGFBRAP1Q8WUH2 860 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 PPP1R13BQ96KQ4 1090 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 RNF26Q9BY78 433 aaPredicted RBP8.36□□□□□ -1.07
NPHP1-209ENST00000461707 RNF41Q9H4P4 317 aaPredicted RBP8.36□□□□□ -1.07
NPHP1-209ENST00000461707 L2HGDHQ9H9P8 463 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 FNDC1Q4ZHG4 1894 aaPredicted RBP8.36□□□□□ -1.07
NPHP1-209ENST00000461707 UBAP1LF5GYI3 381 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 PRPF3O43395 683 aaKnown RBP8.36□□□□□ -1.07
NPHP1-209ENST00000461707 CUL4BQ13620 913 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 MTF1Q14872 753 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 KLHL10Q6JEL2 608 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 PLIN2Q99541 437 aa8.36□□□□□ -1.07
NPHP1-209ENST00000461707 ZNF215Q9UL58 517 aaPredicted RBP8.36□□□□□ -1.07
NPHP1-209ENST00000461707 RTCBQ9Y3I0 505 aaKnown RBP8.36□□□□□ -1.07
NPHP1-209ENST00000461707 SERPINC1P01008 464 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 SMARCA1P28370 1054 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 MCM7P33993 719 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 MYL5Q02045 173 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 SEMA3FQ13275 785 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 MORC3Q14149 939 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 CFAP100Q494V2 611 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 RILPL1Q5EBL4 403 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 TPTE2Q6XPS3 522 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 CATIPQ7Z7H3 387 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 MAPK8IP1Q9UQF2 711 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 NFE2L3Q9Y4A8 694 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 SMCHD1A6NHR9 2005 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 TSPY2A6NKD2 308 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 NKRFO15226 690 aaKnown RBP eCLIP8.35□□□□□ -1.07
NPHP1-209ENST00000461707 PPP4R3BQ5MIZ7 849 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 CDKAL1Q5VV42 579 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 EEF2KMTQ96G04 330 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 PAGE5Q96GU1 130 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 RALGAPA2Q2PPJ7 1873 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
NPHP1-209ENST00000461707 SAFBQ15424 915 aaKnown RBP eCLIP8.35□□□□□ -1.07
NPHP1-209ENST00000461707 ZRSR1Q15695 479 aaKnown RBP8.35□□□□□ -1.07
NPHP1-209ENST00000461707 PRR5LQ6MZQ0 368 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 ZNF662Q6ZS27 426 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 RTFDC1Q9BY42 306 aaPredicted RBP8.35□□□□□ -1.07
NPHP1-209ENST00000461707 XDHP47989 1333 aa8.35□□□□□ -1.07
NPHP1-209ENST00000461707 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.34□□□□□ -1.07
NPHP1-209ENST00000461707 ABL1P00519 1130 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 ZBTB48P10074 688 aaPredicted RBP8.34□□□□□ -1.07
NPHP1-209ENST00000461707 KRT2P35908 639 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 CBX1P83916 185 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 SYT10Q6XYQ8 523 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 EPC1Q9H2F5 836 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 TMEM60Q9H2L4 133 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 RFC4P35249 363 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 FKBP1AP62942 108 aaKnown RBP8.34□□□□□ -1.07
NPHP1-209ENST00000461707 PPP2R5BQ15173 497 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 C12orf60Q5U649 245 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 IQCA1Q86XH1 822 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 DZIP1Q86YF9 867 aaKnown RBP8.34□□□□□ -1.07
NPHP1-209ENST00000461707 TMTC2Q8N394 836 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 JMYQ8N9B5 988 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 MBOAT7Q96N66 472 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 IRX2Q9BZI1 471 aaPredicted RBP8.34□□□□□ -1.07
NPHP1-209ENST00000461707 POLLQ9UGP5 575 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 MAD2L2Q9UI95 211 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 TRIM75PA6NK02 468 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 PTPN14Q15678 1187 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 SHROOM1Q2M3G4 852 aaPredicted RBP8.34□□□□□ -1.07
NPHP1-209ENST00000461707 PDXDC2PQ6P474 469 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 TOGARAM2Q6ZUX3 1019 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 VSTM4Q8IW00 320 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 DESI2Q9BSY9 194 aa8.34□□□□□ -1.07
NPHP1-209ENST00000461707 NPM3O75607 178 aaKnown RBP8.33□□□□□ -1.08
NPHP1-209ENST00000461707 ADRA2BP18089 450 aa8.33□□□□□ -1.08
NPHP1-209ENST00000461707 RHBDL3P58872 404 aa8.33□□□□□ -1.08
NPHP1-209ENST00000461707 GHRHRQ02643 423 aa8.33□□□□□ -1.08
NPHP1-209ENST00000461707 UBE2Q2Q8WVN8 375 aa8.33□□□□□ -1.08
NPHP1-209ENST00000461707 WASF1Q92558 559 aa8.33□□□□□ -1.08
NPHP1-209ENST00000461707 PCDHAC2Q9Y5I4 1007 aa8.33□□□□□ -1.08
NPHP1-209ENST00000461707 CCDC196A0A1B0GTZ2 297 aa8.33□□□□□ -1.08
NPHP1-209ENST00000461707 PFASO15067 1338 aa8.33□□□□□ -1.08
NPHP1-209ENST00000461707 TFRCP02786 760 aaKnown RBP8.33□□□□□ -1.08
NPHP1-209ENST00000461707 TTC38Q5R3I4 469 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms