RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.36□□□□□ -1.39
CCT4-203ENST00000461540 CEP128Q6ZU80 1094 aa6.36□□□□□ -1.39
CCT4-203ENST00000461540 C3orf58Q8NDZ4 430 aa6.36□□□□□ -1.39
CCT4-203ENST00000461540 C1QTNF3Q9BXJ4 246 aa6.36□□□□□ -1.39
CCT4-203ENST00000461540 ZMYM5Q9UJ78 669 aa6.36□□□□□ -1.39
CCT4-203ENST00000461540 FBXO24O75426 580 aa6.35□□□□□ -1.39
CCT4-203ENST00000461540 ZNF20P17024 532 aa6.35□□□□□ -1.39
CCT4-203ENST00000461540 CNR2P34972 360 aa6.35□□□□□ -1.39
CCT4-203ENST00000461540 NCKAP1LP55160 1127 aa6.35□□□□□ -1.39
CCT4-203ENST00000461540 ERVFRD-1P60508 538 aa6.35□□□□□ -1.39
CCT4-203ENST00000461540 PCNX4Q63HM2 1172 aa6.35□□□□□ -1.39
CCT4-203ENST00000461540 SLC6A19Q695T7 634 aa6.35□□□□□ -1.39
CCT4-203ENST00000461540 KLHL14Q9P2G3 628 aa6.35□□□□□ -1.39
CCT4-203ENST00000461540 TJP2Q9UDY2 1190 aa6.35□□□□□ -1.39
CCT4-203ENST00000461540 DCTN4Q9UJW0 460 aa6.35□□□□□ -1.39
CCT4-203ENST00000461540 PPM1HQ9ULR3 514 aa6.35□□□□□ -1.39
CCT4-203ENST00000461540 RPL10P27635 214 aaKnown RBP6.34□□□□□ -1.39
CCT4-203ENST00000461540 MAPK1P28482 360 aa6.34□□□□□ -1.39
CCT4-203ENST00000461540 GSTT1P30711 240 aa6.34□□□□□ -1.39
CCT4-203ENST00000461540 KIR2DL1P43626 348 aaPredicted RBP6.34□□□□□ -1.39
CCT4-203ENST00000461540 KIR2DL2P43627 348 aaPredicted RBP6.34□□□□□ -1.39
CCT4-203ENST00000461540 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.34□□□□□ -1.39
CCT4-203ENST00000461540 USP51Q70EK9 711 aa6.34□□□□□ -1.39
CCT4-203ENST00000461540 TMEM87BQ96K49 555 aa6.34□□□□□ -1.39
CCT4-203ENST00000461540 C8orf49Q96NF6 230 aa6.34□□□□□ -1.39
CCT4-203ENST00000461540 SPATA25Q9BR10 227 aa6.34□□□□□ -1.39
CCT4-203ENST00000461540 KRTAP3-1Q9BYR8 98 aa6.34□□□□□ -1.39
CCT4-203ENST00000461540 ZNF281Q9Y2X9 895 aa6.34□□□□□ -1.39
CCT4-203ENST00000461540 PNMA6FA0A0J9YX94 578 aa6.33□□□□□ -1.4
CCT4-203ENST00000461540 PGRP06401 933 aa6.33□□□□□ -1.4
CCT4-203ENST00000461540 ACVRL1P37023 503 aa6.33□□□□□ -1.4
CCT4-203ENST00000461540 CLEC16AQ2KHT3 1053 aa6.33□□□□□ -1.4
CCT4-203ENST00000461540 LSRQ86X29 649 aaPredicted RBP6.33□□□□□ -1.4
CCT4-203ENST00000461540 DDX1Q92499 740 aaKnown RBP6.33□□□□□ -1.4
CCT4-203ENST00000461540 LOXL4Q96JB6 756 aa6.33□□□□□ -1.4
CCT4-203ENST00000461540 GNEQ9Y223 722 aaKnown RBP6.33□□□□□ -1.4
CCT4-203ENST00000461540 BRD1O95696 1058 aa6.32□□□□□ -1.4
CCT4-203ENST00000461540 ARL4AP40617 200 aa6.32□□□□□ -1.4
CCT4-203ENST00000461540 LIMS1P48059 325 aa6.32□□□□□ -1.4
CCT4-203ENST00000461540 CDK8P49336 464 aa6.32□□□□□ -1.4
CCT4-203ENST00000461540 DSC3Q14574 896 aa6.32□□□□□ -1.4
CCT4-203ENST00000461540 RAB3GAP1Q15042 981 aa6.32□□□□□ -1.4
CCT4-203ENST00000461540 LIPIQ6XZB0 460 aa6.32□□□□□ -1.4
CCT4-203ENST00000461540 Q8N1X5 172 aa6.32□□□□□ -1.4
CCT4-203ENST00000461540 TTC9BQ8N6N2 239 aa6.32□□□□□ -1.4
CCT4-203ENST00000461540 GAL3ST3Q96A11 431 aa6.32□□□□□ -1.4
CCT4-203ENST00000461540 MAP6Q96JE9 813 aa6.32□□□□□ -1.4
CCT4-203ENST00000461540 RBM47A0AV96 593 aaKnown RBP6.31□□□□□ -1.4
CCT4-203ENST00000461540 WAPLQ7Z5K2 1190 aa6.31□□□□□ -1.4
CCT4-203ENST00000461540 ADGRG2Q8IZP9 1017 aa6.31□□□□□ -1.4
CCT4-203ENST00000461540 SAMD11Q96NU1 681 aa6.31□□□□□ -1.4
CCT4-203ENST00000461540 RBM15Q96T37 977 aaKnown RBP eCLIP6.31□□□□□ -1.4
CCT4-203ENST00000461540 SUSD2Q9UGT4 822 aa6.31□□□□□ -1.4
CCT4-203ENST00000461540 TACC3Q9Y6A5 838 aa6.31□□□□□ -1.4
CCT4-203ENST00000461540 DUSP10Q9Y6W6 482 aa6.31□□□□□ -1.4
CCT4-203ENST00000461540 A0A1B0GTL3 188 aa6.3□□□□□ -1.4
CCT4-203ENST00000461540 TREHO43280 583 aa6.3□□□□□ -1.4
CCT4-203ENST00000461540 LRRN2O75325 713 aa6.3□□□□□ -1.4
CCT4-203ENST00000461540 PFKLP17858 780 aa6.3□□□□□ -1.4
CCT4-203ENST00000461540 ENOX2Q16206 610 aaKnown RBP6.3□□□□□ -1.4
CCT4-203ENST00000461540 VWA3BQ502W6 1294 aa6.3□□□□□ -1.4
CCT4-203ENST00000461540 RNF111Q6ZNA4 994 aa6.3□□□□□ -1.4
CCT4-203ENST00000461540 HOMEZQ8IX15 550 aa6.3□□□□□ -1.4
CCT4-203ENST00000461540 SHISA3A0PJX4 238 aa6.29□□□□□ -1.4
CCT4-203ENST00000461540 FZD7O75084 574 aa6.29□□□□□ -1.4
CCT4-203ENST00000461540 CELA3AP09093 270 aa6.29□□□□□ -1.4
CCT4-203ENST00000461540 MAPK8P45983 427 aa6.29□□□□□ -1.4
CCT4-203ENST00000461540 MCATQ8IVS2 390 aaKnown RBP6.29□□□□□ -1.4
CCT4-203ENST00000461540 RNF141Q8WVD5 230 aa6.29□□□□□ -1.4
CCT4-203ENST00000461540 PLCD4Q9BRC7 762 aa6.29□□□□□ -1.4
CCT4-203ENST00000461540 NUDT19A8MXV4 375 aa6.28□□□□□ -1.4
CCT4-203ENST00000461540 RTP1P59025 263 aa6.28□□□□□ -1.4
CCT4-203ENST00000461540 PDE4BQ07343 736 aa6.28□□□□□ -1.4
CCT4-203ENST00000461540 CRIP3Q6Q6R5 217 aa6.28□□□□□ -1.4
CCT4-203ENST00000461540 CHST13Q8NET6 341 aa6.28□□□□□ -1.4
CCT4-203ENST00000461540 SH3RF3Q8TEJ3 882 aaPredicted RBP6.28□□□□□ -1.4
CCT4-203ENST00000461540 GFRA2O00451 464 aa6.27□□□□□ -1.41
CCT4-203ENST00000461540 IGFBP6P24592 240 aaPredicted RBP6.27□□□□□ -1.41
CCT4-203ENST00000461540 GJA9P57773 515 aa6.27□□□□□ -1.41
CCT4-203ENST00000461540 LAPTM5Q13571 262 aa6.27□□□□□ -1.41
CCT4-203ENST00000461540 SPRED1Q7Z699 444 aa6.27□□□□□ -1.41
CCT4-203ENST00000461540 ZSCAN29Q8IWY8 852 aaPredicted RBP6.27□□□□□ -1.41
CCT4-203ENST00000461540 CYB5D2Q8WUJ1 264 aa6.27□□□□□ -1.41
CCT4-203ENST00000461540 DVL3Q92997 716 aaPredicted RBP6.27□□□□□ -1.41
CCT4-203ENST00000461540 HHIPL1Q96JK4 782 aa6.27□□□□□ -1.41
CCT4-203ENST00000461540 LNPKQ9C0E8 428 aa6.27□□□□□ -1.41
CCT4-203ENST00000461540 SRCIN1Q9C0H9 1055 aa6.27□□□□□ -1.41
CCT4-203ENST00000461540 TGM1P22735 817 aa6.26□□□□□ -1.41
CCT4-203ENST00000461540 GALNT18Q6P9A2 607 aa6.26□□□□□ -1.41
CCT4-203ENST00000461540 FNIP1Q8TF40 1166 aa6.26□□□□□ -1.41
CCT4-203ENST00000461540 OSBPL7Q9BZF2 842 aa6.26□□□□□ -1.41
CCT4-203ENST00000461540 ASCC2Q9H1I8 757 aaPredicted RBP6.26□□□□□ -1.41
CCT4-203ENST00000461540 TAF6LQ9Y6J9 622 aa6.26□□□□□ -1.41
CCT4-203ENST00000461540 IRS2Q9Y4H2 1338 aa6.25□□□□□ -1.41
CCT4-203ENST00000461540 SSU72P8A0A1W2PR75 194 aa6.25□□□□□ -1.41
CCT4-203ENST00000461540 NOBOXO60393 691 aa6.25□□□□□ -1.41
CCT4-203ENST00000461540 MSL3P1P0C860 447 aa6.25□□□□□ -1.41
CCT4-203ENST00000461540 TARBP2Q15633 366 aaKnown RBP6.25□□□□□ -1.41
CCT4-203ENST00000461540 FBF1Q8TES7 1133 aa6.25□□□□□ -1.41
CCT4-203ENST00000461540 ANKRD24Q8TF21 1146 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms