RNA–Protein interactions for RNA: ENST00000461488.5

SMIM7-204, Transcript of small integral membrane protein 7, human

TSL 3

Gene SMIM7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM7-204	ENST00000461488	SLFN13	Q68D06	897 aa		11.94	□□□□□ -0.5
SMIM7-204	ENST00000461488	BLOC1S2	Q6QNY1	142 aa		11.94	□□□□□ -0.5
SMIM7-204	ENST00000461488	CATSPERG	Q6ZRH7	1159 aa		11.94	□□□□□ -0.5
SMIM7-204	ENST00000461488	DHX32	Q7L7V1	743 aa	Known RBP	11.94	□□□□□ -0.5
SMIM7-204	ENST00000461488	TMTC2	Q8N394	836 aa		11.94	□□□□□ -0.5
SMIM7-204	ENST00000461488	PNMA1	Q8ND90	353 aa		11.94	□□□□□ -0.5
SMIM7-204	ENST00000461488	NKX2-3	Q8TAU0	364 aa		11.94	□□□□□ -0.5
SMIM7-204	ENST00000461488	DCAF4	Q8WV16	495 aa		11.94	□□□□□ -0.5
SMIM7-204	ENST00000461488	JAKMIP1	Q96N16	626 aa	Known RBP	11.94	□□□□□ -0.5
SMIM7-204	ENST00000461488	TANGO6	Q9C0B7	1094 aa		11.94	□□□□□ -0.5
SMIM7-204	ENST00000461488	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.94	□□□□□ -0.5
SMIM7-204	ENST00000461488	PRDM10	Q9NQV6	1147 aa		11.94	□□□□□ -0.5
SMIM7-204	ENST00000461488	ADGRA2	Q96PE1	1338 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	TLR2	O60603	784 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	SEC24B	O95487	1268 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	BMP3	P12645	472 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	LIFR	P42702	1097 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	SLC1A4	P43007	532 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	CRHR2	Q13324	411 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	ADCK5	Q3MIX3	580 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	LBX2	Q6XYB7	198 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	SPICE1	Q8N0Z3	855 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	IL17RA	Q96F46	866 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	ZNF236	Q9UL36	1845 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	SMCHD1	A6NHR9	2005 aa		11.93	□□□□□ -0.5
SMIM7-204	ENST00000461488	SH2B2	O14492	632 aa	Predicted RBP	11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	PLA2G6	O60733	806 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	FLOT1	O75955	427 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	SNHG28	P0DPA3	235 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	FDX1	P10109	184 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	CAST	P20810	708 aa	Known RBP	11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	RPS6KB1	P23443	525 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	CTCF	P49711	727 aa	Predicted RBP	11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	HERVK_113	P62684	666 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	EXOSC10	Q01780	885 aa	Known RBP	11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	COG2	Q14746	738 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	KIAA1755	Q5JYT7	1200 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	FAM83B	Q5T0W9	1011 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	GPATCH4	Q5T3I0	446 aa	Known RBP	11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	CHST3	Q7LGC8	479 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	FAM160B2	Q86V87	743 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	MB21D1	Q8N884	522 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	IGDCC4	Q8TDY8	1250 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	CHURC1	Q8WUH1	139 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	LY9	Q9HBG7	655 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	HOXC10	Q9NYD6	342 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	FEM1B	Q9UK73	627 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	CYP46A1	Q9Y6A2	500 aa		11.92	□□□□□ -0.5
SMIM7-204	ENST00000461488	CCDC69	A6NI79	296 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	DDAH1	O94760	285 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	TBC1D8	O95759	1140 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	CYP2C8	P10632	490 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	PDHB	P11177	359 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	STAT2	P52630	851 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	FGD1	P98174	961 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	FAM110C	Q1W6H9	321 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	CCDC96	Q2M329	555 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	ASPRV1	Q53RT3	343 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	RUFY3	Q7L099	469 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	CATIP	Q7Z7H3	387 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	SGMS1	Q86VZ5	419 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	FBXL16	Q8N461	479 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	PRPF38A	Q8NAV1	312 aa	Known RBP	11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	MAP3K14	Q99558	947 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	SLF1	Q9BQI6	1058 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	ZSWIM6	Q9HCJ5	1215 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	MORF4L1	Q9UBU8	362 aa		11.91	□□□□□ -0.5
SMIM7-204	ENST00000461488	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	TMEM232	C9JQI7	657 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	GPR25	O00155	361 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	FOXN1	O15353	648 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	CALM1	P0DP23	149 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	CALM2	P0DP24	149 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	CALM3	P0DP25	149 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	BCR	P11274	1271 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	DSG3	P32926	999 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	ZNF543	Q08ER8	600 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	IK	Q13123	557 aa	Predicted RBP	11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	C17orf99	Q6UX52	265 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	NFXL1	Q6ZNB6	911 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	ZNF654	Q8IZM8	581 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	IL27	Q8NEV9	243 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	NUP88	Q99567	741 aa	Predicted RBP	11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	P2RX7	Q99572	595 aa	Known RBP	11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	BACH2	Q9BYV9	841 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	C22orf23	Q9BZE7	217 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	PPP1R9A	Q9ULJ8	1098 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	ISY1	Q9ULR0	285 aa	Known RBP	11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	MTMR7	Q9Y216	660 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	RABGAP1	Q9Y3P9	1069 aa		11.9	□□□□□ -0.5
SMIM7-204	ENST00000461488	FKTN	O75072	461 aa		11.89	□□□□□ -0.51
SMIM7-204	ENST00000461488	CAPN15	O75808	1086 aa		11.89	□□□□□ -0.51
SMIM7-204	ENST00000461488	PARP1	P09874	1014 aa	Known RBP	11.89	□□□□□ -0.51
SMIM7-204	ENST00000461488	HSPA8	P11142	646 aa	Known RBP	11.89	□□□□□ -0.51
SMIM7-204	ENST00000461488	RBM25	P49756	843 aa	Known RBP	11.89	□□□□□ -0.51
SMIM7-204	ENST00000461488	RCAN1	P53805	252 aa		11.89	□□□□□ -0.51
SMIM7-204	ENST00000461488	SP3	Q02447	781 aa		11.89	□□□□□ -0.51
SMIM7-204	ENST00000461488	KIF22	Q14807	665 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms