RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FARP2O94887 1054 aaPredicted RBP18.26■□□□□ 0.51
VARS-219ENST00000461328 MOV10L1Q9BXT6 1211 aaKnown RBP18.26■□□□□ 0.51
VARS-219ENST00000461328 TOMM22Q9NS69 142 aa18.26■□□□□ 0.51
VARS-219ENST00000461328 SLC15A5A6NIM6 579 aa18.25■□□□□ 0.51
VARS-219ENST00000461328 HSPD1P10809 573 aaKnown RBP18.25■□□□□ 0.51
VARS-219ENST00000461328 PRKAR2AP13861 404 aaKnown RBP18.25■□□□□ 0.51
VARS-219ENST00000461328 GSPT1P15170 499 aaKnown RBP18.25■□□□□ 0.51
VARS-219ENST00000461328 CAPN2P17655 700 aa18.25■□□□□ 0.51
VARS-219ENST00000461328 CCL14Q16627 93 aa18.25■□□□□ 0.51
VARS-219ENST00000461328 FAM83BQ5T0W9 1011 aa18.25■□□□□ 0.51
VARS-219ENST00000461328 CLIP2Q9UDT6 1046 aa18.25■□□□□ 0.51
VARS-219ENST00000461328 A0A0G2JMZ2 1700 aa18.25■□□□□ 0.51
VARS-219ENST00000461328 RLFQ13129 1914 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 IGKV6D-41A0A0C4DH26 115 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 TSPY2A6NKD2 308 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 F5H6K3 240 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 TFAP4Q01664 338 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 KLRC3Q07444 240 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 GRB14Q14449 540 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 ALX1Q15699 326 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 FAM47AQ5JRC9 791 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 MAP3K21Q5TCX8 1036 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 SHCBP1Q8NEM2 672 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 CEP95Q96GE4 821 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 CRISPLD2Q9H0B8 497 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 FBXO28Q9NVF7 368 aa18.24■□□□□ 0.51
VARS-219ENST00000461328 PLIN4Q96Q06 1357 aa18.23■□□□□ 0.51
VARS-219ENST00000461328 NDUFB10O96000 172 aa18.23■□□□□ 0.51
VARS-219ENST00000461328 FGAP02671 866 aa18.23■□□□□ 0.51
VARS-219ENST00000461328 NEFLP07196 543 aa18.23■□□□□ 0.51
VARS-219ENST00000461328 ERCC3P19447 782 aa18.23■□□□□ 0.51
VARS-219ENST00000461328 UBE2Q1Q7Z7E8 422 aa18.23■□□□□ 0.51
VARS-219ENST00000461328 NCAPG2Q86XI2 1143 aa18.23■□□□□ 0.51
VARS-219ENST00000461328 NEDD1Q8NHV4 660 aa18.23■□□□□ 0.51
VARS-219ENST00000461328 NUP88Q99567 741 aaPredicted RBP18.23■□□□□ 0.51
VARS-219ENST00000461328 MROH8Q9H579 483 aa18.23■□□□□ 0.51
VARS-219ENST00000461328 MTMR4Q9NYA4 1195 aa18.23■□□□□ 0.51
VARS-219ENST00000461328 PPP1R9AQ9ULJ8 1098 aa18.23■□□□□ 0.51
VARS-219ENST00000461328 ZMYM6O95789 1325 aa18.23■□□□□ 0.51
VARS-219ENST00000461328 STRNO43815 780 aa18.22■□□□□ 0.51
VARS-219ENST00000461328 RANBP6O60518 1105 aaKnown RBP18.22■□□□□ 0.51
VARS-219ENST00000461328 TTLL1O95922 423 aa18.22■□□□□ 0.51
VARS-219ENST00000461328 HAND2P61296 217 aa18.22■□□□□ 0.51
VARS-219ENST00000461328 CACNB2Q08289 660 aaPredicted RBP18.22■□□□□ 0.51
VARS-219ENST00000461328 TMEM132BQ14DG7 1078 aa18.22■□□□□ 0.51
VARS-219ENST00000461328 RRP12Q5JTH9 1297 aaKnown RBP18.22■□□□□ 0.51
VARS-219ENST00000461328 MFSD14CQ5VZR4 134 aa18.22■□□□□ 0.51
VARS-219ENST00000461328 CENPQQ7L2Z9 268 aaPredicted RBP18.22■□□□□ 0.51
VARS-219ENST00000461328 DPP9Q86TI2 863 aa18.22■□□□□ 0.51
VARS-219ENST00000461328 LRRC47Q8N1G4 583 aaKnown RBP18.22■□□□□ 0.51
VARS-219ENST00000461328 DPF3Q92784 378 aa18.22■□□□□ 0.51
VARS-219ENST00000461328 HTATIP2Q9BUP3 242 aa18.22■□□□□ 0.51
VARS-219ENST00000461328 ANAPC4Q9UJX5 808 aa18.22■□□□□ 0.51
VARS-219ENST00000461328 ISY1Q9ULR0 285 aaKnown RBP18.22■□□□□ 0.51
VARS-219ENST00000461328 PARP14Q460N5 1801 aa18.21■□□□□ 0.51
VARS-219ENST00000461328 HOXC6P09630 235 aa18.21■□□□□ 0.51
VARS-219ENST00000461328 ADORA2AP29274 412 aa18.21■□□□□ 0.51
VARS-219ENST00000461328 PPP4R3BQ5MIZ7 849 aa18.21■□□□□ 0.51
VARS-219ENST00000461328 MKL1Q969V6 931 aa18.21■□□□□ 0.51
VARS-219ENST00000461328 SLF1Q9BQI6 1058 aa18.21■□□□□ 0.51
VARS-219ENST00000461328 SYNPO2Q9UMS6 1093 aa18.21■□□□□ 0.51
VARS-219ENST00000461328 ADAMTS5Q9UNA0 930 aa18.21■□□□□ 0.51
VARS-219ENST00000461328 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.21■□□□□ 0.51
VARS-219ENST00000461328 VWA5AO00534 786 aa18.2■□□□□ 0.5
VARS-219ENST00000461328 SLC25A27O95847 323 aa18.2■□□□□ 0.5
VARS-219ENST00000461328 NPLOC4Q8TAT6 608 aa18.2■□□□□ 0.5
VARS-219ENST00000461328 INCENPQ9NQS7 918 aa18.2■□□□□ 0.5
VARS-219ENST00000461328 FLRT1Q9NZU1 646 aa18.2■□□□□ 0.5
VARS-219ENST00000461328 STX8Q9UNK0 236 aa18.2■□□□□ 0.5
VARS-219ENST00000461328 ZNF236Q9UL36 1845 aa18.19■□□□□ 0.5
VARS-219ENST00000461328 FCER1AP12319 257 aa18.19■□□□□ 0.5
VARS-219ENST00000461328 CCND3P30281 292 aaPredicted RBP18.19■□□□□ 0.5
VARS-219ENST00000461328 ABRAQ8N0Z2 381 aa18.19■□□□□ 0.5
VARS-219ENST00000461328 ANKLE1Q8NAG6 615 aa18.19■□□□□ 0.5
VARS-219ENST00000461328 GMCL1P1Q8NEA9 526 aa18.19■□□□□ 0.5
VARS-219ENST00000461328 RUFY2Q8WXA3 655 aa18.19■□□□□ 0.5
VARS-219ENST00000461328 PAWRQ96IZ0 340 aaKnown RBP18.19■□□□□ 0.5
VARS-219ENST00000461328 SLC5A4Q9NY91 659 aa18.19■□□□□ 0.5
VARS-219ENST00000461328 MYH4Q9Y623 1939 aa18.19■□□□□ 0.5
VARS-219ENST00000461328 RAD50Q92878 1312 aa18.19■□□□□ 0.5
VARS-219ENST00000461328 ZNF213O14771 459 aa18.18■□□□□ 0.5
VARS-219ENST00000461328 ORC4O43929 436 aa18.18■□□□□ 0.5
VARS-219ENST00000461328 COPB2P35606 906 aa18.18■□□□□ 0.5
VARS-219ENST00000461328 STAT3P40763 770 aa18.18■□□□□ 0.5
VARS-219ENST00000461328 SLFN13Q68D06 897 aa18.18■□□□□ 0.5
VARS-219ENST00000461328 MFSD6Q6ZSS7 791 aa18.18■□□□□ 0.5
VARS-219ENST00000461328 NECAB2Q7Z6G3 386 aa18.18■□□□□ 0.5
VARS-219ENST00000461328 RIOX2Q8IUF8 465 aa18.18■□□□□ 0.5
VARS-219ENST00000461328 PRPF38AQ8NAV1 312 aaKnown RBP18.18■□□□□ 0.5
VARS-219ENST00000461328 CCDC136Q96JN2 1154 aa18.18■□□□□ 0.5
VARS-219ENST00000461328 DSCC1Q9BVC3 393 aa18.18■□□□□ 0.5
VARS-219ENST00000461328 RNF41Q9H4P4 317 aaPredicted RBP18.18■□□□□ 0.5
VARS-219ENST00000461328 ZNF214Q9UL59 606 aaPredicted RBP18.18■□□□□ 0.5
VARS-219ENST00000461328 OGDHLQ9ULD0 1010 aa18.18■□□□□ 0.5
VARS-219ENST00000461328 CTDP1Q9Y5B0 961 aaPredicted RBP18.18■□□□□ 0.5
VARS-219ENST00000461328 COL11A1P12107 1806 aaPredicted RBP18.17■□□□□ 0.5
VARS-219ENST00000461328 COBLO75128 1261 aa18.17■□□□□ 0.5
VARS-219ENST00000461328 CYP2C19P33261 490 aa18.17■□□□□ 0.5
VARS-219ENST00000461328 AKNAD1Q5T1N1 836 aa18.17■□□□□ 0.5
VARS-219ENST00000461328 OLFML2BQ68BL8 750 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms