RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 HIRIP3Q9BW71 556 aaPredicted RBP5.86□□□□□ -1.47
CLK1-206ENST00000461326 CWC22Q9HCG8 908 aaKnown RBP5.86□□□□□ -1.47
CLK1-206ENST00000461326 RTEL1Q9NZ71 1219 aa5.86□□□□□ -1.47
CLK1-206ENST00000461326 PAGE1O75459 146 aa5.85□□□□□ -1.47
CLK1-206ENST00000461326 PF4P02776 101 aa5.85□□□□□ -1.47
CLK1-206ENST00000461326 TFE3P19532 575 aaPredicted RBP5.85□□□□□ -1.47
CLK1-206ENST00000461326 APOBRQ0VD83 1088 aa5.85□□□□□ -1.47
CLK1-206ENST00000461326 INPP5AQ14642 412 aa5.85□□□□□ -1.47
CLK1-206ENST00000461326 NKG7Q16617 165 aa5.85□□□□□ -1.47
CLK1-206ENST00000461326 FBXL19Q6PCT2 694 aa5.85□□□□□ -1.47
CLK1-206ENST00000461326 GOLM1Q8NBJ4 401 aa5.85□□□□□ -1.47
CLK1-206ENST00000461326 CXorf38Q8TB03 319 aa5.85□□□□□ -1.47
CLK1-206ENST00000461326 SYTL4Q96C24 671 aaPredicted RBP5.85□□□□□ -1.47
CLK1-206ENST00000461326 TRIT1Q9H3H1 467 aaKnown RBP5.85□□□□□ -1.47
CLK1-206ENST00000461326 TLR6Q9Y2C9 796 aa5.85□□□□□ -1.47
CLK1-206ENST00000461326 KCTD3Q9Y597 815 aa5.85□□□□□ -1.47
CLK1-206ENST00000461326 TEX51A0A1B0GUA7 166 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 MYOCOSA0A1B0GUC4 107 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 FITM1A5D6W6 292 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 BPNT1O95861 308 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 CST3P01034 146 aaPredicted RBP5.84□□□□□ -1.47
CLK1-206ENST00000461326 GARTP22102 1010 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 TPP2P29144 1249 aaPredicted RBP5.84□□□□□ -1.47
CLK1-206ENST00000461326 SOX9P48436 509 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 MPP2Q14168 576 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 CWF19L2Q2TBE0 894 aaKnown RBP5.84□□□□□ -1.47
CLK1-206ENST00000461326 PRAMEF13Q5VWM6 474 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 PRRT2Q7Z6L0 340 aaPredicted RBP5.84□□□□□ -1.47
CLK1-206ENST00000461326 MCF2L2Q86YR7 1114 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 XAGE3Q8WTP9 111 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 GATAD2BQ8WXI9 593 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 PLPPR2Q96GM1 343 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 INTS4Q96HW7 963 aaKnown RBP5.84□□□□□ -1.47
CLK1-206ENST00000461326 PPP1R1BQ9UD71 204 aaPredicted RBP5.84□□□□□ -1.47
CLK1-206ENST00000461326 SNCAIPQ9Y6H5 919 aa5.84□□□□□ -1.47
CLK1-206ENST00000461326 STK10O94804 968 aaKnown RBP5.83□□□□□ -1.48
CLK1-206ENST00000461326 SASH1O94885 1247 aa5.83□□□□□ -1.48
CLK1-206ENST00000461326 ETV3P41162 512 aa5.83□□□□□ -1.48
CLK1-206ENST00000461326 FAM160A1Q05DH4 1040 aa5.83□□□□□ -1.48
CLK1-206ENST00000461326 SLITRK4Q8IW52 837 aa5.83□□□□□ -1.48
CLK1-206ENST00000461326 DHX38Q92620 1227 aaKnown RBP5.83□□□□□ -1.48
CLK1-206ENST00000461326 EAF1Q96JC9 268 aaPredicted RBP5.83□□□□□ -1.48
CLK1-206ENST00000461326 C19orf44Q9H6X5 657 aa5.83□□□□□ -1.48
CLK1-206ENST00000461326 SHROOM4Q9ULL8 1493 aa5.83□□□□□ -1.48
CLK1-206ENST00000461326 F6X3S4 739 aa5.82□□□□□ -1.48
CLK1-206ENST00000461326 TRIM13O60858 407 aa5.82□□□□□ -1.48
CLK1-206ENST00000461326 SSBP05455 408 aaKnown RBP eCLIP5.82□□□□□ -1.48
CLK1-206ENST00000461326 IMPDH2P12268 514 aa5.82□□□□□ -1.48
CLK1-206ENST00000461326 GTF2F1P35269 517 aaKnown RBP eCLIP5.82□□□□□ -1.48
CLK1-206ENST00000461326 PDE6BP35913 854 aa5.82□□□□□ -1.48
CLK1-206ENST00000461326 NR0B2Q15466 257 aa5.82□□□□□ -1.48
CLK1-206ENST00000461326 NBPF6Q5VWK0 638 aa5.82□□□□□ -1.48
CLK1-206ENST00000461326 CDH24Q86UP0 819 aa5.82□□□□□ -1.48
CLK1-206ENST00000461326 NKD1Q969G9 470 aa5.82□□□□□ -1.48
CLK1-206ENST00000461326 NBPF4Q96M43 638 aa5.82□□□□□ -1.48
CLK1-206ENST00000461326 ZNF552Q9H707 407 aaPredicted RBP5.82□□□□□ -1.48
CLK1-206ENST00000461326 SP110Q9HB58 689 aa5.82□□□□□ -1.48
CLK1-206ENST00000461326 DUSP13Q9UII6 198 aa5.82□□□□□ -1.48
CLK1-206ENST00000461326 YBX2Q9Y2T7 364 aaKnown RBP5.82□□□□□ -1.48
CLK1-206ENST00000461326 FAM221AA4D161 298 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 CILPO75339 1184 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 F13A1P00488 732 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 CELA3BP08861 270 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 ZGLP1P0C6A0 271 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 EGR3Q06889 387 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 RBL2Q08999 1139 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 WIPI1Q5MNZ9 446 aaPredicted RBP5.81□□□□□ -1.48
CLK1-206ENST00000461326 RASIP1Q5U651 963 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 SPPL2CQ8IUH8 684 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 REXO1Q8N1G1 1221 aaKnown RBP5.81□□□□□ -1.48
CLK1-206ENST00000461326 GAL3ST3Q96A11 431 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 GPATCH2Q9NW75 528 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 UBP1Q9NZI7 540 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 EFR3BQ9Y2G0 817 aa5.81□□□□□ -1.48
CLK1-206ENST00000461326 GRK4P32298 578 aa5.8□□□□□ -1.48
CLK1-206ENST00000461326 NASPP49321 788 aaPredicted RBP5.8□□□□□ -1.48
CLK1-206ENST00000461326 ZNF165P49910 485 aa5.8□□□□□ -1.48
CLK1-206ENST00000461326 RPL6Q02878 288 aaKnown RBP5.8□□□□□ -1.48
CLK1-206ENST00000461326 SNX17Q15036 470 aa5.8□□□□□ -1.48
CLK1-206ENST00000461326 SKOR2Q2VWA4 1001 aaPredicted RBP5.8□□□□□ -1.48
CLK1-206ENST00000461326 GAB4Q2WGN9 574 aa5.8□□□□□ -1.48
CLK1-206ENST00000461326 BNC2Q6ZN30 1099 aaPredicted RBP5.8□□□□□ -1.48
CLK1-206ENST00000461326 REC114Q7Z4M0 266 aa5.8□□□□□ -1.48
CLK1-206ENST00000461326 CKAP2LQ8IYA6 745 aa5.8□□□□□ -1.48
CLK1-206ENST00000461326 GCM1Q9NP62 436 aa5.8□□□□□ -1.48
CLK1-206ENST00000461326 TACC3Q9Y6A5 838 aa5.8□□□□□ -1.48
CLK1-206ENST00000461326 WASH4PA8MWX3 477 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 ADRB1P08588 477 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 LTKP29376 864 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 CRKP46108 304 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 CHRNEQ04844 493 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 SEPT6Q14141 434 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 TIGD5Q53EQ6 642 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 TNNI3KQ59H18 835 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 OR6P1Q8NGX9 317 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 SGPP1Q9BX95 441 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 XYLT2Q9H1B5 865 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 DUSP15Q9H1R2 295 aaPredicted RBP5.79□□□□□ -1.48
CLK1-206ENST00000461326 GINM1Q9NU53 330 aa5.79□□□□□ -1.48
CLK1-206ENST00000461326 GPR160Q9UJ42 338 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms