RNA–Protein interactions for RNA: ENST00000461249.1

GPN1-206, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best)

Gene GPN1, Length 969 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-206ENST00000461249 TM4SF4P48230 202 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 USP14P54578 494 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 HMGCS2P54868 508 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 SREBF2Q12772 1141 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 DGKZQ13574 1117 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 MOGSQ13724 837 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 KRT32Q14532 448 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 ZYXQ15942 572 aaKnown RBP9.5□□□□□ -0.89
GPN1-206ENST00000461249 ADCK5Q3MIX3 580 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 PPP4R3BQ5MIZ7 849 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 GADL1Q6ZQY3 521 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 FASTKD5Q7L8L6 764 aaKnown RBP9.5□□□□□ -0.89
GPN1-206ENST00000461249 PRRT2Q7Z6L0 340 aaPredicted RBP9.5□□□□□ -0.89
GPN1-206ENST00000461249 IQCA1Q86XH1 822 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 MB21D2Q8IYB1 491 aaPredicted RBP9.5□□□□□ -0.89
GPN1-206ENST00000461249 BRI3BPQ8WY22 251 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 MKL1Q969V6 931 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 NEK1Q96PY6 1258 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 ZSCAN10Q96SZ4 725 aaPredicted RBP9.5□□□□□ -0.89
GPN1-206ENST00000461249 FEZ1Q99689 392 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 PTPN18Q99952 460 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 KIAA1683Q9H0B3 1180 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 TMOD4Q9NZQ9 345 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 STX8Q9UNK0 236 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 TMX2Q9Y320 296 aa9.5□□□□□ -0.89
GPN1-206ENST00000461249 GREB1LQ9C091 1923 aaPredicted RBP9.5□□□□□ -0.89
GPN1-206ENST00000461249 BTBD19C9JJ37 291 aa9.49□□□□□ -0.89
GPN1-206ENST00000461249 MCM5P33992 734 aa9.49□□□□□ -0.89
GPN1-206ENST00000461249 NOVP48745 357 aa9.49□□□□□ -0.89
GPN1-206ENST00000461249 MDM2Q00987 491 aaPredicted RBP9.49□□□□□ -0.89
GPN1-206ENST00000461249 CCDC178Q5BJE1 867 aa9.49□□□□□ -0.89
GPN1-206ENST00000461249 CHST3Q7LGC8 479 aa9.49□□□□□ -0.89
GPN1-206ENST00000461249 JAKMIP1Q96N16 626 aaKnown RBP9.49□□□□□ -0.89
GPN1-206ENST00000461249 TTC14Q96N46 770 aa9.49□□□□□ -0.89
GPN1-206ENST00000461249 UBAC1Q9BSL1 405 aa9.49□□□□□ -0.89
GPN1-206ENST00000461249 TMUB1Q9BVT8 246 aa9.49□□□□□ -0.89
GPN1-206ENST00000461249 SH2D4AQ9H788 454 aa9.49□□□□□ -0.89
GPN1-206ENST00000461249 F5H6K3 240 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 IGF2BP3O00425 579 aaKnown RBP eCLIP9.48□□□□□ -0.89
GPN1-206ENST00000461249 IFIT3O14879 490 aaKnown RBP9.48□□□□□ -0.89
GPN1-206ENST00000461249 PRC1O43663 620 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 RAD21O60216 631 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 TOP1P11387 765 aaKnown RBP9.48□□□□□ -0.89
GPN1-206ENST00000461249 PSMA5P28066 241 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 CLCN1P35523 988 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 ANTXR2P58335 489 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 KLRC3Q07444 240 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 COL9A3Q14050 684 aaPredicted RBP9.48□□□□□ -0.89
GPN1-206ENST00000461249 KIAA1755Q5JYT7 1200 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 TREML2Q5T2D2 321 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 OTUD7BQ6GQQ9 843 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 RCSD1Q6JBY9 416 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 GPAT2Q6NUI2 795 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 DHX32Q7L7V1 743 aaKnown RBP9.48□□□□□ -0.89
GPN1-206ENST00000461249 ANKRD23Q86SG2 305 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 DGKHQ86XP1 1220 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 LRRC47Q8N1G4 583 aaKnown RBP9.48□□□□□ -0.89
GPN1-206ENST00000461249 FAM43AQ8N2R8 423 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 ENAHQ8N8S7 591 aaPredicted RBP9.48□□□□□ -0.89
GPN1-206ENST00000461249 PROCA1Q8NCQ7 364 aaPredicted RBP9.48□□□□□ -0.89
GPN1-206ENST00000461249 ANKS1AQ92625 1134 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 C12orf42Q96LP6 360 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 TMEM47Q9BQJ4 181 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 BACH2Q9BYV9 841 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 VCPKMTQ9H867 229 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 GPCPD1Q9NPB8 672 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 TNKSO95271 1327 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 PTPRFP10586 1907 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 MYH4Q9Y623 1939 aa9.48□□□□□ -0.89
GPN1-206ENST00000461249 ERICH2A1L162 156 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 PDHXO00330 501 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 HMGB1P09429 215 aaKnown RBP9.47□□□□□ -0.89
GPN1-206ENST00000461249 CPA1P15085 419 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 ANAPC15P60006 121 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 EXOSC10Q01780 885 aaKnown RBP9.47□□□□□ -0.89
GPN1-206ENST00000461249 MAP2K1Q02750 393 aaPredicted RBP9.47□□□□□ -0.89
GPN1-206ENST00000461249 WTAPQ15007 396 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 SART3Q15020 963 aaKnown RBP9.47□□□□□ -0.89
GPN1-206ENST00000461249 SEC23AQ15436 765 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 TMEM67Q5HYA8 995 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 SLFN13Q68D06 897 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 SPICE1Q8N0Z3 855 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 GMCL1P1Q8NEA9 526 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 IGDCC4Q8TDY8 1250 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 LPAR1Q92633 364 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 CHMP4CQ96CF2 233 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 PHOX2BQ99453 314 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 MTA3Q9BTC8 594 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 LRRC2Q9BYS8 371 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 KAT14Q9H8E8 782 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 SYNPO2Q9UMS6 1093 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 AGTPBP1Q9UPW5 1226 aa9.47□□□□□ -0.89
GPN1-206ENST00000461249 USP17L15C9J2P7 530 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 USP17L13C9JLJ4 530 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 USP17L11C9JVI0 530 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 USP17L18D6R9N7 530 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 USP17L22D6RA61 530 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 USP17L17D6RBQ6 530 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 USP17L19D6RCP7 530 aa9.46□□□□□ -0.9
GPN1-206ENST00000461249 USP17L20D6RJB6 530 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms