RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 SIAH1Q8IUQ4 282 aa17.55■□□□□ 0.4
DNMT3A-207ENST00000461228 ATG4CQ96DT6 458 aa17.55■□□□□ 0.4
DNMT3A-207ENST00000461228 KANSL2Q9H9L4 492 aa17.55■□□□□ 0.4
DNMT3A-207ENST00000461228 ARPP21Q9UBL0 812 aaPredicted RBP17.55■□□□□ 0.4
DNMT3A-207ENST00000461228 ZNF214Q9UL59 606 aaPredicted RBP17.55■□□□□ 0.4
DNMT3A-207ENST00000461228 ATP11BQ9Y2G3 1177 aa17.55■□□□□ 0.4
DNMT3A-207ENST00000461228 SYNGAP1Q96PV0 1343 aa17.54■□□□□ 0.4
DNMT3A-207ENST00000461228 GOLIM4O00461 696 aa17.54■□□□□ 0.4
DNMT3A-207ENST00000461228 RARBP10826 455 aa17.54■□□□□ 0.4
DNMT3A-207ENST00000461228 KIAA1755Q5JYT7 1200 aa17.54■□□□□ 0.4
DNMT3A-207ENST00000461228 RNF180Q86T96 592 aa17.54■□□□□ 0.4
DNMT3A-207ENST00000461228 SLC44A5Q8NCS7 719 aa17.54■□□□□ 0.4
DNMT3A-207ENST00000461228 DDRGK1Q96HY6 314 aa17.54■□□□□ 0.4
DNMT3A-207ENST00000461228 COL25A1Q9BXS0 654 aaPredicted RBP17.54■□□□□ 0.4
DNMT3A-207ENST00000461228 GOPCQ9HD26 462 aa17.54■□□□□ 0.4
DNMT3A-207ENST00000461228 PAG1Q9NWQ8 432 aa17.54■□□□□ 0.4
DNMT3A-207ENST00000461228 PPP1R9AQ9ULJ8 1098 aa17.54■□□□□ 0.4
DNMT3A-207ENST00000461228 ATP2A1O14983 1001 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 KIAA0355O15063 1070 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 IFIT2P09913 472 aaKnown RBP17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 AKR1A1P14550 325 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 AKR1B1P15121 316 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 ATP5JP18859 108 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 KCTD2Q14681 263 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 TMEM132BQ14DG7 1078 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 ANKRD33Q7Z3H0 272 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 ZNF467Q7Z7K2 595 aaPredicted RBP17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 NCAPG2Q86XI2 1143 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 REPS2Q8NFH8 660 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 TOX2Q96NM4 488 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 TINF2Q9BSI4 451 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 TSEN34Q9BSV6 310 aaKnown RBP17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 IL1RAPL2Q9NP60 686 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 XPNPEP3Q9NQH7 507 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 DDX19BQ9UMR2 479 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 TACC3Q9Y6A5 838 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 MCM3APO60318 1980 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 PLIN4Q96Q06 1357 aa17.53■□□□□ 0.4
DNMT3A-207ENST00000461228 MOXD2PA6NHM9 499 aa17.52■□□□□ 0.4
DNMT3A-207ENST00000461228 VWA5AO00534 786 aa17.52■□□□□ 0.4
DNMT3A-207ENST00000461228 MBD4O95243 580 aa17.52■□□□□ 0.4
DNMT3A-207ENST00000461228 CLTBP09497 229 aa17.52■□□□□ 0.4
DNMT3A-207ENST00000461228 CST5P28325 142 aaPredicted RBP17.52■□□□□ 0.4
DNMT3A-207ENST00000461228 EVX2Q03828 476 aa17.52■□□□□ 0.4
DNMT3A-207ENST00000461228 ZNF792Q3KQV3 632 aa17.52■□□□□ 0.4
DNMT3A-207ENST00000461228 MMP19Q99542 508 aa17.52■□□□□ 0.4
DNMT3A-207ENST00000461228 DNAJC2Q99543 621 aaKnown RBP17.52■□□□□ 0.4
DNMT3A-207ENST00000461228 HAUS7Q99871 368 aa17.52■□□□□ 0.4
DNMT3A-207ENST00000461228 CHD9Q3L8U1 2897 aa17.52■□□□□ 0.39
DNMT3A-207ENST00000461228 NCOR1O75376 2440 aa17.51■□□□□ 0.39
DNMT3A-207ENST00000461228 MROH7Q68CQ1 1323 aa17.51■□□□□ 0.39
DNMT3A-207ENST00000461228 ADAMTS4O75173 837 aa17.51■□□□□ 0.39
DNMT3A-207ENST00000461228 ADCYAP1R1P41586 468 aa17.51■□□□□ 0.39
DNMT3A-207ENST00000461228 CDK8P49336 464 aa17.51■□□□□ 0.39
DNMT3A-207ENST00000461228 SHHQ15465 462 aa17.51■□□□□ 0.39
DNMT3A-207ENST00000461228 ZSCAN25Q6NSZ9 544 aa17.51■□□□□ 0.39
DNMT3A-207ENST00000461228 GIMAP6Q6P9H5 292 aa17.51■□□□□ 0.39
DNMT3A-207ENST00000461228 MAMDC4Q6UXC1 1216 aa17.51■□□□□ 0.39
DNMT3A-207ENST00000461228 TEX13BQ9BXU2 312 aa17.51■□□□□ 0.39
DNMT3A-207ENST00000461228 ARMT1Q9H993 441 aa17.51■□□□□ 0.39
DNMT3A-207ENST00000461228 A0A1W2PQ45 241 aaPredicted RBP17.5■□□□□ 0.39
DNMT3A-207ENST00000461228 A0A1W2PQY0 241 aa17.5■□□□□ 0.39
DNMT3A-207ENST00000461228 CYP2D6P10635 497 aa17.5■□□□□ 0.39
DNMT3A-207ENST00000461228 PLS1Q14651 629 aa17.5■□□□□ 0.39
DNMT3A-207ENST00000461228 C9orf50Q5SZB4 431 aa17.5■□□□□ 0.39
DNMT3A-207ENST00000461228 SPICE1Q8N0Z3 855 aa17.5■□□□□ 0.39
DNMT3A-207ENST00000461228 BADQ92934 168 aa17.5■□□□□ 0.39
DNMT3A-207ENST00000461228 CDX2Q99626 313 aaPredicted RBP17.5■□□□□ 0.39
DNMT3A-207ENST00000461228 PRDM5Q9NQX1 630 aaPredicted RBP17.5■□□□□ 0.39
DNMT3A-207ENST00000461228 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
DNMT3A-207ENST00000461228 CNPY2Q9Y2B0 182 aa17.5■□□□□ 0.39
DNMT3A-207ENST00000461228 TRIM43BA6NCK2 446 aa17.49■□□□□ 0.39
DNMT3A-207ENST00000461228 ZNF865P0CJ78 1059 aaPredicted RBP17.49■□□□□ 0.39
DNMT3A-207ENST00000461228 EEF2P13639 858 aaKnown RBP17.49■□□□□ 0.39
DNMT3A-207ENST00000461228 STAT3P40763 770 aa17.49■□□□□ 0.39
DNMT3A-207ENST00000461228 HNRNPUQ00839 825 aaKnown RBP eCLIP17.49■□□□□ 0.39
DNMT3A-207ENST00000461228 SBK1Q52WX2 424 aa17.49■□□□□ 0.39
DNMT3A-207ENST00000461228 CLEC10AQ8IUN9 316 aa17.49■□□□□ 0.39
DNMT3A-207ENST00000461228 MAFAQ8NHW3 353 aaPredicted RBP17.49■□□□□ 0.39
DNMT3A-207ENST00000461228 TRIM43Q96BQ3 446 aaPredicted RBP17.49■□□□□ 0.39
DNMT3A-207ENST00000461228 DYNLL2Q96FJ2 89 aa17.49■□□□□ 0.39
DNMT3A-207ENST00000461228 SYNRGQ9UMZ2 1314 aa17.48■□□□□ 0.39
DNMT3A-207ENST00000461228 DNAJC25-GNG10A0A024R161 153 aa17.48■□□□□ 0.39
DNMT3A-207ENST00000461228 TLE2Q04725 743 aa17.48■□□□□ 0.39
DNMT3A-207ENST00000461228 NUP133Q8WUM0 1156 aa17.48■□□□□ 0.39
DNMT3A-207ENST00000461228 TTYH1Q9H313 450 aaPredicted RBP17.48■□□□□ 0.39
DNMT3A-207ENST00000461228 SEMA6BQ9H3T3 888 aa17.48■□□□□ 0.39
DNMT3A-207ENST00000461228 CHD7Q9P2D1 2997 aa17.48■□□□□ 0.39
DNMT3A-207ENST00000461228 ELP1O95163 1332 aa17.47■□□□□ 0.39
DNMT3A-207ENST00000461228 USP17L12C9JPN9 530 aa17.47■□□□□ 0.39
DNMT3A-207ENST00000461228 USP17L21D6R901 530 aa17.47■□□□□ 0.39
DNMT3A-207ENST00000461228 OAZ1P54368 228 aa17.47■□□□□ 0.39
DNMT3A-207ENST00000461228 NKX3-2P78367 333 aa17.47■□□□□ 0.39
DNMT3A-207ENST00000461228 CCSAPQ6IQ19 270 aaPredicted RBP17.47■□□□□ 0.39
DNMT3A-207ENST00000461228 SIRT2Q8IXJ6 389 aa17.47■□□□□ 0.39
DNMT3A-207ENST00000461228 PANK1Q8TE04 598 aa17.47■□□□□ 0.39
DNMT3A-207ENST00000461228 SLF1Q9BQI6 1058 aa17.47■□□□□ 0.39
DNMT3A-207ENST00000461228 NYAP2Q9P242 653 aa17.47■□□□□ 0.39
DNMT3A-207ENST00000461228 PRKAB2O43741 272 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms