RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 INHAP05111 366 aa26.64■■□□□ 1.86
TRAF4-207ENST00000461195 HAND2P61296 217 aa26.64■■□□□ 1.86
TRAF4-207ENST00000461195 WDR78Q5VTH9 848 aa26.64■■□□□ 1.86
TRAF4-207ENST00000461195 CENPQQ7L2Z9 268 aaPredicted RBP26.64■■□□□ 1.86
TRAF4-207ENST00000461195 TOMM22Q9NS69 142 aa26.64■■□□□ 1.86
TRAF4-207ENST00000461195 FBXO28Q9NVF7 368 aa26.64■■□□□ 1.86
TRAF4-207ENST00000461195 LAMA4Q16363 1823 aa26.63■■□□□ 1.85
TRAF4-207ENST00000461195 CCL5P13501 91 aa26.63■■□□□ 1.85
TRAF4-207ENST00000461195 EN2P19622 333 aaPredicted RBP26.63■■□□□ 1.85
TRAF4-207ENST00000461195 CYP2B6P20813 491 aa26.63■■□□□ 1.85
TRAF4-207ENST00000461195 MORN1Q5T089 497 aa26.63■■□□□ 1.85
TRAF4-207ENST00000461195 LRRC47Q8N1G4 583 aaKnown RBP26.63■■□□□ 1.85
TRAF4-207ENST00000461195 GMCL1P1Q8NEA9 526 aa26.63■■□□□ 1.85
TRAF4-207ENST00000461195 NUP88Q99567 741 aaPredicted RBP26.63■■□□□ 1.85
TRAF4-207ENST00000461195 DSCC1Q9BVC3 393 aa26.63■■□□□ 1.85
TRAF4-207ENST00000461195 SPATC1LQ9H0A9 340 aa26.63■■□□□ 1.85
TRAF4-207ENST00000461195 PPP1R9AQ9ULJ8 1098 aa26.63■■□□□ 1.85
TRAF4-207ENST00000461195 COL11A1P12107 1806 aaPredicted RBP26.62■■□□□ 1.85
TRAF4-207ENST00000461195 BRCA2P51587 3418 aa26.62■■□□□ 1.85
TRAF4-207ENST00000461195 PCP11498 1178 aaKnown RBP26.62■■□□□ 1.85
TRAF4-207ENST00000461195 XRCC5P13010 732 aaKnown RBP26.62■■□□□ 1.85
TRAF4-207ENST00000461195 RRP12Q5JTH9 1297 aaKnown RBP26.62■■□□□ 1.85
TRAF4-207ENST00000461195 USP6NLQ92738 828 aa26.62■■□□□ 1.85
TRAF4-207ENST00000461195 MOV10L1Q9BXT6 1211 aaKnown RBP26.62■■□□□ 1.85
TRAF4-207ENST00000461195 ADAMTS5Q9UNA0 930 aa26.62■■□□□ 1.85
TRAF4-207ENST00000461195 IVNS1ABPQ9Y6Y0 642 aa26.62■■□□□ 1.85
TRAF4-207ENST00000461195 ZNF213O14771 459 aa26.61■■□□□ 1.85
TRAF4-207ENST00000461195 HMGCRP04035 888 aa26.61■■□□□ 1.85
TRAF4-207ENST00000461195 RGS2P41220 211 aa26.61■■□□□ 1.85
TRAF4-207ENST00000461195 PLS1Q14651 629 aa26.61■■□□□ 1.85
TRAF4-207ENST00000461195 AKNAD1Q5T1N1 836 aa26.61■■□□□ 1.85
TRAF4-207ENST00000461195 MFSD6Q6ZSS7 791 aa26.61■■□□□ 1.85
TRAF4-207ENST00000461195 SHCBP1Q8NEM2 672 aa26.61■■□□□ 1.85
TRAF4-207ENST00000461195 STAG1Q8WVM7 1258 aa26.61■■□□□ 1.85
TRAF4-207ENST00000461195 RNF208Q9H0X6 261 aa26.61■■□□□ 1.85
TRAF4-207ENST00000461195 IL17RBQ9NRM6 502 aa26.61■■□□□ 1.85
TRAF4-207ENST00000461195 STX8Q9UNK0 236 aa26.61■■□□□ 1.85
TRAF4-207ENST00000461195 RAD50Q92878 1312 aa26.61■■□□□ 1.85
TRAF4-207ENST00000461195 SLC15A5A6NIM6 579 aa26.6■■□□□ 1.85
TRAF4-207ENST00000461195 PTPREP23469 700 aa26.6■■□□□ 1.85
TRAF4-207ENST00000461195 SLFN13Q68D06 897 aa26.6■■□□□ 1.85
TRAF4-207ENST00000461195 RUFY2Q8WXA3 655 aa26.6■■□□□ 1.85
TRAF4-207ENST00000461195 SLF1Q9BQI6 1058 aa26.6■■□□□ 1.85
TRAF4-207ENST00000461195 NBPF3Q9H094 633 aa26.6■■□□□ 1.85
TRAF4-207ENST00000461195 UNC93B1Q9H1C4 597 aa26.6■■□□□ 1.85
TRAF4-207ENST00000461195 RNF41Q9H4P4 317 aaPredicted RBP26.6■■□□□ 1.85
TRAF4-207ENST00000461195 VWA5AO00534 786 aa26.59■■□□□ 1.85
TRAF4-207ENST00000461195 NMT2O60551 498 aa26.59■■□□□ 1.85
TRAF4-207ENST00000461195 CHMLP26374 656 aa26.59■■□□□ 1.85
TRAF4-207ENST00000461195 MAP2K5Q13163 448 aa26.59■■□□□ 1.85
TRAF4-207ENST00000461195 TMEM132BQ14DG7 1078 aa26.59■■□□□ 1.85
TRAF4-207ENST00000461195 TBC1D10CQ8IV04 446 aa26.59■■□□□ 1.85
TRAF4-207ENST00000461195 TRMT44Q8IYL2 757 aaKnown RBP26.59■■□□□ 1.85
TRAF4-207ENST00000461195 IL25Q9H293 177 aa26.59■■□□□ 1.85
TRAF4-207ENST00000461195 CTNNA3Q9UI47 895 aa26.59■■□□□ 1.85
TRAF4-207ENST00000461195 GJB1P08034 283 aa26.58■■□□□ 1.85
TRAF4-207ENST00000461195 ERCC3P19447 782 aa26.58■■□□□ 1.85
TRAF4-207ENST00000461195 PRPF38AQ8NAV1 312 aaKnown RBP26.58■■□□□ 1.85
TRAF4-207ENST00000461195 NKX2-3Q8TAU0 364 aa26.58■■□□□ 1.85
TRAF4-207ENST00000461195 TRIB2Q92519 343 aa26.58■■□□□ 1.85
TRAF4-207ENST00000461195 APBA2Q99767 749 aa26.58■■□□□ 1.85
TRAF4-207ENST00000461195 MROH8Q9H579 483 aa26.58■■□□□ 1.85
TRAF4-207ENST00000461195 BMP3P12645 472 aa26.57■■□□□ 1.84
TRAF4-207ENST00000461195 NOVP48745 357 aa26.57■■□□□ 1.84
TRAF4-207ENST00000461195 GRB14Q14449 540 aa26.57■■□□□ 1.84
TRAF4-207ENST00000461195 TCP11L1Q9NUJ3 509 aa26.57■■□□□ 1.84
TRAF4-207ENST00000461195 FEM1BQ9UK73 627 aa26.57■■□□□ 1.84
TRAF4-207ENST00000461195 STRNO43815 780 aa26.56■■□□□ 1.84
TRAF4-207ENST00000461195 SLC25A27O95847 323 aa26.56■■□□□ 1.84
TRAF4-207ENST00000461195 ZKSCAN1P17029 563 aaPredicted RBP26.56■■□□□ 1.84
TRAF4-207ENST00000461195 GJA8P48165 433 aa26.56■■□□□ 1.84
TRAF4-207ENST00000461195 IMMTQ16891 758 aaKnown RBP26.56■■□□□ 1.84
TRAF4-207ENST00000461195 NCAPG2Q86XI2 1143 aa26.56■■□□□ 1.84
TRAF4-207ENST00000461195 GMCL1Q96IK5 515 aa26.56■■□□□ 1.84
TRAF4-207ENST00000461195 ZNF236Q9UL36 1845 aa26.55■■□□□ 1.84
TRAF4-207ENST00000461195 NT5C2P49902 561 aa26.55■■□□□ 1.84
TRAF4-207ENST00000461195 REPS2Q8NFH8 660 aa26.55■■□□□ 1.84
TRAF4-207ENST00000461195 ESR2Q92731 530 aa26.55■■□□□ 1.84
TRAF4-207ENST00000461195 STAT3P40763 770 aa26.54■■□□□ 1.84
TRAF4-207ENST00000461195 SLC1A4P43007 532 aa26.54■■□□□ 1.84
TRAF4-207ENST00000461195 TRIM32Q13049 653 aa26.54■■□□□ 1.84
TRAF4-207ENST00000461195 HABP4Q5JVS0 413 aaKnown RBP26.54■■□□□ 1.84
TRAF4-207ENST00000461195 RIOX2Q8IUF8 465 aa26.54■■□□□ 1.84
TRAF4-207ENST00000461195 KIFC2Q96AC6 838 aa26.54■■□□□ 1.84
TRAF4-207ENST00000461195 ZNF214Q9UL59 606 aaPredicted RBP26.54■■□□□ 1.84
TRAF4-207ENST00000461195 ISY1Q9ULR0 285 aaKnown RBP26.54■■□□□ 1.84
TRAF4-207ENST00000461195 NEDD4P46934 1319 aa26.54■■□□□ 1.84
TRAF4-207ENST00000461195 HOXC6P09630 235 aa26.53■■□□□ 1.84
TRAF4-207ENST00000461195 MCCP23508 829 aa26.53■■□□□ 1.84
TRAF4-207ENST00000461195 COPB2P35606 906 aa26.53■■□□□ 1.84
TRAF4-207ENST00000461195 CCL14Q16627 93 aa26.53■■□□□ 1.84
TRAF4-207ENST00000461195 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.53■■□□□ 1.849e-7■■■□□ 14.7
TRAF4-207ENST00000461195 PAK6Q9NQU5 681 aaPredicted RBP26.53■■□□□ 1.84
TRAF4-207ENST00000461195 CTDP1Q9Y5B0 961 aaPredicted RBP26.53■■□□□ 1.84
TRAF4-207ENST00000461195 RPTORQ8N122 1335 aa26.53■■□□□ 1.84
TRAF4-207ENST00000461195 TMEM232C9JQI7 657 aa26.52■■□□□ 1.84
TRAF4-207ENST00000461195 ZBED4O75132 1171 aa26.52■■□□□ 1.84
TRAF4-207ENST00000461195 TOP1P11387 765 aaKnown RBP26.52■■□□□ 1.84
TRAF4-207ENST00000461195 ADORA2AP29274 412 aa26.52■■□□□ 1.84
TRAF4-207ENST00000461195 DPP9Q86TI2 863 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms