RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 KIAA1755Q5JYT7 1200 aa16.19■□□□□ 0.18
CHRD-209ENST00000461120 BLOC1S2Q6QNY1 142 aa16.19■□□□□ 0.18
CHRD-209ENST00000461120 PROCA1Q8NCQ7 364 aaPredicted RBP16.19■□□□□ 0.18
CHRD-209ENST00000461120 PTPN18Q99952 460 aa16.19■□□□□ 0.18
CHRD-209ENST00000461120 TMEM47Q9BQJ4 181 aa16.19■□□□□ 0.18
CHRD-209ENST00000461120 MTA3Q9BTC8 594 aa16.19■□□□□ 0.18
CHRD-209ENST00000461120 TM6SF1Q9BZW5 370 aa16.19■□□□□ 0.18
CHRD-209ENST00000461120 EFCC1Q9HA90 598 aa16.19■□□□□ 0.18
CHRD-209ENST00000461120 UPF2Q9HAU5 1272 aaKnown RBP16.19■□□□□ 0.18
CHRD-209ENST00000461120 WDR19Q8NEZ3 1342 aa16.19■□□□□ 0.18
CHRD-209ENST00000461120 BTBD19C9JJ37 291 aa16.18■□□□□ 0.18
CHRD-209ENST00000461120 IGF2BP3O00425 579 aaKnown RBP eCLIP16.18■□□□□ 0.18
CHRD-209ENST00000461120 CPA1P15085 419 aa16.18■□□□□ 0.18
CHRD-209ENST00000461120 CASTP20810 708 aaKnown RBP16.18■□□□□ 0.18
CHRD-209ENST00000461120 ARHGEF6Q15052 776 aa16.18■□□□□ 0.18
CHRD-209ENST00000461120 TMEM67Q5HYA8 995 aa16.18■□□□□ 0.18
CHRD-209ENST00000461120 GPAT2Q6NUI2 795 aa16.18■□□□□ 0.18
CHRD-209ENST00000461120 DEFB123Q8N688 67 aa16.18■□□□□ 0.18
CHRD-209ENST00000461120 IGDCC4Q8TDY8 1250 aa16.18■□□□□ 0.18
CHRD-209ENST00000461120 TMEM87BQ96K49 555 aa16.18■□□□□ 0.18
CHRD-209ENST00000461120 HTATIP2Q9BUP3 242 aa16.18■□□□□ 0.18
CHRD-209ENST00000461120 ZSWIM6Q9HCJ5 1215 aa16.18■□□□□ 0.18
CHRD-209ENST00000461120 GOPCQ9HD26 462 aa16.18■□□□□ 0.18
CHRD-209ENST00000461120 GPHNQ9NQX3 736 aaPredicted RBP16.18■□□□□ 0.18
CHRD-209ENST00000461120 LAMA3Q16787 3333 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 ERICH2A1L162 156 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 F5H6K3 240 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 SH2B2O14492 632 aaPredicted RBP16.17■□□□□ 0.18
CHRD-209ENST00000461120 VCAM1P19320 739 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 COL9A1P20849 921 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 RPS6KB1P23443 525 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 RBM25P49756 843 aaKnown RBP16.17■□□□□ 0.18
CHRD-209ENST00000461120 KLRC3Q07444 240 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 WTAPQ15007 396 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 SLC9C1Q4G0N8 1177 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 TREML2Q5T2D2 321 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 IFIT1BQ5T764 474 aaKnown RBP16.17■□□□□ 0.18
CHRD-209ENST00000461120 ANKRD23Q86SG2 305 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 IFNL1Q8IU54 200 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 SPICE1Q8N0Z3 855 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 FAM43AQ8N2R8 423 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 GMCL1P1Q8NEA9 526 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 LPAR1Q92633 364 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 LRCH3Q96II8 777 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 ZNF333Q96JL9 665 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 TCEANC2Q96MN5 208 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 LRRC2Q9BYS8 371 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 KAT14Q9H8E8 782 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 SENP2Q9HC62 589 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 AGTPBP1Q9UPW5 1226 aa16.17■□□□□ 0.18
CHRD-209ENST00000461120 RAD21O60216 631 aa16.16■□□□□ 0.18
CHRD-209ENST00000461120 NDUFB10O96000 172 aa16.16■□□□□ 0.18
CHRD-209ENST00000461120 SLFN13Q68D06 897 aa16.16■□□□□ 0.18
CHRD-209ENST00000461120 RUFY3Q7L099 469 aa16.16■□□□□ 0.18
CHRD-209ENST00000461120 PRO3102Q9H379 93 aa16.16■□□□□ 0.18
CHRD-209ENST00000461120 R3HDMLQ9H3Y0 253 aa16.16■□□□□ 0.18
CHRD-209ENST00000461120 LY9Q9HBG7 655 aa16.16■□□□□ 0.18
CHRD-209ENST00000461120 CYP46A1Q9Y6A2 500 aa16.16■□□□□ 0.18
CHRD-209ENST00000461120 PDHXO00330 501 aa16.15■□□□□ 0.18
CHRD-209ENST00000461120 WDR46O15213 610 aaKnown RBP16.15■□□□□ 0.18
CHRD-209ENST00000461120 LIFRP42702 1097 aa16.15■□□□□ 0.18
CHRD-209ENST00000461120 OTUD7BQ6GQQ9 843 aa16.15■□□□□ 0.18
CHRD-209ENST00000461120 PNMA1Q8ND90 353 aa16.15■□□□□ 0.18
CHRD-209ENST00000461120 TBC1D32Q96NH3 1257 aa16.15■□□□□ 0.18
CHRD-209ENST00000461120 UPF3BQ9BZI7 483 aaKnown RBP16.15■□□□□ 0.18
CHRD-209ENST00000461120 ZCCHC17Q9NP64 241 aaKnown RBP16.15■□□□□ 0.18
CHRD-209ENST00000461120 SLC45A1Q9Y2W3 748 aa16.15■□□□□ 0.18
CHRD-209ENST00000461120 VCANP13611 3396 aa16.15■□□□□ 0.18
CHRD-209ENST00000461120 USP17L15C9J2P7 530 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 USP17L13C9JLJ4 530 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 USP17L11C9JVI0 530 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 USP17L18D6R9N7 530 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 USP17L22D6RA61 530 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 USP17L17D6RBQ6 530 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 USP17L19D6RCP7 530 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 USP17L20D6RJB6 530 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 SOX1O00570 391 aaPredicted RBP16.14■□□□□ 0.17
CHRD-209ENST00000461120 HOXA7P31268 230 aaPredicted RBP16.14■□□□□ 0.17
CHRD-209ENST00000461120 USP17L24Q0WX57 530 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 PABPC4Q13310 644 aaKnown RBP eCLIP16.14■□□□□ 0.17
CHRD-209ENST00000461120 Q6ZUG5 572 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 RASGRP2Q7LDG7 609 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 TMTC2Q8N394 836 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 GMCL1Q96IK5 515 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 NUP88Q99567 741 aaPredicted RBP16.14■□□□□ 0.17
CHRD-209ENST00000461120 KIF2CQ99661 725 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 RPAP3Q9H6T3 665 aaPredicted RBP16.14■□□□□ 0.17
CHRD-209ENST00000461120 MTMR7Q9Y216 660 aa16.14■□□□□ 0.17
CHRD-209ENST00000461120 FAM83BQ5T0W9 1011 aa16.13■□□□□ 0.17
CHRD-209ENST00000461120 CATSPERGQ6ZRH7 1159 aa16.13■□□□□ 0.17
CHRD-209ENST00000461120 FBXL16Q8N461 479 aa16.13■□□□□ 0.17
CHRD-209ENST00000461120 DCAF4Q8WV16 495 aa16.13■□□□□ 0.17
CHRD-209ENST00000461120 CHMP4CQ96CF2 233 aa16.13■□□□□ 0.17
CHRD-209ENST00000461120 CCDC69A6NI79 296 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 SNHG28P0DPA3 235 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 PDHBP11177 359 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 BMP3P12645 472 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 OSBPP22059 807 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 SLC1A4P43007 532 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 FGD1P98174 961 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms