RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 SUSD4Q5VX71 490 aa7.11□□□□□ -1.27
PTPN12-209ENST00000460731 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.11□□□□□ -1.27
PTPN12-209ENST00000460731 ZBTB38Q8NAP3 1195 aaPredicted RBP7.11□□□□□ -1.27
PTPN12-209ENST00000460731 PLA2G12BQ9BX93 195 aa7.11□□□□□ -1.27
PTPN12-209ENST00000460731 SRCIN1Q9C0H9 1055 aa7.11□□□□□ -1.27
PTPN12-209ENST00000460731 ADGRE2Q9UHX3 823 aa7.11□□□□□ -1.27
PTPN12-209ENST00000460731 NIP7Q9Y221 180 aaKnown RBP eCLIP7.11□□□□□ -1.27
PTPN12-209ENST00000460731 MAFBQ9Y5Q3 323 aaPredicted RBP7.11□□□□□ -1.27
PTPN12-209ENST00000460731 N4BP2Q86UW6 1770 aaPredicted RBP7.1□□□□□ -1.27
PTPN12-209ENST00000460731 CARMIL3Q8ND23 1372 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 CDHR2Q9BYE9 1310 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 GRM8O00222 908 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 SERPINB2P05120 415 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 MMP10P09238 476 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 GRIK1P39086 918 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 DPYDQ12882 1025 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 CWF19L2Q2TBE0 894 aaKnown RBP7.1□□□□□ -1.27
PTPN12-209ENST00000460731 CRY2Q49AN0 593 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 TPTE2Q6XPS3 522 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 PPP1R42Q7Z4L9 355 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 TRIM42Q8IWZ5 723 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 KAZALD1Q96I82 304 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 NSUN5Q96P11 429 aaKnown RBP7.1□□□□□ -1.27
PTPN12-209ENST00000460731 MYD88Q99836 296 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 DBNDD2Q9BQY9 259 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 UTP14AQ9BVJ6 771 aaKnown RBP7.1□□□□□ -1.27
PTPN12-209ENST00000460731 CEP41Q9BYV8 373 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 NYXQ9GZU5 481 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 CWC25Q9NXE8 425 aaPredicted RBP7.1□□□□□ -1.27
PTPN12-209ENST00000460731 TFIP11Q9UBB9 837 aaKnown RBP7.1□□□□□ -1.27
PTPN12-209ENST00000460731 LRFN2Q9ULH4 789 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 TNNQ9UQP3 1299 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 PPME1Q9Y570 386 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 ANKRD36CQ5JPF3 1778 aa7.1□□□□□ -1.27
PTPN12-209ENST00000460731 PLIN1O60240 522 aa7.09□□□□□ -1.27
PTPN12-209ENST00000460731 GHRHP01286 108 aa7.09□□□□□ -1.27
PTPN12-209ENST00000460731 CSF1RP07333 972 aa7.09□□□□□ -1.27
PTPN12-209ENST00000460731 AAMPQ13685 434 aa7.09□□□□□ -1.27
PTPN12-209ENST00000460731 MVPQ14764 893 aaKnown RBP7.09□□□□□ -1.27
PTPN12-209ENST00000460731 SF3B3Q15393 1217 aaKnown RBP7.09□□□□□ -1.27
PTPN12-209ENST00000460731 RABL6Q3YEC7 729 aaPredicted RBP7.09□□□□□ -1.27
PTPN12-209ENST00000460731 C20orf194Q5TEA3 1177 aa7.09□□□□□ -1.27
PTPN12-209ENST00000460731 PRR5LQ6MZQ0 368 aa7.09□□□□□ -1.27
PTPN12-209ENST00000460731 TMEM57Q8N5G2 664 aa7.09□□□□□ -1.27
PTPN12-209ENST00000460731 FRAT1Q92837 279 aaPredicted RBP7.09□□□□□ -1.27
PTPN12-209ENST00000460731 BRIP1Q9BX63 1249 aa7.09□□□□□ -1.27
PTPN12-209ENST00000460731 SPON1Q9HCB6 807 aa7.09□□□□□ -1.27
PTPN12-209ENST00000460731 ZBTB40Q9NUA8 1239 aa7.09□□□□□ -1.27
PTPN12-209ENST00000460731 KCNK4Q9NYG8 393 aa7.09□□□□□ -1.27
PTPN12-209ENST00000460731 SUPT16HQ9Y5B9 1047 aaKnown RBP7.09□□□□□ -1.27
PTPN12-209ENST00000460731 SH3TC1Q8TE82 1336 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 RAD21O60216 631 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 ZBTB7AO95365 584 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 WNT11O96014 354 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 CENPBP07199 599 aaPredicted RBP7.08□□□□□ -1.28
PTPN12-209ENST00000460731 NBPF7P0C2Y1 421 aaPredicted RBP7.08□□□□□ -1.28
PTPN12-209ENST00000460731 HSP90B1P14625 803 aaKnown RBP7.08□□□□□ -1.28
PTPN12-209ENST00000460731 GPTP24298 496 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 HOXA10P31260 410 aaPredicted RBP7.08□□□□□ -1.28
PTPN12-209ENST00000460731 CD68P34810 354 aaPredicted RBP7.08□□□□□ -1.28
PTPN12-209ENST00000460731 FOXO4P98177 505 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 MTX1Q13505 466 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 KIAA1211Q6ZU35 1233 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 NBPF5PQ86XG9 351 aaPredicted RBP7.08□□□□□ -1.28
PTPN12-209ENST00000460731 SYNE4Q8N205 404 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 PANK1Q8TE04 598 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 MYRFLQ96LU7 910 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 ARXQ96QS3 562 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 TRMT112Q9UI30 125 aaKnown RBP7.08□□□□□ -1.28
PTPN12-209ENST00000460731 CD2APQ9Y5K6 639 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 AFDNP55196 1824 aaKnown RBP7.08□□□□□ -1.28
PTPN12-209ENST00000460731 KIF13BQ9NQT8 1826 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 RTL9Q8NET4 1388 aa7.08□□□□□ -1.28
PTPN12-209ENST00000460731 HMX2A2RU54 273 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 GNAI3P08754 354 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 KCNA3P22001 575 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 TGFB2P61812 414 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 SLC4A10Q6U841 1118 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 ANKMY2Q8IV38 441 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 RGL4Q8IZJ4 473 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 TTLL11Q8NHH1 800 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 UTP4Q969X6 686 aaKnown RBP7.07□□□□□ -1.28
PTPN12-209ENST00000460731 CLUAP1Q96AJ1 413 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 FAM89AQ96GI7 184 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 RBSNQ9H1K0 784 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 CHMP4BQ9H444 224 aaKnown RBP7.07□□□□□ -1.28
PTPN12-209ENST00000460731 DDX19BQ9UMR2 479 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 HDAC5Q9UQL6 1122 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 C10orf71Q711Q0 1435 aa7.07□□□□□ -1.28
PTPN12-209ENST00000460731 FAM196BA6NMK8 535 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 LINC01387J3KSC0 135 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 IRS4O14654 1257 aaPredicted RBP7.06□□□□□ -1.28
PTPN12-209ENST00000460731 PDE8AO60658 829 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 SRGNP10124 158 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 POLD1P28340 1107 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 JAG1P78504 1218 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 EPHA10Q5JZY3 1008 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 ACAD11Q709F0 780 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 UBE3BQ7Z3V4 1068 aa7.06□□□□□ -1.28
PTPN12-209ENST00000460731 TREML1Q86YW5 311 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms