RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 C4AP0C0L4 1744 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 GOLGA6BA6NDN3 693 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 H7C1W4 665 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 SRGAP2O75044 1071 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 MMP1P03956 469 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 MAP2K2P36507 400 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 PPFIA1Q13136 1202 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 CCNI2Q6ZMN8 369 aaPredicted RBP17.43■□□□□ 0.38
SSR4-206ENST00000460616 AMIGO3Q86WK7 504 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 ANKRD20A12PQ8NF67 263 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 RPGRIP1Q96KN7 1286 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 CAPS2Q9BXY5 557 aa17.43■□□□□ 0.38
SSR4-206ENST00000460616 SHTN1A0MZ66 631 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 INPP5BP32019 993 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 KRT9P35527 623 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 PSEN1P49768 467 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.42■□□□□ 0.38
SSR4-206ENST00000460616 SMYD4Q8IYR2 804 aaPredicted RBP17.42■□□□□ 0.38
SSR4-206ENST00000460616 WASF1Q92558 559 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 SECISBP2LQ93073 1101 aaKnown RBP17.42■□□□□ 0.38
SSR4-206ENST00000460616 CCDC87Q9NVE4 849 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 KCNJ14Q9UNX9 436 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 PPP1R3GB7ZBB8 358 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 NDUFA10O95299 355 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 ATP1A1P05023 1023 aaKnown RBP17.42■□□□□ 0.38
SSR4-206ENST00000460616 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 TBC1D10CQ8IV04 446 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 TMEM87BQ96K49 555 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 CAPZA3Q96KX2 299 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 CHP1Q99653 195 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 VPS16Q9H269 839 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 CEP126Q9P2H0 1117 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 CEP131Q9UPN4 1083 aa17.42■□□□□ 0.38
SSR4-206ENST00000460616 LRRC10BA6NIK2 292 aa17.41■□□□□ 0.38
SSR4-206ENST00000460616 B4E1Z4 1266 aa17.41■□□□□ 0.38
SSR4-206ENST00000460616 CASP1P29466 404 aa17.41■□□□□ 0.38
SSR4-206ENST00000460616 KRT31Q15323 416 aa17.41■□□□□ 0.38
SSR4-206ENST00000460616 GSPT2Q8IYD1 628 aaKnown RBP17.41■□□□□ 0.38
SSR4-206ENST00000460616 IGDCC4Q8TDY8 1250 aa17.41■□□□□ 0.38
SSR4-206ENST00000460616 HAUS4Q9H6D7 363 aa17.41■□□□□ 0.38
SSR4-206ENST00000460616 REXO2Q9Y3B8 237 aaKnown RBP17.41■□□□□ 0.38
SSR4-206ENST00000460616 FMNL1O95466 1100 aaPredicted RBP17.41■□□□□ 0.38
SSR4-206ENST00000460616 MYBL2P10244 700 aa17.41■□□□□ 0.38
SSR4-206ENST00000460616 CKAP4Q07065 602 aaKnown RBP17.41■□□□□ 0.38
SSR4-206ENST00000460616 TRIM14Q14142 442 aa17.41■□□□□ 0.38
SSR4-206ENST00000460616 PAPD7Q5XG87 772 aaKnown RBP17.41■□□□□ 0.38
SSR4-206ENST00000460616 PLBD2Q8NHP8 589 aa17.41■□□□□ 0.38
SSR4-206ENST00000460616 PAGE5Q96GU1 130 aa17.41■□□□□ 0.38
SSR4-206ENST00000460616 PUS3Q9BZE2 481 aaKnown RBP17.41■□□□□ 0.38
SSR4-206ENST00000460616 EHD4Q9H223 541 aa17.41■□□□□ 0.38
SSR4-206ENST00000460616 FOXP1Q9H334 677 aaPredicted RBP17.41■□□□□ 0.38
SSR4-206ENST00000460616 RABEP2Q9H5N1 569 aa17.41■□□□□ 0.38
SSR4-206ENST00000460616 LIMA1Q9UHB6 759 aaKnown RBP17.41■□□□□ 0.38
SSR4-206ENST00000460616 AFDNP55196 1824 aaKnown RBP17.4■□□□□ 0.38
SSR4-206ENST00000460616 EIF3HO15372 352 aaKnown RBP eCLIP17.4■□□□□ 0.38
SSR4-206ENST00000460616 COBLO75128 1261 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 APPP05067 770 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 GUCY1A2P33402 732 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 ZAP70P43403 619 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 TXNRD1Q16881 649 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 TMEM67Q5HYA8 995 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 KCNV1Q6PIU1 500 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 GSDMAQ96QA5 445 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 ZBTB3Q9H5J0 574 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 STK36Q9NRP7 1315 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 CIAO1O76071 339 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 ADORA1P30542 326 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 GNGT1P63211 74 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 GBP6Q6ZN66 633 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 XAGE2Q96GT9 111 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 LY9Q9HBG7 655 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 SLC12A7Q9Y666 1083 aa17.4■□□□□ 0.38
SSR4-206ENST00000460616 UBR3Q6ZT12 1888 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 SCARF1Q14162 830 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 CCDC122Q5T0U0 273 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 SGMS1Q86VZ5 419 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 CTNND2Q9UQB3 1225 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 NUP98P52948 1817 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 A0A087X0B3 334 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 CCDC196A0A1B0GTZ2 297 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 CCDC172P0C7W6 258 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 NR5A1Q13285 461 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 SH3RF1Q7Z6J0 888 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 CAGE1Q8TC20 777 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 JAKMIP2Q96AA8 810 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 EPSTI1Q96J88 318 aa17.39■□□□□ 0.37
SSR4-206ENST00000460616 IFNAR1P17181 557 aa17.38■□□□□ 0.37
SSR4-206ENST00000460616 COPB1P53618 953 aaKnown RBP17.38■□□□□ 0.37
SSR4-206ENST00000460616 EN1Q05925 392 aaPredicted RBP17.38■□□□□ 0.37
SSR4-206ENST00000460616 DPYDQ12882 1025 aa17.38■□□□□ 0.37
SSR4-206ENST00000460616 FAM184BQ9ULE4 1060 aa17.38■□□□□ 0.37
SSR4-206ENST00000460616 TBC1D2BQ9UPU7 963 aa17.38■□□□□ 0.37
SSR4-206ENST00000460616 RGPD3A6NKT7 1758 aaPredicted RBP17.38■□□□□ 0.37
SSR4-206ENST00000460616 RGPD4Q7Z3J3 1758 aa17.38■□□□□ 0.37
SSR4-206ENST00000460616 SETQ01105 290 aaPredicted RBP17.38■□□□□ 0.37
SSR4-206ENST00000460616 CABP5Q9NP86 173 aa17.38■□□□□ 0.37
SSR4-206ENST00000460616 TAB2Q9NYJ8 693 aa17.38■□□□□ 0.37
SSR4-206ENST00000460616 CNTNAP4Q9C0A0 1308 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 SPEF2Q9C093 1822 aa17.37■□□□□ 0.37
SSR4-206ENST00000460616 GOLGA8KD6RF30 607 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms