RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 FKBP1BP68106 108 aa18.01■□□□□ 0.47
CMTM3-203ENST00000460097 TTLL12Q14166 644 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-203ENST00000460097 ERCC6LQ2NKX8 1250 aa18.01■□□□□ 0.47
CMTM3-203ENST00000460097 ARMCX5Q6P1M9 558 aa18.01■□□□□ 0.47
CMTM3-203ENST00000460097 TMCO3Q6UWJ1 677 aa18.01■□□□□ 0.47
CMTM3-203ENST00000460097 DHX32Q7L7V1 743 aaKnown RBP18.01■□□□□ 0.47
CMTM3-203ENST00000460097 USP28Q96RU2 1077 aa18.01■□□□□ 0.47
CMTM3-203ENST00000460097 ORC3Q9UBD5 711 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-203ENST00000460097 DNAI1Q9UI46 699 aa18.01■□□□□ 0.47
CMTM3-203ENST00000460097 ABT1Q9ULW3 272 aaKnown RBP18.01■□□□□ 0.47
CMTM3-203ENST00000460097 FLT1P17948 1338 aa18.01■□□□□ 0.47
CMTM3-203ENST00000460097 YEATS4O95619 227 aa18■□□□□ 0.47
CMTM3-203ENST00000460097 CDK11BP21127 795 aaKnown RBP18■□□□□ 0.47
CMTM3-203ENST00000460097 STK3Q13188 491 aa18■□□□□ 0.47
CMTM3-203ENST00000460097 PRKG1Q13976 671 aa18■□□□□ 0.47
CMTM3-203ENST00000460097 SH3BP5LQ7L8J4 393 aa18■□□□□ 0.47
CMTM3-203ENST00000460097 KCNG4Q8TDN1 519 aa18■□□□□ 0.47
CMTM3-203ENST00000460097 ZNF274Q96GC6 653 aaPredicted RBP18■□□□□ 0.47
CMTM3-203ENST00000460097 STRBPQ96SI9 672 aaKnown RBP18■□□□□ 0.47
CMTM3-203ENST00000460097 TMX1Q9H3N1 280 aa18■□□□□ 0.47
CMTM3-203ENST00000460097 GOLGA6L9A6NEM1 432 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 DDTLA6NHG4 134 aaPredicted RBP17.99■□□□□ 0.47
CMTM3-203ENST00000460097 ARMC9Q7Z3E5 817 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 UBXN4Q92575 508 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 TCEANC2Q96MN5 208 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 CSRNP1Q96S65 589 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 SEC62Q99442 399 aaKnown RBP17.99■□□□□ 0.47
CMTM3-203ENST00000460097 DHX36Q9H2U1 1008 aaKnown RBP17.99■□□□□ 0.47
CMTM3-203ENST00000460097 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.99■□□□□ 0.47
CMTM3-203ENST00000460097 M0R2C6 588 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 GPAA1O43292 621 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 TADA3O75528 432 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 EVCP57679 992 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 NLRP12P59046 1061 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 HTRA3P83110 453 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 MCMDC2Q4G0Z9 681 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 ARHGAP29Q52LW3 1261 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 SYT10Q6XYQ8 523 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 SAPCD2Q86UD0 394 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 SDR42E1Q8WUS8 393 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 HELLSQ9NRZ9 838 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 ATP8A2Q9NTI2 1148 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 TLL2Q9Y6L7 1015 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 SLC4A4Q9Y6R1 1079 aa17.99■□□□□ 0.47
CMTM3-203ENST00000460097 PTPDC1A2A3K4 754 aa17.98■□□□□ 0.47
CMTM3-203ENST00000460097 CBFA2T2O43439 604 aa17.98■□□□□ 0.47
CMTM3-203ENST00000460097 PRKAB2O43741 272 aa17.98■□□□□ 0.47
CMTM3-203ENST00000460097 DTNBO60941 627 aa17.98■□□□□ 0.47
CMTM3-203ENST00000460097 EXOSC10Q01780 885 aaKnown RBP17.98■□□□□ 0.47
CMTM3-203ENST00000460097 DCAF15Q66K64 600 aa17.98■□□□□ 0.47
CMTM3-203ENST00000460097 MOB2Q70IA6 237 aa17.98■□□□□ 0.47
CMTM3-203ENST00000460097 MIGA2Q7L4E1 593 aa17.98■□□□□ 0.47
CMTM3-203ENST00000460097 XPO4Q9C0E2 1151 aaKnown RBP17.98■□□□□ 0.47
CMTM3-203ENST00000460097 POLR3EQ9NVU0 708 aa17.98■□□□□ 0.47
CMTM3-203ENST00000460097 PSD3Q9NYI0 1048 aa17.98■□□□□ 0.47
CMTM3-203ENST00000460097 ANGEL1Q9UNK9 670 aaKnown RBP17.98■□□□□ 0.47
CMTM3-203ENST00000460097 ATRNL1Q5VV63 1379 aa17.98■□□□□ 0.47
CMTM3-203ENST00000460097 USP2O75604 605 aaPredicted RBP17.97■□□□□ 0.47
CMTM3-203ENST00000460097 CTDNEP1O95476 244 aa17.97■□□□□ 0.47
CMTM3-203ENST00000460097 GNAT2P19087 354 aa17.97■□□□□ 0.47
CMTM3-203ENST00000460097 HUNKP57058 714 aa17.97■□□□□ 0.47
CMTM3-203ENST00000460097 GPS2Q13227 327 aa17.97■□□□□ 0.47
CMTM3-203ENST00000460097 ZRSR1Q15695 479 aaKnown RBP17.97■□□□□ 0.47
CMTM3-203ENST00000460097 MSL3Q8N5Y2 521 aaKnown RBP17.97■□□□□ 0.47
CMTM3-203ENST00000460097 DSCC1Q9BVC3 393 aa17.97■□□□□ 0.47
CMTM3-203ENST00000460097 DCP1AQ9NPI6 582 aaPredicted RBP17.97■□□□□ 0.47
CMTM3-203ENST00000460097 PI4KBQ9UBF8 816 aa17.97■□□□□ 0.47
CMTM3-203ENST00000460097 MKRN1Q9UHC7 482 aaKnown RBP17.97■□□□□ 0.47
CMTM3-203ENST00000460097 SAP30BPQ9UHR5 308 aaKnown RBP17.97■□□□□ 0.47
CMTM3-203ENST00000460097 FZD1Q9UP38 647 aa17.97■□□□□ 0.47
CMTM3-203ENST00000460097 NEDD4P46934 1319 aa17.97■□□□□ 0.47
CMTM3-203ENST00000460097 SSC5DA1L4H1 1573 aa17.97■□□□□ 0.47
CMTM3-203ENST00000460097 UBE2Q2LH0YL09 131 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 CYP21A2P08686 494 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 ME1P48163 572 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 IREB2P48200 963 aaKnown RBP17.96■□□□□ 0.47
CMTM3-203ENST00000460097 NCAPHQ15003 741 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 MCM9Q9NXL9 1143 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 PCDHA7Q9UN72 937 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 ZSCAN12O43309 604 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 JAKMIP3Q5VZ66 844 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 TRIM65Q6PJ69 517 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 TMC6Q7Z403 805 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 LINC00301Q8NCQ3 95 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 DDX11Q96FC9 970 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 SDF4Q9BRK5 362 aa17.96■□□□□ 0.47
CMTM3-203ENST00000460097 COL2A1P02458 1487 aaPredicted RBP17.96■□□□□ 0.47
CMTM3-203ENST00000460097 PATL2C9JE40 543 aaKnown RBP17.95■□□□□ 0.46
CMTM3-203ENST00000460097 POLR3DP05423 398 aaPredicted RBP17.95■□□□□ 0.46
CMTM3-203ENST00000460097 HLA-DOAP06340 250 aa17.95■□□□□ 0.46
CMTM3-203ENST00000460097 HNRNPH2P55795 449 aaKnown RBP17.95■□□□□ 0.46
CMTM3-203ENST00000460097 DEFB115Q30KQ5 88 aa17.95■□□□□ 0.46
CMTM3-203ENST00000460097 BRAPQ7Z569 592 aa17.95■□□□□ 0.46
CMTM3-203ENST00000460097 FOXP4Q8IVH2 680 aaPredicted RBP17.95■□□□□ 0.46
CMTM3-203ENST00000460097 GPR161Q8N6U8 529 aaKnown RBP17.95■□□□□ 0.46
CMTM3-203ENST00000460097 ZNF341Q9BYN7 854 aa17.95■□□□□ 0.46
CMTM3-203ENST00000460097 IFNKQ9P0W0 207 aa17.95■□□□□ 0.46
CMTM3-203ENST00000460097 TBC1D12O60347 775 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 APPP05067 770 aa17.94■□□□□ 0.46
CMTM3-203ENST00000460097 MAP3K10Q02779 954 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms