RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 KCNH3Q9ULD8 1083 aa7.96□□□□□ -1.14
CCDC50-203ENST00000460064 SHOXO15266 292 aa7.95□□□□□ -1.14
CCDC50-203ENST00000460064 ITGAVP06756 1048 aa7.95□□□□□ -1.14
CCDC50-203ENST00000460064 HSP90AA2PQ14568 343 aaPredicted RBP7.95□□□□□ -1.14
CCDC50-203ENST00000460064 LONRF2Q1L5Z9 754 aa7.95□□□□□ -1.14
CCDC50-203ENST00000460064 PLEKHG4Q58EX7 1191 aa7.95□□□□□ -1.14
CCDC50-203ENST00000460064 ZAR1Q86SH2 424 aa7.95□□□□□ -1.14
CCDC50-203ENST00000460064 ZSWIM2Q8NEG5 633 aa7.95□□□□□ -1.14
CCDC50-203ENST00000460064 GATA6Q92908 595 aa7.95□□□□□ -1.14
CCDC50-203ENST00000460064 MFSD14AQ96MC6 490 aa7.95□□□□□ -1.14
CCDC50-203ENST00000460064 LGR4Q9BXB1 951 aa7.95□□□□□ -1.14
CCDC50-203ENST00000460064 PRDM14Q9GZV8 571 aa7.95□□□□□ -1.14
CCDC50-203ENST00000460064 STK17AQ9UEE5 414 aa7.95□□□□□ -1.14
CCDC50-203ENST00000460064 AKT3Q9Y243 479 aa7.95□□□□□ -1.14
CCDC50-203ENST00000460064 A0A087WZG4 1122 aa7.94□□□□□ -1.14
CCDC50-203ENST00000460064 ADCY3O60266 1144 aa7.94□□□□□ -1.14
CCDC50-203ENST00000460064 ZNF445P59923 1031 aa7.94□□□□□ -1.14
CCDC50-203ENST00000460064 SNW1Q13573 536 aaKnown RBP7.94□□□□□ -1.14
CCDC50-203ENST00000460064 DUSP27Q5VZP5 1158 aa7.94□□□□□ -1.14
CCDC50-203ENST00000460064 PRR23CQ6ZRP0 262 aa7.94□□□□□ -1.14
CCDC50-203ENST00000460064 C16orf86Q6ZW13 317 aa7.94□□□□□ -1.14
CCDC50-203ENST00000460064 FAM214BQ7L5A3 538 aa7.94□□□□□ -1.14
CCDC50-203ENST00000460064 SHISA5Q8N114 240 aa7.94□□□□□ -1.14
CCDC50-203ENST00000460064 ZNF513Q8N8E2 541 aaPredicted RBP7.94□□□□□ -1.14
CCDC50-203ENST00000460064 HEXIM2Q96MH2 286 aaKnown RBP7.94□□□□□ -1.14
CCDC50-203ENST00000460064 IPO9Q96P70 1041 aaKnown RBP7.94□□□□□ -1.14
CCDC50-203ENST00000460064 PUS7Q96PZ0 661 aaKnown RBP7.94□□□□□ -1.14
CCDC50-203ENST00000460064 SLC26A8Q96RN1 970 aa7.94□□□□□ -1.14
CCDC50-203ENST00000460064 CDC6Q99741 560 aa7.94□□□□□ -1.14
CCDC50-203ENST00000460064 ASCC2Q9H1I8 757 aaPredicted RBP7.94□□□□□ -1.14
CCDC50-203ENST00000460064 SLKQ9H2G2 1235 aaPredicted RBP7.94□□□□□ -1.14
CCDC50-203ENST00000460064 TRAV20A0A0B4J274 112 aa7.93□□□□□ -1.14
CCDC50-203ENST00000460064 FAM170BA6NMN3 283 aa7.93□□□□□ -1.14
CCDC50-203ENST00000460064 L1CAMP32004 1257 aa7.93□□□□□ -1.14
CCDC50-203ENST00000460064 KIR3DL1P43629 444 aa7.93□□□□□ -1.14
CCDC50-203ENST00000460064 PPP2R2AP63151 447 aa7.93□□□□□ -1.14
CCDC50-203ENST00000460064 CYP27A1Q02318 531 aa7.93□□□□□ -1.14
CCDC50-203ENST00000460064 RASSF7Q02833 373 aa7.93□□□□□ -1.14
CCDC50-203ENST00000460064 PPP2R5DQ14738 602 aa7.93□□□□□ -1.14
CCDC50-203ENST00000460064 ZC3H12BQ5HYM0 836 aaKnown RBP7.93□□□□□ -1.14
CCDC50-203ENST00000460064 RCC1LQ96I51 464 aaKnown RBP7.93□□□□□ -1.14
CCDC50-203ENST00000460064 Q96M66 194 aa7.93□□□□□ -1.14
CCDC50-203ENST00000460064 NOL6Q9H6R4 1146 aaKnown RBP7.93□□□□□ -1.14
CCDC50-203ENST00000460064 GFOD1Q9NXC2 390 aa7.93□□□□□ -1.14
CCDC50-203ENST00000460064 DIS3Q9Y2L1 958 aaKnown RBP7.93□□□□□ -1.14
CCDC50-203ENST00000460064 ASMTLO95671 621 aa7.92□□□□□ -1.14
CCDC50-203ENST00000460064 TCEA2Q15560 299 aa7.92□□□□□ -1.14
CCDC50-203ENST00000460064 TMEM67Q5HYA8 995 aa7.92□□□□□ -1.14
CCDC50-203ENST00000460064 RNF43Q68DV7 783 aa7.92□□□□□ -1.14
CCDC50-203ENST00000460064 POMZP3Q6PJE2 187 aa7.92□□□□□ -1.14
CCDC50-203ENST00000460064 ZNF765Q7L2R6 523 aa7.92□□□□□ -1.14
CCDC50-203ENST00000460064 ZNF227Q86WZ6 799 aa7.92□□□□□ -1.14
CCDC50-203ENST00000460064 ARHGEF39Q8N4T4 335 aa7.92□□□□□ -1.14
CCDC50-203ENST00000460064 CRACR2BQ8N4Y2 399 aaPredicted RBP7.92□□□□□ -1.14
CCDC50-203ENST00000460064 DTWD2Q8NBA8 298 aa7.92□□□□□ -1.14
CCDC50-203ENST00000460064 AARSD1Q9BTE6 412 aaKnown RBP7.92□□□□□ -1.14
CCDC50-203ENST00000460064 DSCC1Q9BVC3 393 aa7.92□□□□□ -1.14
CCDC50-203ENST00000460064 CCDC163A0A0D9SF12 145 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 GNAT3A8MTJ3 354 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 PRR33A8MZF0 331 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 IGF2BP3O00425 579 aaKnown RBP eCLIP7.91□□□□□ -1.14
CCDC50-203ENST00000460064 PPP1R12AO14974 1030 aaPredicted RBP7.91□□□□□ -1.14
CCDC50-203ENST00000460064 GYS2P54840 703 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 KCNMA1Q12791 1236 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 FOXB2Q5VYV0 432 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 ARHGAP27Q6ZUM4 889 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 TMC3Q7Z5M5 1100 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 FIBCD1Q8N539 461 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 SYTL5Q8TDW5 730 aaPredicted RBP7.91□□□□□ -1.14
CCDC50-203ENST00000460064 ARHGEF4Q9NR80 690 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 TPSG1Q9NRR2 321 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 EMC9Q9Y3B6 208 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 FHOD1Q9Y613 1164 aa7.91□□□□□ -1.14
CCDC50-203ENST00000460064 MEIS1O00470 390 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 KCNH1O95259 989 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 F13BP05160 661 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 GRIA2P42262 883 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 TNK2Q07912 1038 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 NFIAQ12857 509 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 CLEC16AQ2KHT3 1053 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 FAM209AQ5JX71 171 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 RNF187Q5TA31 235 aaPredicted RBP7.9□□□□□ -1.14
CCDC50-203ENST00000460064 YOD1Q5VVQ6 348 aaPredicted RBP7.9□□□□□ -1.14
CCDC50-203ENST00000460064 KIAA0907Q7Z7F0 614 aaPredicted RBP7.9□□□□□ -1.14
CCDC50-203ENST00000460064 SCUBE1Q8IWY4 988 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 SYNPOQ8N3V7 929 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 MRGPRX3Q96LB0 322 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 FEZ1Q99689 392 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 DHRS4Q9BTZ2 278 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 ATG3Q9NT62 314 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 PRR13Q9NZ81 148 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 CGGBP1Q9UFW8 167 aaPredicted RBP7.9□□□□□ -1.14
CCDC50-203ENST00000460064 MINPP1Q9UNW1 487 aa7.9□□□□□ -1.14
CCDC50-203ENST00000460064 SF3B6Q9Y3B4 125 aaKnown RBP7.9□□□□□ -1.14
CCDC50-203ENST00000460064 TRBV23-1A0A0A0MS06 115 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 FAM155AB1AL88 458 aaPredicted RBP7.89□□□□□ -1.15
CCDC50-203ENST00000460064 WDR64B1ANS9 1081 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 PRODHO43272 600 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 TBX1O43435 398 aa7.89□□□□□ -1.15
CCDC50-203ENST00000460064 SIGLEC6O43699 453 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms