RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 PTPREP23469 700 aa18.49■□□□□ 0.55
SDF4-204ENST00000459994 CCND3P30281 292 aaPredicted RBP18.49■□□□□ 0.55
SDF4-204ENST00000459994 DSG3P32926 999 aa18.49■□□□□ 0.55
SDF4-204ENST00000459994 CACNB2Q08289 660 aaPredicted RBP18.49■□□□□ 0.55
SDF4-204ENST00000459994 COG2Q14746 738 aa18.49■□□□□ 0.55
SDF4-204ENST00000459994 IFNL3Q8IZI9 196 aa18.49■□□□□ 0.55
SDF4-204ENST00000459994 MOV10L1Q9BXT6 1211 aaKnown RBP18.49■□□□□ 0.55
SDF4-204ENST00000459994 BACH2Q9BYV9 841 aa18.49■□□□□ 0.55
SDF4-204ENST00000459994 EPB41L2O43491 1005 aaKnown RBP18.48■□□□□ 0.55
SDF4-204ENST00000459994 REC8O95072 547 aa18.48■□□□□ 0.55
SDF4-204ENST00000459994 XRCC5P13010 732 aaKnown RBP18.48■□□□□ 0.55
SDF4-204ENST00000459994 RGS2P41220 211 aa18.48■□□□□ 0.55
SDF4-204ENST00000459994 TDO2P48775 406 aa18.48■□□□□ 0.55
SDF4-204ENST00000459994 MAP2K5Q13163 448 aa18.48■□□□□ 0.55
SDF4-204ENST00000459994 GIMAP6Q6P9H5 292 aa18.48■□□□□ 0.55
SDF4-204ENST00000459994 CCAR1Q8IX12 1150 aaKnown RBP18.48■□□□□ 0.55
SDF4-204ENST00000459994 NUP88Q99567 741 aaPredicted RBP18.48■□□□□ 0.55
SDF4-204ENST00000459994 APBA2Q99767 749 aa18.48■□□□□ 0.55
SDF4-204ENST00000459994 HMX1Q9NP08 348 aaPredicted RBP18.48■□□□□ 0.55
SDF4-204ENST00000459994 TACC3Q9Y6A5 838 aa18.48■□□□□ 0.55
SDF4-204ENST00000459994 CEP290O15078 2479 aa18.48■□□□□ 0.55
SDF4-204ENST00000459994 PATL2C9JE40 543 aaKnown RBP18.47■□□□□ 0.55
SDF4-204ENST00000459994 FLOT1O75955 427 aa18.47■□□□□ 0.55
SDF4-204ENST00000459994 APPP05067 770 aa18.47■□□□□ 0.55
SDF4-204ENST00000459994 ZKSCAN1P17029 563 aaPredicted RBP18.47■□□□□ 0.55
SDF4-204ENST00000459994 GRB14Q14449 540 aa18.47■□□□□ 0.55
SDF4-204ENST00000459994 KIAA1211Q6ZU35 1233 aa18.47■□□□□ 0.55
SDF4-204ENST00000459994 DPF3Q92784 378 aa18.47■□□□□ 0.55
SDF4-204ENST00000459994 PAWRQ96IZ0 340 aaKnown RBP18.47■□□□□ 0.55
SDF4-204ENST00000459994 SPATC1LQ9H0A9 340 aa18.47■□□□□ 0.55
SDF4-204ENST00000459994 KANSL2Q9H9L4 492 aa18.47■□□□□ 0.55
SDF4-204ENST00000459994 PCDH10Q9P2E7 1040 aa18.47■□□□□ 0.55
SDF4-204ENST00000459994 SMCHD1A6NHR9 2005 aa18.47■□□□□ 0.55
SDF4-204ENST00000459994 IGKV6D-41A0A0C4DH26 115 aa18.46■□□□□ 0.55
SDF4-204ENST00000459994 WDR46O15213 610 aaKnown RBP18.46■□□□□ 0.55
SDF4-204ENST00000459994 CCNA1P78396 465 aa18.46■□□□□ 0.55
SDF4-204ENST00000459994 FAM83BQ5T0W9 1011 aa18.46■□□□□ 0.55
SDF4-204ENST00000459994 VPS53Q5VIR6 699 aa18.46■□□□□ 0.55
SDF4-204ENST00000459994 LPAR1Q92633 364 aa18.46■□□□□ 0.55
SDF4-204ENST00000459994 DSCC1Q9BVC3 393 aa18.46■□□□□ 0.55
SDF4-204ENST00000459994 LSG1Q9H089 658 aaKnown RBP18.46■□□□□ 0.55
SDF4-204ENST00000459994 CWC22Q9HCG8 908 aaKnown RBP18.46■□□□□ 0.55
SDF4-204ENST00000459994 INCENPQ9NQS7 918 aa18.46■□□□□ 0.55
SDF4-204ENST00000459994 SLC15A5A6NIM6 579 aa18.45■□□□□ 0.54
SDF4-204ENST00000459994 RAD21O60216 631 aa18.45■□□□□ 0.54
SDF4-204ENST00000459994 HSPD1P10809 573 aaKnown RBP18.45■□□□□ 0.54
SDF4-204ENST00000459994 ERCC3P19447 782 aa18.45■□□□□ 0.54
SDF4-204ENST00000459994 TMEM132BQ14DG7 1078 aa18.45■□□□□ 0.54
SDF4-204ENST00000459994 ALX1Q15699 326 aa18.45■□□□□ 0.54
SDF4-204ENST00000459994 HABP4Q5JVS0 413 aaKnown RBP18.45■□□□□ 0.54
SDF4-204ENST00000459994 MKNK2Q9HBH9 465 aa18.45■□□□□ 0.54
SDF4-204ENST00000459994 ANO2Q9NQ90 1003 aa18.45■□□□□ 0.54
SDF4-204ENST00000459994 HOXC10Q9NYD6 342 aa18.45■□□□□ 0.54
SDF4-204ENST00000459994 COLQQ9Y215 455 aaPredicted RBP18.45■□□□□ 0.54
SDF4-204ENST00000459994 MCM3APO60318 1980 aa18.44■□□□□ 0.54
SDF4-204ENST00000459994 COBLO75128 1261 aa18.44■□□□□ 0.54
SDF4-204ENST00000459994 SEC24BO95487 1268 aa18.44■□□□□ 0.54
SDF4-204ENST00000459994 IGHA2P01877 340 aa18.44■□□□□ 0.54
SDF4-204ENST00000459994 PLS1Q14651 629 aa18.44■□□□□ 0.54
SDF4-204ENST00000459994 FAM47AQ5JRC9 791 aa18.44■□□□□ 0.54
SDF4-204ENST00000459994 LHX8Q68G74 356 aa18.44■□□□□ 0.54
SDF4-204ENST00000459994 TRPV1Q8NER1 839 aa18.44■□□□□ 0.54
SDF4-204ENST00000459994 MAP4K1Q92918 833 aa18.44■□□□□ 0.54
SDF4-204ENST00000459994 SH2D4AQ9H788 454 aa18.44■□□□□ 0.54
SDF4-204ENST00000459994 ADAMTS5Q9UNA0 930 aa18.44■□□□□ 0.54
SDF4-204ENST00000459994 ADORA2AP29274 412 aa18.43■□□□□ 0.54
SDF4-204ENST00000459994 CYP2C19P33261 490 aa18.43■□□□□ 0.54
SDF4-204ENST00000459994 PTH1RQ03431 593 aa18.43■□□□□ 0.54
SDF4-204ENST00000459994 CTDSPL2Q05D32 466 aa18.43■□□□□ 0.54
SDF4-204ENST00000459994 PPARAQ07869 468 aa18.43■□□□□ 0.54
SDF4-204ENST00000459994 REPS2Q8NFH8 660 aa18.43■□□□□ 0.54
SDF4-204ENST00000459994 CEP95Q96GE4 821 aa18.43■□□□□ 0.54
SDF4-204ENST00000459994 NACAP1Q9BZK3 213 aa18.43■□□□□ 0.54
SDF4-204ENST00000459994 NYAP2Q9P242 653 aa18.43■□□□□ 0.54
SDF4-204ENST00000459994 CLIP2Q9UDT6 1046 aa18.43■□□□□ 0.54
SDF4-204ENST00000459994 OGDHLQ9ULD0 1010 aa18.43■□□□□ 0.54
SDF4-204ENST00000459994 LAMA4Q16363 1823 aa18.43■□□□□ 0.54
SDF4-204ENST00000459994 NDUFB10O96000 172 aa18.42■□□□□ 0.54
SDF4-204ENST00000459994 HOXC6P09630 235 aa18.42■□□□□ 0.54
SDF4-204ENST00000459994 NCAPG2Q86XI2 1143 aa18.42■□□□□ 0.54
SDF4-204ENST00000459994 LRRC47Q8N1G4 583 aaKnown RBP18.42■□□□□ 0.54
SDF4-204ENST00000459994 USP26Q9BXU7 913 aa18.42■□□□□ 0.54
SDF4-204ENST00000459994 NAPBQ9H115 298 aa18.42■□□□□ 0.54
SDF4-204ENST00000459994 GOPCQ9HD26 462 aa18.42■□□□□ 0.54
SDF4-204ENST00000459994 PPP1R9AQ9ULJ8 1098 aa18.42■□□□□ 0.54
SDF4-204ENST00000459994 IVNS1ABPQ9Y6Y0 642 aa18.42■□□□□ 0.54
SDF4-204ENST00000459994 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
SDF4-204ENST00000459994 ZMYM6O95789 1325 aa18.42■□□□□ 0.54
SDF4-204ENST00000459994 F5H6K3 240 aa18.41■□□□□ 0.54
SDF4-204ENST00000459994 KLRC3Q07444 240 aa18.41■□□□□ 0.54
SDF4-204ENST00000459994 RASGRP2Q7LDG7 609 aa18.41■□□□□ 0.54
SDF4-204ENST00000459994 TRMT44Q8IYL2 757 aaKnown RBP18.41■□□□□ 0.54
SDF4-204ENST00000459994 MB21D1Q8N884 522 aa18.41■□□□□ 0.54
SDF4-204ENST00000459994 SHCBP1Q8NEM2 672 aa18.41■□□□□ 0.54
SDF4-204ENST00000459994 CHMP4CQ96CF2 233 aa18.41■□□□□ 0.54
SDF4-204ENST00000459994 HTATIP2Q9BUP3 242 aa18.41■□□□□ 0.54
SDF4-204ENST00000459994 CTNNA3Q9UI47 895 aa18.41■□□□□ 0.54
SDF4-204ENST00000459994 PFASO15067 1338 aa18.41■□□□□ 0.54
SDF4-204ENST00000459994 PLIN4Q96Q06 1357 aa18.41■□□□□ 0.54
SDF4-204ENST00000459994 VWA5AO00534 786 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms