RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 RMND1Q9NWS8 449 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 ZHX1Q9UKY1 873 aaPredicted RBP6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 RAB21Q9UL25 225 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 DENND2AQ9ULE3 1009 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 PCDHB6Q9Y5E3 794 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 ADGRG1Q9Y653 693 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 TACC3Q9Y6A5 838 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 SLC4A4Q9Y6R1 1079 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 TAF1P21675 1872 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 COL24A1Q17RW2 1714 aa6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 BAZ2BQ9UIF8 2168 aaKnown RBP6.95□□□□□ -1.3
UBQLN4-202ENST00000459954 FOCADQ5VW36 1801 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 MYH7BA7E2Y1 1941 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 MAGEB6P1A0A0J9YX57 407 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 PPP1R3GB7ZBB8 358 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 H7C1D1 291 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 GTPBP6O43824 516 aaPredicted RBP6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 KIF5CO60282 957 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 MMP10P09238 476 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 RXRAP19793 462 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 GPTP24298 496 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 CALML3P27482 149 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 GUCY1A2P33402 732 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 PDE6BP35913 854 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 TXLNAP40222 546 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 PPP1R2P41236 205 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 ST5P78524 1137 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 GPS2Q13227 327 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 SBK1Q52WX2 424 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 CCDC178Q5BJE1 867 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 CATIPQ7Z7H3 387 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 IQCA1Q86XH1 822 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 SYNE4Q8N205 404 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 TXLNBQ8N3L3 684 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 LCORLQ8N3X6 602 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 IQUBQ8NA54 791 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 MSANTD4Q8NCY6 345 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 NOC3LQ8WTT2 800 aaKnown RBP6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 IQCDQ96DY2 449 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 PAGE5Q96GU1 130 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 MED15Q96RN5 788 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 ZSCAN10Q96SZ4 725 aaPredicted RBP6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 GBP3Q9H0R5 595 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 CABP5Q9NP86 173 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 SAMSN1Q9NSI8 373 aaKnown RBP6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 RWDD2AQ9UIY3 292 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 CDC23Q9UJX2 597 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 KCNJ14Q9UNX9 436 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 TNKSO95271 1327 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 SYNRGQ9UMZ2 1314 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 NAV1Q8NEY1 1877 aa6.94□□□□□ -1.3
UBQLN4-202ENST00000459954 A0A1W2PQC6 194 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 MAP2K7O14733 419 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 NPHP1O15259 732 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 FANCGO15287 622 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 FOXN1O15353 648 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 GRIN3BO60391 1043 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 MFAP3LO75121 409 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 ERLIN1O75477 346 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 TBC1D8O95759 1140 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 PRR29P0C7W0 189 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 CYP7A1P22680 504 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 LONP1P36776 959 aaKnown RBP6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 ADKP55263 362 aaKnown RBP6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 TROAPQ12815 778 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 NR5A1Q13285 461 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 KCNB1Q14721 858 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 SF3B3Q15393 1217 aaKnown RBP6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 E2F4Q16254 413 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 WHAMMP3Q1A5X7 153 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 MUM1L1Q5H9M0 696 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 ZNF658Q5TYW1 1059 aaPredicted RBP6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 SUSD4Q5VX71 490 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 GALNT17Q6IS24 598 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 CYP26C1Q6V0L0 522 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 TMTC3Q6ZXV5 915 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 PDILTQ8N807 584 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 ENAHQ8N8S7 591 aaPredicted RBP6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 IGSF22Q8N9C0 903 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 ANKS1AQ92625 1134 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 RPGRIP1Q96KN7 1286 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 CCDC85AQ96PX6 553 aaPredicted RBP6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 WDR24Q96S15 920 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 RIOK1Q9BRS2 568 aaKnown RBP6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 MYL10Q9BUA6 226 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 FUT8Q9BYC5 575 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 TSPYL1Q9H0U9 437 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 MAGEF1Q9HAY2 307 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 ATP8A2Q9NTI2 1148 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 LRP2BPQ9P2M1 347 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 ATF5Q9Y2D1 282 aaPredicted RBP6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 UBR3Q6ZT12 1888 aa6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 TNRC6CQ9HCJ0 1690 aaKnown RBP6.93□□□□□ -1.3
UBQLN4-202ENST00000459954 KIF13BQ9NQT8 1826 aa6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 KLRG2A4D1S0 409 aaPredicted RBP6.92□□□□□ -1.3
UBQLN4-202ENST00000459954 CTAGE9A4FU28 777 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms