RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 LINC00116Q8NCU8 138 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 RABGGTAQ92696 567 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 INTS13Q9NVM9 706 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 RTCBQ9Y3I0 505 aaKnown RBP10□□□□□ -0.81
HDAC3-202ENST00000459727 XDHP47989 1333 aa10□□□□□ -0.81
HDAC3-202ENST00000459727 MYH13Q9UKX3 1938 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 BICDL2A1A5D9 508 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 VWA3AA6NCI4 1184 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 TMEM232C9JQI7 657 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 SNAP23O00161 211 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 PSMA7O14818 248 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 TADA3O75528 432 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 ZSCAN20P17040 1043 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-202ENST00000459727 ATP2B1P20020 1258 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 GNA11P29992 359 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 PBX1P40424 430 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 STAT6P42226 847 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 AMPD3Q01432 767 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 GRIN1Q05586 938 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 TSR1Q2NL82 804 aaKnown RBP9.99□□□□□ -0.81
HDAC3-202ENST00000459727 KMT5BQ4FZB7 885 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 ARHGAP29Q52LW3 1261 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 SPECC1Q5M775 1068 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 C12orf60Q5U649 245 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 PDXDC2PQ6P474 469 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 FBXO38Q6PIJ6 1188 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 DTHD1Q6ZMT9 781 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 KRT25Q7Z3Z0 450 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 ZNF444Q8N0Y2 327 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-202ENST00000459727 SRBD1Q8N5C6 995 aaKnown RBP9.99□□□□□ -0.81
HDAC3-202ENST00000459727 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 PNMA1Q8ND90 353 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 EHBP1Q8NDI1 1231 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 GOLGA1Q92805 767 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 CELF1Q92879 486 aaKnown RBP9.99□□□□□ -0.81
HDAC3-202ENST00000459727 SPZ1Q9BXG8 430 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 CCSER1Q9C0I3 900 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 MKNK2Q9HBH9 465 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 MCM9Q9NXL9 1143 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 FAM53CQ9NYF3 392 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 MAGEC2Q9UBF1 373 aaPredicted RBP9.99□□□□□ -0.81
HDAC3-202ENST00000459727 TAOK2Q9UL54 1235 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 PARP3Q9Y6F1 533 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 NHSQ6T4R5 1651 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 C10orf71Q711Q0 1435 aa9.99□□□□□ -0.81
HDAC3-202ENST00000459727 CCDC88AQ3V6T2 1871 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 MYH6P13533 1939 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 A0A1W2PQC6 194 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 PPP1R3GB7ZBB8 358 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 NPHP1O15259 732 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 FOXN1O15353 648 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 RPN1P04843 607 aaKnown RBP9.98□□□□□ -0.81
HDAC3-202ENST00000459727 TSPY3P0CV98 308 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 TSPY8P0CW00 308 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 AFMP43652 599 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 PPP2R3AQ06190 1150 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 GRAPQ13588 217 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 ZNF174Q15697 407 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 NPY5RQ15761 445 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 TEX35Q5T0J7 233 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 RRAGBQ5VZM2 374 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 TBC1D9BQ66K14 1250 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 CYP26C1Q6V0L0 522 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 PIK3AP1Q6ZUJ8 805 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 RASGRP2Q7LDG7 609 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 TMC4Q7Z404 712 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 TRMT44Q8IYL2 757 aaKnown RBP9.98□□□□□ -0.81
HDAC3-202ENST00000459727 GRAPLQ8TC17 118 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-202ENST00000459727 TBC1D22AQ8WUA7 517 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 DHTKD1Q96HY7 919 aaPredicted RBP9.98□□□□□ -0.81
HDAC3-202ENST00000459727 EPSTI1Q96J88 318 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 NUP58Q9BVL2 599 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 LRRC27Q9C0I9 530 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 GBP3Q9H0R5 595 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 THAP9Q9H5L6 903 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 DISC1Q9NRI5 854 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 ZNHIT6Q9NWK9 470 aaKnown RBP9.98□□□□□ -0.81
HDAC3-202ENST00000459727 MRFAP1Q9Y605 127 aa9.98□□□□□ -0.81
HDAC3-202ENST00000459727 MYH14Q7Z406 1995 aaKnown RBP9.97□□□□□ -0.81
HDAC3-202ENST00000459727 TNRC6CQ9HCJ0 1690 aaKnown RBP9.97□□□□□ -0.81
HDAC3-202ENST00000459727 ESYT2A0FGR8 921 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 UBE2Q2LH0YL09 131 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 N4BP3O15049 544 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 SLC26A4O43511 780 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 ERLIN1O75477 346 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 FGFR1OPO95684 399 aaKnown RBP9.97□□□□□ -0.81
HDAC3-202ENST00000459727 MCM3P25205 808 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 MCM7P33993 719 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 UBA7P41226 1012 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 TFAP4Q01664 338 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 GPS2Q13227 327 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 BRD3Q15059 726 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 COBLL1Q53SF7 1204 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 KLHL10Q6JEL2 608 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 ZNF662Q6ZS27 426 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 CMTR1Q8N1G2 835 aaKnown RBP9.97□□□□□ -0.81
HDAC3-202ENST00000459727 TXLNBQ8N3L3 684 aa9.97□□□□□ -0.81
HDAC3-202ENST00000459727 MSL3Q8N5Y2 521 aaKnown RBP9.97□□□□□ -0.81
HDAC3-202ENST00000459727 RASSF8Q8NHQ8 419 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms