RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 CCDC102BQ68D86 513 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 CDC37L1Q7L3B6 337 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 CTAGE6Q86UF2 777 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 TRIM74Q86UV6 250 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 TRIM73Q86UV7 250 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 CTAGE4Q8IX94 777 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 COG1Q8WTW3 980 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 KIF9Q9HAQ2 790 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 GOLGA6AQ9NYA3 693 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 RBM8AQ9Y5S9 174 aaKnown RBP12.74□□□□□ -0.37
DDX39B-214ENST00000458640 TNRC6CQ9HCJ0 1690 aaKnown RBP12.74□□□□□ -0.37
DDX39B-214ENST00000458640 ERICH2A1L162 156 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 RNF113AO15541 343 aaKnown RBP12.74□□□□□ -0.37
DDX39B-214ENST00000458640 PHACTR2O75167 634 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 APBA3O96018 575 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 CCDC38Q502W7 563 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 CC2D2BQ6DHV5 1058 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 VSTM4Q8IW00 320 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 CCDC170Q8IYT3 715 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 C3orf20Q8ND61 904 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 ENGASEQ8NFI3 743 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 RUBCNQ92622 972 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 P3H4Q92791 437 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 CCDC47Q96A33 483 aaKnown RBP12.74□□□□□ -0.37
DDX39B-214ENST00000458640 RPGRIP1Q96KN7 1286 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.74□□□□□ -0.375e-7■■■■■ 34
DDX39B-214ENST00000458640 MYO1AQ9UBC5 1043 aa12.74□□□□□ -0.37
DDX39B-214ENST00000458640 PPFIA3O75145 1194 aa12.73□□□□□ -0.37
DDX39B-214ENST00000458640 GYS1P13807 737 aa12.73□□□□□ -0.37
DDX39B-214ENST00000458640 RBM5P52756 815 aaKnown RBP eCLIP12.73□□□□□ -0.372e-7■□□□□ 11
DDX39B-214ENST00000458640 VSNL1P62760 191 aa12.73□□□□□ -0.37
DDX39B-214ENST00000458640 FANCCQ00597 558 aa12.73□□□□□ -0.37
DDX39B-214ENST00000458640 PTH1RQ03431 593 aa12.73□□□□□ -0.37
DDX39B-214ENST00000458640 NECTIN1Q15223 517 aa12.73□□□□□ -0.37
DDX39B-214ENST00000458640 ZMYM1Q5SVZ6 1142 aa12.73□□□□□ -0.37
DDX39B-214ENST00000458640 PRPF40BQ6NWY9 871 aaKnown RBP12.73□□□□□ -0.37
DDX39B-214ENST00000458640 TMEM139Q8IV31 216 aa12.73□□□□□ -0.37
DDX39B-214ENST00000458640 FLAD1Q8NFF5 587 aa12.73□□□□□ -0.37
DDX39B-214ENST00000458640 CCDC148Q8NFR7 591 aa12.73□□□□□ -0.37
DDX39B-214ENST00000458640 HELBQ8NG08 1087 aaPredicted RBP12.73□□□□□ -0.37
DDX39B-214ENST00000458640 SPDL1Q96EA4 605 aa12.73□□□□□ -0.37
DDX39B-214ENST00000458640 CORO1CQ9ULV4 474 aaPredicted RBP12.73□□□□□ -0.37
DDX39B-214ENST00000458640 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
DDX39B-214ENST00000458640 OPA1O60313 960 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 EPB41P11171 864 aaKnown RBP12.72□□□□□ -0.37
DDX39B-214ENST00000458640 PSMA5P28066 241 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 MCAMP43121 646 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 ZAP70P43403 619 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 CD151P48509 253 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 PSMD2Q13200 908 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 CCDC96Q2M329 555 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 C3orf67Q6ZVT6 689 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 ZNF589Q86UQ0 364 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-214ENST00000458640 CCHCR1Q8TD31 782 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 LMBR1Q8WVP7 490 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 JAKMIP1Q96N16 626 aaKnown RBP12.72□□□□□ -0.37
DDX39B-214ENST00000458640 MMTAG2Q9BU76 263 aaKnown RBP12.72□□□□□ -0.37
DDX39B-214ENST00000458640 GRIN2DO15399 1336 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 DOCK2Q92608 1830 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 KIF5CO60282 957 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 TAF5LO75529 589 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 AP1G2O75843 785 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 TOP1P11387 765 aaKnown RBP12.72□□□□□ -0.37
DDX39B-214ENST00000458640 RPS8P62241 208 aaKnown RBP12.72□□□□□ -0.37
DDX39B-214ENST00000458640 UBE4AQ14139 1066 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 KRT32Q14532 448 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 EMC10Q5UCC4 262 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 CREB3L3Q68CJ9 461 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 CRELD2Q6UXH1 353 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-214ENST00000458640 NAA15Q9BXJ9 866 aaKnown RBP12.72□□□□□ -0.37
DDX39B-214ENST00000458640 ANKRD2Q9GZV1 360 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 SLC40A1Q9NP59 571 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 TFCP2L1Q9NZI6 479 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 EP400Q96L91 3159 aa12.72□□□□□ -0.37
DDX39B-214ENST00000458640 NDUFAB1O14561 156 aa12.71□□□□□ -0.37
DDX39B-214ENST00000458640 CCDC175P0C221 793 aa12.71□□□□□ -0.37
DDX39B-214ENST00000458640 PHKA1P46020 1223 aa12.71□□□□□ -0.37
DDX39B-214ENST00000458640 NLRP12P59046 1061 aa12.71□□□□□ -0.37
DDX39B-214ENST00000458640 SCARF1Q14162 830 aa12.71□□□□□ -0.37
DDX39B-214ENST00000458640 CAPRIN2Q6IMN6 1127 aaKnown RBP12.71□□□□□ -0.37
DDX39B-214ENST00000458640 SMARCC2Q8TAQ2 1214 aa12.71□□□□□ -0.37
DDX39B-214ENST00000458640 ZFAND2BQ8WV99 257 aa12.71□□□□□ -0.37
DDX39B-214ENST00000458640 THOC1Q96FV9 657 aaKnown RBP12.71□□□□□ -0.37
DDX39B-214ENST00000458640 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.37
DDX39B-214ENST00000458640 ZC3H4Q9UPT8 1303 aaKnown RBP12.71□□□□□ -0.37
DDX39B-214ENST00000458640 TAF1P21675 1872 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 EME2A4GXA9 379 aaPredicted RBP12.71□□□□□ -0.38
DDX39B-214ENST00000458640 PDLIM1O00151 329 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 PFKFB2O60825 505 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 LARGE1O95461 756 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 FERP16591 822 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 RESTQ13127 1097 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 ME3Q16798 604 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 CEP57Q86XR8 500 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 PROM2Q8N271 834 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 SPATA5Q8NB90 893 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 APPBP2Q92624 585 aa12.71□□□□□ -0.38
DDX39B-214ENST00000458640 CELF1Q92879 486 aaKnown RBP12.71□□□□□ -0.38
DDX39B-214ENST00000458640 DTNBP1Q96EV8 351 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms