RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 KIF4BQ2VIQ3 1234 aa16■□□□□ 0.15
SCFD1-203ENST00000458591 PARP10Q53GL7 1025 aa16■□□□□ 0.15
SCFD1-203ENST00000458591 TYW1BQ6NUM6 668 aa16■□□□□ 0.15
SCFD1-203ENST00000458591 RASGRP2Q7LDG7 609 aa16■□□□□ 0.15
SCFD1-203ENST00000458591 NELFBQ8WX92 580 aa16■□□□□ 0.15
SCFD1-203ENST00000458591 RHOXF2Q9BQY4 288 aa16■□□□□ 0.15
SCFD1-203ENST00000458591 TXLNAP40222 546 aa16■□□□□ 0.15
SCFD1-203ENST00000458591 PRCPP42785 496 aa16■□□□□ 0.15
SCFD1-203ENST00000458591 COPB1P53618 953 aaKnown RBP16■□□□□ 0.15
SCFD1-203ENST00000458591 LONRF2Q1L5Z9 754 aa16■□□□□ 0.15
SCFD1-203ENST00000458591 RABGGTAQ92696 567 aa16■□□□□ 0.15
SCFD1-203ENST00000458591 NSUN4Q96CB9 384 aaKnown RBP16■□□□□ 0.15
SCFD1-203ENST00000458591 NUP88Q99567 741 aaPredicted RBP16■□□□□ 0.15
SCFD1-203ENST00000458591 DCP1AQ9NPI6 582 aaPredicted RBP16■□□□□ 0.15
SCFD1-203ENST00000458591 KIF5CO60282 957 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 USP17L8P0C7I0 530 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 SCG2P13521 617 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 FILIP1LQ4L180 1135 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 SRGAP1Q7Z6B7 1085 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 TXNRD3Q86VQ6 643 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 MARCH10Q8NA82 808 aaPredicted RBP15.99■□□□□ 0.15
SCFD1-203ENST00000458591 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
SCFD1-203ENST00000458591 LRRC15Q8TF66 581 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 BRIP1Q9BX63 1249 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 BRMS1Q9HCU9 246 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 ARFGAP3Q9NP61 516 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 ABHD10Q9NUJ1 306 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 RBM28Q9NW13 759 aaKnown RBP15.99■□□□□ 0.15
SCFD1-203ENST00000458591 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCFD1-203ENST00000458591 DUOX1Q9NRD9 1551 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 ADAMTS2O95450 1211 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 ARHGAP25P42331 645 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 CAVIN4Q5BKX8 364 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 IQUBQ8NA54 791 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 DYNLL2Q96FJ2 89 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 CPVLQ9H3G5 476 aa15.99■□□□□ 0.15
SCFD1-203ENST00000458591 GNL3LQ9NVN8 582 aaKnown RBP15.99■□□□□ 0.15
SCFD1-203ENST00000458591 KCNJ18B7U540 433 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 ATP8B1O43520 1251 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 HNRNPH2P55795 449 aaKnown RBP15.98■□□□□ 0.15
SCFD1-203ENST00000458591 KCNJ12Q14500 433 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 RCSD1Q6JBY9 416 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 IRF2BP1Q8IU81 584 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 C4orf32Q8N8J7 132 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 TMEM60Q9H2L4 133 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 LIMA1Q9UHB6 759 aaKnown RBP15.98■□□□□ 0.15
SCFD1-203ENST00000458591 CDC23Q9UJX2 597 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 NKRFO15226 690 aaKnown RBP eCLIP15.98■□□□□ 0.15
SCFD1-203ENST00000458591 RPN1P04843 607 aaKnown RBP15.98■□□□□ 0.15
SCFD1-203ENST00000458591 FGRP09769 529 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 PAK1Q13153 545 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 MCM6Q14566 821 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 SLC35G1Q2M3R5 365 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 TCP11X2Q5H9J9 407 aa15.98■□□□□ 0.15
SCFD1-203ENST00000458591 REXO2Q9Y3B8 237 aaKnown RBP15.98■□□□□ 0.15
SCFD1-203ENST00000458591 CACNA1SQ13698 1873 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 PLCH1Q4KWH8 1693 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 MYH6P13533 1939 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 TSPY2A6NKD2 308 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 PES1O00541 588 aaKnown RBP15.97■□□□□ 0.15
SCFD1-203ENST00000458591 N4BP1O75113 896 aaKnown RBP15.97■□□□□ 0.15
SCFD1-203ENST00000458591 KRT9P35527 623 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 UBXN1Q04323 297 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 PPP2R5BQ15173 497 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 NCAPH2Q6IBW4 605 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 CTAGE1Q96RT6 745 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 RNF216Q9NWF9 866 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-203ENST00000458591 ENC1O14682 589 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 GTPBP6O43824 516 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-203ENST00000458591 DDAH1O94760 285 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 UBE4AQ14139 1066 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 DDB1Q16531 1140 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 PFKFB3Q16875 520 aaPredicted RBP15.97■□□□□ 0.15
SCFD1-203ENST00000458591 NOA1Q8NC60 698 aaKnown RBP15.97■□□□□ 0.15
SCFD1-203ENST00000458591 PODXL2Q9NZ53 605 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 HDAC6Q9UBN7 1215 aa15.97■□□□□ 0.15
SCFD1-203ENST00000458591 KLK7P49862 253 aa15.96■□□□□ 0.15
SCFD1-203ENST00000458591 NAALADL2Q58DX5 795 aa15.96■□□□□ 0.15
SCFD1-203ENST00000458591 GPIHBP1Q8IV16 184 aa15.96■□□□□ 0.15
SCFD1-203ENST00000458591 CNGA4Q8IV77 575 aa15.96■□□□□ 0.15
SCFD1-203ENST00000458591 NAA15Q9BXJ9 866 aaKnown RBP15.96■□□□□ 0.15
SCFD1-203ENST00000458591 ABCB6Q9NP58 842 aa15.96■□□□□ 0.15
SCFD1-203ENST00000458591 IL17RBQ9NRM6 502 aa15.96■□□□□ 0.15
SCFD1-203ENST00000458591 BSDC1Q9NW68 430 aaPredicted RBP15.96■□□□□ 0.15
SCFD1-203ENST00000458591 RWDD2AQ9UIY3 292 aa15.96■□□□□ 0.15
SCFD1-203ENST00000458591 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.14
SCFD1-203ENST00000458591 USP17L3A6NCW0 530 aa15.95■□□□□ 0.14
SCFD1-203ENST00000458591 USP17L4A6NCW7 530 aa15.95■□□□□ 0.14
SCFD1-203ENST00000458591 GTF2E1P29083 439 aaPredicted RBP15.95■□□□□ 0.14
SCFD1-203ENST00000458591 ZNF658Q5TYW1 1059 aaPredicted RBP15.95■□□□□ 0.14
SCFD1-203ENST00000458591 USP17L1Q7RTZ2 530 aa15.95■□□□□ 0.14
SCFD1-203ENST00000458591 PDE11AQ9HCR9 933 aa15.95■□□□□ 0.14
SCFD1-203ENST00000458591 MCM9Q9NXL9 1143 aa15.95■□□□□ 0.14
SCFD1-203ENST00000458591 GUCA1BQ9UMX6 200 aa15.95■□□□□ 0.14
SCFD1-203ENST00000458591 TTC26A0AVF1 554 aa15.95■□□□□ 0.14
SCFD1-203ENST00000458591 CTAGE9A4FU28 777 aa15.95■□□□□ 0.14
SCFD1-203ENST00000458591 PARP1P09874 1014 aaKnown RBP15.95■□□□□ 0.14
SCFD1-203ENST00000458591 GOLGA8HP0CJ92 632 aa15.95■□□□□ 0.14
SCFD1-203ENST00000458591 CALM1P0DP23 149 aa15.95■□□□□ 0.14
SCFD1-203ENST00000458591 CALM2P0DP24 149 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms