RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 C17orf99Q6UX52 265 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 CATSPERGQ6ZRH7 1159 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 ANKS1AQ92625 1134 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 LPAR1Q92633 364 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 KCNB2Q92953 911 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 TTC14Q96N46 770 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 P2RX7Q99572 595 aaKnown RBP11.86□□□□□ -0.51
ATG4A-206ENST00000457035 USP26Q9BXU7 913 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 ASCC2Q9H1I8 757 aaPredicted RBP11.86□□□□□ -0.51
ATG4A-206ENST00000457035 SH2D4AQ9H788 454 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 SYNPO2Q9UMS6 1093 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 ADGRA2Q96PE1 1338 aa11.86□□□□□ -0.51
ATG4A-206ENST00000457035 BAZ2BQ9UIF8 2168 aaKnown RBP11.85□□□□□ -0.51
ATG4A-206ENST00000457035 USP17L15C9J2P7 530 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 USP17L13C9JLJ4 530 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 USP17L11C9JVI0 530 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 USP17L18D6R9N7 530 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 USP17L22D6RA61 530 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 USP17L17D6RBQ6 530 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 USP17L19D6RCP7 530 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 USP17L20D6RJB6 530 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 EPB41L2O43491 1005 aaKnown RBP11.85□□□□□ -0.51
ATG4A-206ENST00000457035 OSBPP22059 807 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 HSPA4P34932 840 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 USP17L24Q0WX57 530 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 PABPC4Q13310 644 aaKnown RBP eCLIP11.85□□□□□ -0.51
ATG4A-206ENST00000457035 COL9A3Q14050 684 aaPredicted RBP11.85□□□□□ -0.51
ATG4A-206ENST00000457035 PPP4R3BQ5MIZ7 849 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 POTEEQ6S8J3 1075 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 CYB5R4Q7L1T6 521 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 DGKHQ86XP1 1220 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 SPICE1Q8N0Z3 855 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 NCOA7Q8NI08 942 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 TMEM47Q9BQJ4 181 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 ZKSCAN3Q9BRR0 538 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 STX8Q9UNK0 236 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 SMCHD1A6NHR9 2005 aa11.85□□□□□ -0.51
ATG4A-206ENST00000457035 NDUFB10O96000 172 aa11.84□□□□□ -0.51
ATG4A-206ENST00000457035 BCRP11274 1271 aa11.84□□□□□ -0.51
ATG4A-206ENST00000457035 TRDNQ13061 729 aa11.84□□□□□ -0.51
ATG4A-206ENST00000457035 IQCA1Q86XH1 822 aa11.84□□□□□ -0.51
ATG4A-206ENST00000457035 MB21D2Q8IYB1 491 aaPredicted RBP11.84□□□□□ -0.51
ATG4A-206ENST00000457035 LRRC47Q8N1G4 583 aaKnown RBP11.84□□□□□ -0.51
ATG4A-206ENST00000457035 GMCL1P1Q8NEA9 526 aa11.84□□□□□ -0.51
ATG4A-206ENST00000457035 ZNF296Q8WUU4 475 aaPredicted RBP11.84□□□□□ -0.51
ATG4A-206ENST00000457035 ZSCAN10Q96SZ4 725 aaPredicted RBP11.84□□□□□ -0.51
ATG4A-206ENST00000457035 PARK7Q99497 189 aaKnown RBP11.84□□□□□ -0.51
ATG4A-206ENST00000457035 RPAP3Q9H6T3 665 aaPredicted RBP11.84□□□□□ -0.51
ATG4A-206ENST00000457035 GOPCQ9HD26 462 aa11.84□□□□□ -0.51
ATG4A-206ENST00000457035 PNMA3Q9UL41 463 aa11.84□□□□□ -0.51
ATG4A-206ENST00000457035 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
ATG4A-206ENST00000457035 MGAMO43451 1857 aa11.83□□□□□ -0.52
ATG4A-206ENST00000457035 WDR46O15213 610 aaKnown RBP11.83□□□□□ -0.52
ATG4A-206ENST00000457035 SEC24BO95487 1268 aa11.83□□□□□ -0.52
ATG4A-206ENST00000457035 TOP1P11387 765 aaKnown RBP11.83□□□□□ -0.52
ATG4A-206ENST00000457035 ANTXR2P58335 489 aa11.83□□□□□ -0.52
ATG4A-206ENST00000457035 IRX3P78415 501 aaPredicted RBP11.83□□□□□ -0.52
ATG4A-206ENST00000457035 COG2Q14746 738 aa11.83□□□□□ -0.52
ATG4A-206ENST00000457035 SEC23AQ15436 765 aa11.83□□□□□ -0.52
ATG4A-206ENST00000457035 CCDC178Q5BJE1 867 aa11.83□□□□□ -0.52
ATG4A-206ENST00000457035 RNF20Q5VTR2 975 aa11.83□□□□□ -0.52
ATG4A-206ENST00000457035 SLFN13Q68D06 897 aa11.83□□□□□ -0.52
ATG4A-206ENST00000457035 ENAHQ8N8S7 591 aaPredicted RBP11.83□□□□□ -0.52
ATG4A-206ENST00000457035 HOXC10Q9NYD6 342 aa11.83□□□□□ -0.52
ATG4A-206ENST00000457035 CPA4Q9UI42 421 aa11.83□□□□□ -0.52
ATG4A-206ENST00000457035 HPS5Q9UPZ3 1129 aa11.83□□□□□ -0.52
ATG4A-206ENST00000457035 ZNFX1Q9P2E3 1918 aaKnown RBP11.83□□□□□ -0.52
ATG4A-206ENST00000457035 COL11A1P12107 1806 aaPredicted RBP11.83□□□□□ -0.52
ATG4A-206ENST00000457035 PDE4DIPQ5VU43 2346 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 FKTNO75072 461 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 SLC34A2O95436 690 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 MCCP23508 829 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 GCLCP48506 637 aaPredicted RBP11.82□□□□□ -0.52
ATG4A-206ENST00000457035 HERVK_113P62684 666 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 CAP1Q01518 475 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 SP3Q02447 781 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 ADCK5Q3MIX3 580 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 C8orf34Q49A92 452 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 FAM83BQ5T0W9 1011 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 LBX2Q6XYB7 198 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 CHST3Q7LGC8 479 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 RALYLQ86SE5 291 aaKnown RBP11.82□□□□□ -0.52
ATG4A-206ENST00000457035 IGDCC4Q8TDY8 1250 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 SMCR8Q8TEV9 937 aaPredicted RBP11.82□□□□□ -0.52
ATG4A-206ENST00000457035 NUP88Q99567 741 aaPredicted RBP11.82□□□□□ -0.52
ATG4A-206ENST00000457035 TXNRD2Q9NNW7 524 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 RBPJLQ9UBG7 517 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 ADAMTS5Q9UNA0 930 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 TNKSO95271 1327 aa11.82□□□□□ -0.52
ATG4A-206ENST00000457035 SPDYE16A6NNV3 312 aaPredicted RBP11.81□□□□□ -0.52
ATG4A-206ENST00000457035 RAD21O60216 631 aa11.81□□□□□ -0.52
ATG4A-206ENST00000457035 PEX10O60683 326 aa11.81□□□□□ -0.52
ATG4A-206ENST00000457035 ZKSCAN1P17029 563 aaPredicted RBP11.81□□□□□ -0.52
ATG4A-206ENST00000457035 EXOSC10Q01780 885 aaKnown RBP11.81□□□□□ -0.52
ATG4A-206ENST00000457035 Q3C1V9 767 aa11.81□□□□□ -0.52
ATG4A-206ENST00000457035 ANKRD13CQ8N6S4 541 aa11.81□□□□□ -0.52
ATG4A-206ENST00000457035 GMCL1Q96IK5 515 aa11.81□□□□□ -0.52
ATG4A-206ENST00000457035 NEK1Q96PY6 1258 aa11.81□□□□□ -0.52
ATG4A-206ENST00000457035 MTA3Q9BTC8 594 aa11.81□□□□□ -0.52
ATG4A-206ENST00000457035 TANGO6Q9C0B7 1094 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms