RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 PTPN21Q16825 1174 aa20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 HSP90AA4PQ58FG1 418 aa20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 PRR5LQ6MZQ0 368 aa20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 CGNQ9P2M7 1197 aaKnown RBP20.9■□□□□ 0.94
SEMA3B-209ENST00000456560 APBA3O96018 575 aa20.89■□□□□ 0.94
SEMA3B-209ENST00000456560 CD44P16070 742 aaKnown RBP20.89■□□□□ 0.94
SEMA3B-209ENST00000456560 CDK11BP21127 795 aaKnown RBP20.89■□□□□ 0.94
SEMA3B-209ENST00000456560 GPSM2P81274 684 aa20.89■□□□□ 0.94
SEMA3B-209ENST00000456560 STAG2Q8N3U4 1231 aa20.89■□□□□ 0.94
SEMA3B-209ENST00000456560 C4orf32Q8N8J7 132 aa20.89■□□□□ 0.94
SEMA3B-209ENST00000456560 MAD2L2Q9UI95 211 aa20.89■□□□□ 0.94
SEMA3B-209ENST00000456560 CCP110O43303 1012 aa20.89■□□□□ 0.93
SEMA3B-209ENST00000456560 CASP1P29466 404 aa20.89■□□□□ 0.93
SEMA3B-209ENST00000456560 GOLGA8FQ08AF8 430 aa20.89■□□□□ 0.93
SEMA3B-209ENST00000456560 GOLGA8DPQ0D2H9 430 aa20.89■□□□□ 0.93
SEMA3B-209ENST00000456560 NAA30Q147X3 362 aaPredicted RBP20.89■□□□□ 0.93
SEMA3B-209ENST00000456560 NR1I3Q14994 352 aa20.89■□□□□ 0.93
SEMA3B-209ENST00000456560 SLC35G1Q2M3R5 365 aa20.89■□□□□ 0.93
SEMA3B-209ENST00000456560 FCHSD1Q86WN1 690 aa20.89■□□□□ 0.93
SEMA3B-209ENST00000456560 BLIDQ8IZY5 108 aa20.89■□□□□ 0.93
SEMA3B-209ENST00000456560 GPR101Q96P66 508 aaPredicted RBP20.89■□□□□ 0.93
SEMA3B-209ENST00000456560 RTFDC1Q9BY42 306 aaPredicted RBP20.89■□□□□ 0.93
SEMA3B-209ENST00000456560 NAV1Q8NEY1 1877 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 GNAQP50148 359 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 SPATA1Q5VX52 437 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 PROM2Q8N271 834 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 TGFBRAP1Q8WUH2 860 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 MKNK2Q9HBH9 465 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 PCDHA4Q9UN74 947 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 USP17L3A6NCW0 530 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 USP17L4A6NCW7 530 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 PPP1R3GB7ZBB8 358 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 KIF20AO95235 890 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 ADRA2BP18089 450 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 CRY2Q49AN0 593 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 SPECC1LQ69YQ0 1117 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 USP17L1Q7RTZ2 530 aa20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 APTXQ7Z2E3 356 aaKnown RBP20.88■□□□□ 0.93
SEMA3B-209ENST00000456560 FAM205AQ6ZU69 1335 aa20.87■□□□□ 0.93
SEMA3B-209ENST00000456560 A0A1B0GTH6 734 aa20.87■□□□□ 0.93
SEMA3B-209ENST00000456560 M0R2N6 131 aa20.87■□□□□ 0.93
SEMA3B-209ENST00000456560 MCM7P33993 719 aa20.87■□□□□ 0.93
SEMA3B-209ENST00000456560 ARL6IP4Q66PJ3 421 aaKnown RBP20.87■□□□□ 0.93
SEMA3B-209ENST00000456560 PDXDC2PQ6P474 469 aa20.87■□□□□ 0.93
SEMA3B-209ENST00000456560 AMOTL1Q8IY63 956 aa20.87■□□□□ 0.93
SEMA3B-209ENST00000456560 IQUBQ8NA54 791 aa20.87■□□□□ 0.93
SEMA3B-209ENST00000456560 GPKOWQ92917 476 aaPredicted RBP eCLIP20.87■□□□□ 0.93
SEMA3B-209ENST00000456560 L2HGDHQ9H9P8 463 aa20.87■□□□□ 0.93
SEMA3B-209ENST00000456560 REXO1L1PQ8IX06 675 aa20.86■□□□□ 0.93
SEMA3B-209ENST00000456560 PYM1Q9BRP8 204 aaKnown RBP20.86■□□□□ 0.93
SEMA3B-209ENST00000456560 CD209Q9NNX6 404 aa20.86■□□□□ 0.93
SEMA3B-209ENST00000456560 ZNF215Q9UL58 517 aaPredicted RBP20.86■□□□□ 0.93
SEMA3B-209ENST00000456560 TSPY3P0CV98 308 aa20.86■□□□□ 0.93
SEMA3B-209ENST00000456560 TSPY8P0CW00 308 aa20.86■□□□□ 0.93
SEMA3B-209ENST00000456560 RASA1P20936 1047 aa20.86■□□□□ 0.93
SEMA3B-209ENST00000456560 TXNRD1Q16881 649 aa20.86■□□□□ 0.93
SEMA3B-209ENST00000456560 TYW1BQ6NUM6 668 aa20.86■□□□□ 0.93
SEMA3B-209ENST00000456560 ZNF444Q8N0Y2 327 aaPredicted RBP20.86■□□□□ 0.93
SEMA3B-209ENST00000456560 TC2NQ8N9U0 490 aa20.86■□□□□ 0.93
SEMA3B-209ENST00000456560 SLC44A5Q8NCS7 719 aa20.86■□□□□ 0.93
SEMA3B-209ENST00000456560 PALM3A6NDB9 673 aaPredicted RBP20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 ARHGAP6O43182 974 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 IL1R1P14778 569 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 ATP2B4P23634 1241 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 CDKAL1Q5VV42 579 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 SYT10Q6XYQ8 523 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 CERS3Q8IU89 383 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 MAPKAPK5Q8IW41 473 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 DAGLBQ8NCG7 672 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 RPGRQ92834 1020 aaKnown RBP20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 CDK5RAP2Q96SN8 1893 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 GPR75-ASB3A0A0A6YYF3 556 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 CYTH3O43739 400 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 ERO1AQ96HE7 468 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 MTRQ99707 1265 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 TMEM47Q9BQJ4 181 aa20.85■□□□□ 0.93
SEMA3B-209ENST00000456560 SYNRGQ9UMZ2 1314 aa20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 GTPBP6O43824 516 aaPredicted RBP20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 LONP1P36776 959 aaKnown RBP20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 CCDC93Q567U6 631 aa20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 TRIM65Q6PJ69 517 aa20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 UFL1O94874 794 aa20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 SLU7O95391 586 aaKnown RBP20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 GYS1P13807 737 aa20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 BTDP43251 543 aa20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 ETF1P62495 437 aaKnown RBP20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 WWC2Q6AWC2 1192 aa20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 STAMQ92783 540 aa20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 BAG1Q99933 345 aaPredicted RBP20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 SAP30BPQ9UHR5 308 aaKnown RBP20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 PCDHA6Q9UN73 950 aa20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 PCDHA8Q9Y5H6 950 aa20.84■□□□□ 0.93
SEMA3B-209ENST00000456560 STX10O60499 249 aa20.83■□□□□ 0.93
SEMA3B-209ENST00000456560 STX17P56962 302 aa20.83■□□□□ 0.93
SEMA3B-209ENST00000456560 GALNT17Q6IS24 598 aa20.83■□□□□ 0.93
SEMA3B-209ENST00000456560 KLHL10Q6JEL2 608 aa20.83■□□□□ 0.93
SEMA3B-209ENST00000456560 SMYD4Q8IYR2 804 aaPredicted RBP20.83■□□□□ 0.93
SEMA3B-209ENST00000456560 FAM177A1Q8N128 213 aaPredicted RBP20.83■□□□□ 0.93
SEMA3B-209ENST00000456560 DDX41Q9UJV9 622 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms