RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TSPY8P0CW00 308 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 COPB2P35606 906 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 MCMDC2Q4G0Z9 681 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 MFSD14CQ5VZR4 134 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 ABRAQ8N0Z2 381 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 NEDD1Q8NHV4 660 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 SLC5A4Q9NY91 659 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 PPP1R9AQ9ULJ8 1098 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 ADAMTS5Q9UNA0 930 aa21.24■□□□□ 0.99
MSH6-207ENST00000456246 TTLL1O95922 423 aa21.23■□□□□ 0.99
MSH6-207ENST00000456246 ERCC3P19447 782 aa21.23■□□□□ 0.99
MSH6-207ENST00000456246 TRIM32Q13049 653 aa21.23■□□□□ 0.99
MSH6-207ENST00000456246 ALX1Q15699 326 aa21.23■□□□□ 0.99
MSH6-207ENST00000456246 FAM83BQ5T0W9 1011 aa21.23■□□□□ 0.99
MSH6-207ENST00000456246 CCDC129Q6ZRS4 1044 aa21.23■□□□□ 0.99
MSH6-207ENST00000456246 MKL1Q969V6 931 aa21.23■□□□□ 0.99
MSH6-207ENST00000456246 CEP95Q96GE4 821 aa21.23■□□□□ 0.99
MSH6-207ENST00000456246 MTMR4Q9NYA4 1195 aa21.23■□□□□ 0.99
MSH6-207ENST00000456246 ANAPC4Q9UJX5 808 aa21.23■□□□□ 0.99
MSH6-207ENST00000456246 MYH4Q9Y623 1939 aa21.22■□□□□ 0.99
MSH6-207ENST00000456246 F5H6K3 240 aa21.22■□□□□ 0.99
MSH6-207ENST00000456246 FOXP2O15409 715 aa21.22■□□□□ 0.99
MSH6-207ENST00000456246 MFAP1P55081 439 aaKnown RBP21.22■□□□□ 0.99
MSH6-207ENST00000456246 KLRC3Q07444 240 aa21.22■□□□□ 0.99
MSH6-207ENST00000456246 PLS1Q14651 629 aa21.22■□□□□ 0.99
MSH6-207ENST00000456246 PLEKHM2Q8IWE5 1019 aa21.22■□□□□ 0.99
MSH6-207ENST00000456246 CLIP2Q9UDT6 1046 aa21.22■□□□□ 0.99
MSH6-207ENST00000456246 ZMYM6O95789 1325 aa21.22■□□□□ 0.99
MSH6-207ENST00000456246 CEP290O15078 2479 aa21.21■□□□□ 0.99
MSH6-207ENST00000456246 VWA5AO00534 786 aa21.21■□□□□ 0.99
MSH6-207ENST00000456246 NDUFB10O96000 172 aa21.21■□□□□ 0.99
MSH6-207ENST00000456246 CACNB2Q08289 660 aaPredicted RBP21.21■□□□□ 0.99
MSH6-207ENST00000456246 CCL14Q16627 93 aa21.21■□□□□ 0.99
MSH6-207ENST00000456246 DPP9Q86TI2 863 aa21.21■□□□□ 0.99
MSH6-207ENST00000456246 NCAPG2Q86XI2 1143 aa21.21■□□□□ 0.99
MSH6-207ENST00000456246 GMCL1P1Q8NEA9 526 aa21.21■□□□□ 0.99
MSH6-207ENST00000456246 RILPL2Q969X0 211 aa21.21■□□□□ 0.99
MSH6-207ENST00000456246 SLF1Q9BQI6 1058 aa21.21■□□□□ 0.99
MSH6-207ENST00000456246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.21■□□□□ 0.99
MSH6-207ENST00000456246 A0A0D9SFI3 127 aa21.2■□□□□ 0.98
MSH6-207ENST00000456246 ADORA2AP29274 412 aa21.2■□□□□ 0.98
MSH6-207ENST00000456246 TFAP4Q01664 338 aa21.2■□□□□ 0.98
MSH6-207ENST00000456246 TMEM132BQ14DG7 1078 aa21.2■□□□□ 0.98
MSH6-207ENST00000456246 SAMD1Q6SPF0 538 aaPredicted RBP21.2■□□□□ 0.98
MSH6-207ENST00000456246 NECAB2Q7Z6G3 386 aa21.2■□□□□ 0.98
MSH6-207ENST00000456246 RIOX2Q8IUF8 465 aa21.2■□□□□ 0.98
MSH6-207ENST00000456246 DPF3Q92784 378 aa21.2■□□□□ 0.98
MSH6-207ENST00000456246 FAM227BQ96M60 508 aa21.2■□□□□ 0.98
MSH6-207ENST00000456246 FBXO28Q9NVF7 368 aa21.2■□□□□ 0.98
MSH6-207ENST00000456246 OGDHLQ9ULD0 1010 aa21.2■□□□□ 0.98
MSH6-207ENST00000456246 TSPY2A6NKD2 308 aa21.19■□□□□ 0.98
MSH6-207ENST00000456246 HIP1O00291 1037 aa21.19■□□□□ 0.98
MSH6-207ENST00000456246 MSCO60682 206 aa21.19■□□□□ 0.98
MSH6-207ENST00000456246 FCER1AP12319 257 aa21.19■□□□□ 0.98
MSH6-207ENST00000456246 VPS53Q5VIR6 699 aa21.19■□□□□ 0.98
MSH6-207ENST00000456246 OLFML2BQ68BL8 750 aa21.19■□□□□ 0.98
MSH6-207ENST00000456246 PRPF38AQ8NAV1 312 aaKnown RBP21.19■□□□□ 0.98
MSH6-207ENST00000456246 CCDC171Q6TFL3 1326 aa21.19■□□□□ 0.98
MSH6-207ENST00000456246 COL11A1P12107 1806 aaPredicted RBP21.18■□□□□ 0.98
MSH6-207ENST00000456246 ORC4O43929 436 aa21.18■□□□□ 0.98
MSH6-207ENST00000456246 STAT3P40763 770 aa21.18■□□□□ 0.98
MSH6-207ENST00000456246 NMIQ13287 307 aaPredicted RBP21.18■□□□□ 0.98
MSH6-207ENST00000456246 TEX13BQ9BXU2 312 aa21.18■□□□□ 0.98
MSH6-207ENST00000456246 FEM1BQ9UK73 627 aa21.18■□□□□ 0.98
MSH6-207ENST00000456246 ZNF214Q9UL59 606 aaPredicted RBP21.18■□□□□ 0.98
MSH6-207ENST00000456246 NR2E3Q9Y5X4 410 aa21.18■□□□□ 0.98
MSH6-207ENST00000456246 FDX1P10109 184 aa21.17■□□□□ 0.98
MSH6-207ENST00000456246 HSPD1P10809 573 aaKnown RBP21.17■□□□□ 0.98
MSH6-207ENST00000456246 PCP11498 1178 aaKnown RBP21.17■□□□□ 0.98
MSH6-207ENST00000456246 SDSP20132 328 aa21.17■□□□□ 0.98
MSH6-207ENST00000456246 FAM47AQ5JRC9 791 aa21.17■□□□□ 0.98
MSH6-207ENST00000456246 REPS2Q8NFH8 660 aa21.17■□□□□ 0.98
MSH6-207ENST00000456246 NPLOC4Q8TAT6 608 aa21.17■□□□□ 0.98
MSH6-207ENST00000456246 PAWRQ96IZ0 340 aaKnown RBP21.17■□□□□ 0.98
MSH6-207ENST00000456246 NUP88Q99567 741 aaPredicted RBP21.17■□□□□ 0.98
MSH6-207ENST00000456246 NBPF3Q9H094 633 aa21.17■□□□□ 0.98
MSH6-207ENST00000456246 FLRT1Q9NZU1 646 aa21.17■□□□□ 0.98
MSH6-207ENST00000456246 ATP2A1O14983 1001 aa21.16■□□□□ 0.98
MSH6-207ENST00000456246 FGAP02671 866 aa21.16■□□□□ 0.98
MSH6-207ENST00000456246 FGRP09769 529 aa21.16■□□□□ 0.98
MSH6-207ENST00000456246 CCND3P30281 292 aaPredicted RBP21.16■□□□□ 0.98
MSH6-207ENST00000456246 CTDSPL2Q05D32 466 aa21.16■□□□□ 0.98
MSH6-207ENST00000456246 KCTD2Q14681 263 aa21.16■□□□□ 0.98
MSH6-207ENST00000456246 LRRC47Q8N1G4 583 aaKnown RBP21.16■□□□□ 0.98
MSH6-207ENST00000456246 GMCL1Q96IK5 515 aa21.16■□□□□ 0.98
MSH6-207ENST00000456246 DIAPH3Q9NSV4 1193 aa21.16■□□□□ 0.98
MSH6-207ENST00000456246 CTDP1Q9Y5B0 961 aaPredicted RBP21.16■□□□□ 0.98
MSH6-207ENST00000456246 RANBP6O60518 1105 aaKnown RBP21.15■□□□□ 0.98
MSH6-207ENST00000456246 ZBED4O75132 1171 aa21.15■□□□□ 0.98
MSH6-207ENST00000456246 IGHA2P01877 340 aa21.15■□□□□ 0.98
MSH6-207ENST00000456246 BMP3P12645 472 aa21.15■□□□□ 0.98
MSH6-207ENST00000456246 NT5C2P49902 561 aa21.15■□□□□ 0.98
MSH6-207ENST00000456246 SLFN13Q68D06 897 aa21.15■□□□□ 0.98
MSH6-207ENST00000456246 ZNF589Q86UQ0 364 aaPredicted RBP21.15■□□□□ 0.98
MSH6-207ENST00000456246 MMP19Q99542 508 aa21.15■□□□□ 0.98
MSH6-207ENST00000456246 STX8Q9UNK0 236 aa21.15■□□□□ 0.98
MSH6-207ENST00000456246 DIS3Q9Y2L1 958 aaKnown RBP21.15■□□□□ 0.98
MSH6-207ENST00000456246 H0YGN5 161 aa21.14■□□□□ 0.97
MSH6-207ENST00000456246 OAZ1P54368 228 aa21.14■□□□□ 0.97
MSH6-207ENST00000456246 EVI5O60447 810 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms