RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 GMCL1Q96IK5 515 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 TMX3Q96JJ7 454 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 PALM3A6NDB9 673 aaPredicted RBP12.54□□□□□ -0.4
SYPL1-202ENST00000455385 PFKFB2O60825 505 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 ADD1P35611 737 aaKnown RBP12.54□□□□□ -0.4
SYPL1-202ENST00000455385 SLC1A4P43007 532 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 C1QTNF8P60827 252 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 ZNF543Q08ER8 600 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 SCRN1Q12765 414 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 SNAPC2Q13487 334 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 SLC35G1Q2M3R5 365 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 TREML2Q5T2D2 321 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 GPAT2Q6NUI2 795 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 NBPF11Q86T75 865 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 CCDC102AQ96A19 550 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 CPVLQ9H3G5 476 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 GPCPD1Q9NPB8 672 aa12.54□□□□□ -0.4
SYPL1-202ENST00000455385 MCM2P49736 904 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 GTF2A2P52657 109 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 GADL1Q6ZQY3 521 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 CMTR1Q8N1G2 835 aaKnown RBP12.53□□□□□ -0.4
SYPL1-202ENST00000455385 DCAF4Q8WV16 495 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 BRI3BPQ8WY22 251 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 LPAR1Q92633 364 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 MAP3K14Q99558 947 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 PTPN18Q99952 460 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
SYPL1-202ENST00000455385 TMOD4Q9NZQ9 345 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 BAZ2BQ9UIF8 2168 aaKnown RBP12.53□□□□□ -0.4
SYPL1-202ENST00000455385 GOLGA8AA7E2F4 631 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 PLEKHA8P1O95397 391 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 PARP1P09874 1014 aaKnown RBP12.53□□□□□ -0.4
SYPL1-202ENST00000455385 CALM1P0DP23 149 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 CALM2P0DP24 149 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 CALM3P0DP25 149 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 BMP3P12645 472 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 METAP2P50579 478 aaKnown RBP eCLIP12.53□□□□□ -0.4
SYPL1-202ENST00000455385 RCAN1P53805 252 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 GRM1Q13255 1194 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 PAXIP1Q6ZW49 1069 aaPredicted RBP12.53□□□□□ -0.4
SYPL1-202ENST00000455385 ZSCAN31Q96LW9 406 aaPredicted RBP12.53□□□□□ -0.4
SYPL1-202ENST00000455385 UBA5Q9GZZ9 404 aa12.53□□□□□ -0.4
SYPL1-202ENST00000455385 RPAP3Q9H6T3 665 aaPredicted RBP12.53□□□□□ -0.4
SYPL1-202ENST00000455385 CCL15-CCL14A0A0B4J2E2 113 aa12.52□□□□□ -0.4
SYPL1-202ENST00000455385 WDR46O15213 610 aaKnown RBP12.52□□□□□ -0.4
SYPL1-202ENST00000455385 CETPP11597 493 aa12.52□□□□□ -0.4
SYPL1-202ENST00000455385 SLC16A2P36021 539 aa12.52□□□□□ -0.4
SYPL1-202ENST00000455385 NTRK3Q16288 839 aa12.52□□□□□ -0.4
SYPL1-202ENST00000455385 CCL15Q16663 113 aa12.52□□□□□ -0.4
SYPL1-202ENST00000455385 RTN1Q16799 776 aa12.52□□□□□ -0.4
SYPL1-202ENST00000455385 CCDC96Q2M329 555 aa12.52□□□□□ -0.4
SYPL1-202ENST00000455385 SRBD1Q8N5C6 995 aaKnown RBP12.52□□□□□ -0.4
SYPL1-202ENST00000455385 PROCA1Q8NCQ7 364 aaPredicted RBP12.52□□□□□ -0.4
SYPL1-202ENST00000455385 FBXO28Q9NVF7 368 aa12.52□□□□□ -0.4
SYPL1-202ENST00000455385 NID2Q14112 1375 aa12.52□□□□□ -0.41
SYPL1-202ENST00000455385 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.41
SYPL1-202ENST00000455385 TMEM232C9JQI7 657 aa12.52□□□□□ -0.41
SYPL1-202ENST00000455385 KLRF2D3W0D1 207 aa12.52□□□□□ -0.41
SYPL1-202ENST00000455385 AOC2O75106 756 aa12.52□□□□□ -0.41
SYPL1-202ENST00000455385 PPFIA3O75145 1194 aa12.52□□□□□ -0.41
SYPL1-202ENST00000455385 CTDNEP1O95476 244 aa12.52□□□□□ -0.41
SYPL1-202ENST00000455385 FUT2Q10981 343 aa12.52□□□□□ -0.41
SYPL1-202ENST00000455385 FASTKD5Q7L8L6 764 aaKnown RBP12.52□□□□□ -0.41
SYPL1-202ENST00000455385 CCDC82Q8N4S0 544 aa12.52□□□□□ -0.41
SYPL1-202ENST00000455385 CTCFLQ8NI51 663 aaPredicted RBP12.52□□□□□ -0.41
SYPL1-202ENST00000455385 GTF3C6Q969F1 213 aa12.52□□□□□ -0.41
SYPL1-202ENST00000455385 CAPNS2Q96L46 248 aa12.52□□□□□ -0.41
SYPL1-202ENST00000455385 BTBD19C9JJ37 291 aa12.51□□□□□ -0.41
SYPL1-202ENST00000455385 CYTH3O43739 400 aa12.51□□□□□ -0.41
SYPL1-202ENST00000455385 ASPRV1Q53RT3 343 aa12.51□□□□□ -0.41
SYPL1-202ENST00000455385 GPATCH4Q5T3I0 446 aaKnown RBP12.51□□□□□ -0.41
SYPL1-202ENST00000455385 CATSPERGQ6ZRH7 1159 aa12.51□□□□□ -0.41
SYPL1-202ENST00000455385 CCDC83Q8IWF9 413 aa12.51□□□□□ -0.41
SYPL1-202ENST00000455385 LOC285556D6RIA3 1793 aa12.51□□□□□ -0.41
SYPL1-202ENST00000455385 K7ELQ4 463 aaPredicted RBP12.5□□□□□ -0.41
SYPL1-202ENST00000455385 HSPA6P17066 643 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 HOXA7P31268 230 aaPredicted RBP12.5□□□□□ -0.41
SYPL1-202ENST00000455385 KIF5BP33176 963 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 KIF23Q02241 960 aaPredicted RBP12.5□□□□□ -0.41
SYPL1-202ENST00000455385 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 BTNL9Q6UXG8 535 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 TMTC3Q6ZXV5 915 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 FAM43AQ8N2R8 423 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 SH2B1Q9NRF2 756 aaPredicted RBP12.5□□□□□ -0.41
SYPL1-202ENST00000455385 ISY1Q9ULR0 285 aaKnown RBP12.5□□□□□ -0.41
SYPL1-202ENST00000455385 AGTPBP1Q9UPW5 1226 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 RLFQ13129 1914 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 USP17L15C9J2P7 530 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 USP17L13C9JLJ4 530 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 USP17L11C9JVI0 530 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 USP17L18D6R9N7 530 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 USP17L22D6RA61 530 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 USP17L17D6RBQ6 530 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 USP17L19D6RCP7 530 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 USP17L20D6RJB6 530 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 VEGFBP49765 207 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 USP17L24Q0WX57 530 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 PPP2R5BQ15173 497 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 TANGO6Q9C0B7 1094 aa12.5□□□□□ -0.41
SYPL1-202ENST00000455385 VAT1LQ9HCJ6 419 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms