RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 PPP1R13BQ96KQ4 1090 aa12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 FBXO2Q9UK22 296 aaPredicted RBP12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 COL4A1P02462 1669 aa12.07□□□□□ -0.48
GTF3C2-206ENST00000454704 DDAH1O94760 285 aa12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 FGRP09769 529 aa12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 TOP1P11387 765 aaKnown RBP12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 MAP2K2P36507 400 aa12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 SARSP49591 514 aaKnown RBP12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 ETF1P62495 437 aaKnown RBP12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 MDM2Q00987 491 aaPredicted RBP12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 GABPB1Q06547 395 aaPredicted RBP12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 PPARAQ07869 468 aa12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 E4F1Q66K89 784 aaPredicted RBP12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 MICALL2Q8IY33 904 aa12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 FANCBQ8NB91 859 aa12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 SPATA20Q8TB22 786 aa12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 SMARCE1Q969G3 411 aa12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 ARMT1Q9H993 441 aa12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 AATFQ9NY61 560 aaKnown RBP eCLIP12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 PGAP2Q9UHJ9 254 aa12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 DENND2AQ9ULE3 1009 aa12.06□□□□□ -0.48
GTF3C2-206ENST00000454704 CCDC85CA6NKD9 419 aa12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 PRPF3O43395 683 aaKnown RBP12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 STX10O60499 249 aa12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 TRAPPC10P48553 1259 aa12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 MORC3Q14149 939 aa12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 SEC23AQ15436 765 aa12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 CFAP100Q494V2 611 aa12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 ZC3H15Q8WU90 426 aaKnown RBP12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 AIFM3Q96NN9 605 aa12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 ZMYND15Q9H091 742 aa12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 HSD3B7Q9H2F3 369 aa12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 LRP2BPQ9P2M1 347 aa12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 CNOT7Q9UIV1 285 aaKnown RBP12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 ZBTB12Q9Y330 459 aaPredicted RBP12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 PCDHA5Q9Y5H7 936 aa12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 CASP8AP2Q9UKL3 1982 aa12.05□□□□□ -0.48
GTF3C2-206ENST00000454704 MAGEB6P1A0A0J9YX57 407 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 BIN1O00499 593 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 KRT2P35908 639 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 TUBB4BP68371 445 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 CTDSPL2Q05D32 466 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 DMTNQ08495 405 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 TBX2Q13207 712 aaPredicted RBP12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 PNOCQ13519 176 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 ARID5BQ14865 1188 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 SF3B3Q15393 1217 aaKnown RBP12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 LONRF3Q496Y0 759 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 DLK2Q6UY11 383 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 TMC4Q7Z404 712 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 IQCA1Q86XH1 822 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 LCORLQ8N3X6 602 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 ZNF592Q92610 1267 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 CELF1Q92879 486 aaKnown RBP12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 HHIPL1Q96JK4 782 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 CTAGE1Q96RT6 745 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 NAA15Q9BXJ9 866 aaKnown RBP12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 DBNDD1Q9H9R9 158 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 GJB4Q9NTQ9 266 aa12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 DDX41Q9UJV9 622 aaKnown RBP12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 BAZ2AQ9UIF9 1905 aaKnown RBP12.04□□□□□ -0.48
GTF3C2-206ENST00000454704 TRIM75PA6NK02 468 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 USP27XA6NNY8 438 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 BTBD18B2RXH4 712 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 H7C1D1 291 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 PSMD14O00487 310 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 ORC4O43929 436 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 ZNF18P17022 549 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 CYP7A1P22680 504 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 PLCD1P51178 756 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 CHRNDQ07001 517 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 TUBB2AQ13885 445 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 CCDC178Q5BJE1 867 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 CAVIN4Q5BKX8 364 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 SAMD7Q7Z3H4 446 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 CATIPQ7Z7H3 387 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 RAB11FIP4Q86YS3 637 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 STK11IPQ8N1F8 1099 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 GSDMAQ96QA5 445 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 TUBB2BQ9BVA1 445 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 ARGLU1Q9NWB6 273 aaPredicted RBP12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 DNAI1Q9UI46 699 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 MAN1B1Q9UKM7 699 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 TNKSO95271 1327 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 RIMBP2O15034 1052 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 ATP8B1O43520 1251 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 CA12O43570 354 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 PPFIA3O75145 1194 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 KIF20AO95235 890 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 EGFRP00533 1210 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 RXRAP19793 462 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 TOB1P50616 345 aaPredicted RBP12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 GPSM2P81274 684 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 TBC1D10BQ4KMP7 808 aaPredicted RBP12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 SPECC1LQ69YQ0 1117 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 ANKRD18AQ8IVF6 992 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 TSC1Q92574 1164 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 ERCC4Q92889 916 aaPredicted RBP12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 CCDC51Q96ER9 411 aa12.03□□□□□ -0.48
GTF3C2-206ENST00000454704 ZIC5Q96T25 663 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms