RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 MSRAQ9UJ68 235 aa12.69□□□□□ -0.38
USP41-202ENST00000454608 TBX21Q9UL17 535 aa12.69□□□□□ -0.38
USP41-202ENST00000454608 SYNGAP1Q96PV0 1343 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 A0A1W2PRG0 241 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 ADAMTS4O75173 837 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 PBX2P40425 430 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 ZAP70P43403 619 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 SEPT2Q15019 361 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 AAK1Q2M2I8 961 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 TNNI3KQ59H18 835 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 TMEM240Q5SV17 173 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 ARHGAP45Q92619 1136 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 MMP19Q99542 508 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 DBNDD2Q9BQY9 259 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 MTIF3Q9H2K0 278 aaKnown RBP12.68□□□□□ -0.38
USP41-202ENST00000454608 PIH1D3Q9NQM4 214 aaKnown RBP12.68□□□□□ -0.38
USP41-202ENST00000454608 CXXC1Q9P0U4 656 aaPredicted RBP12.68□□□□□ -0.38
USP41-202ENST00000454608 HCN4Q9Y3Q4 1203 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 FPGT-TNNI3KV9GXZ4 949 aa12.68□□□□□ -0.38
USP41-202ENST00000454608 ELP1O95163 1332 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 FLOT1O75955 427 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 GNAI2P04899 355 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 ZNF865P0CJ78 1059 aaPredicted RBP12.67□□□□□ -0.38
USP41-202ENST00000454608 IGFBP4P22692 258 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 COPB2P35606 906 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 PLCD1P51178 756 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 GABPAQ06546 454 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 ADGRE1Q14246 886 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 KCTD2Q14681 263 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 CCDC85BQ15834 202 aaPredicted RBP12.67□□□□□ -0.38
USP41-202ENST00000454608 C16orf59Q7L2K0 433 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 MSL3Q8N5Y2 521 aaKnown RBP12.67□□□□□ -0.38
USP41-202ENST00000454608 MIGA1Q8NAN2 632 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 GLT1D1Q96MS3 346 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 SH2D4AQ9H788 454 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 SLC28A3Q9HAS3 691 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 CNPY2Q9Y2B0 182 aa12.67□□□□□ -0.38
USP41-202ENST00000454608 SYNRGQ9UMZ2 1314 aa12.66□□□□□ -0.38
USP41-202ENST00000454608 GRXCR1A8MXD5 290 aa12.66□□□□□ -0.38
USP41-202ENST00000454608 MPHOSPH10O00566 681 aaKnown RBP12.66□□□□□ -0.38
USP41-202ENST00000454608 IDH1O75874 414 aaKnown RBP12.66□□□□□ -0.38
USP41-202ENST00000454608 POLR3DP05423 398 aaPredicted RBP12.66□□□□□ -0.38
USP41-202ENST00000454608 ZNF792Q3KQV3 632 aa12.66□□□□□ -0.38
USP41-202ENST00000454608 TMEM179Q6ZVK1 233 aa12.66□□□□□ -0.38
USP41-202ENST00000454608 RIOX2Q8IUF8 465 aa12.66□□□□□ -0.38
USP41-202ENST00000454608 PCSK9Q8NBP7 692 aaKnown RBP12.66□□□□□ -0.38
USP41-202ENST00000454608 KLHDC9Q8NEP7 349 aa12.66□□□□□ -0.38
USP41-202ENST00000454608 ATG4CQ96DT6 458 aa12.66□□□□□ -0.38
USP41-202ENST00000454608 ARHGEF10LQ9HCE6 1279 aa12.66□□□□□ -0.38
USP41-202ENST00000454608 FAM184BQ9ULE4 1060 aa12.66□□□□□ -0.38
USP41-202ENST00000454608 PNMA6EA0A0J9YXQ4 647 aa12.65□□□□□ -0.38
USP41-202ENST00000454608 WDR46O15213 610 aaKnown RBP12.65□□□□□ -0.38
USP41-202ENST00000454608 TLR3O15455 904 aaKnown RBP12.65□□□□□ -0.38
USP41-202ENST00000454608 BMP1P13497 986 aa12.65□□□□□ -0.38
USP41-202ENST00000454608 CSF2RAP15509 400 aa12.65□□□□□ -0.38
USP41-202ENST00000454608 CST5P28325 142 aaPredicted RBP12.65□□□□□ -0.38
USP41-202ENST00000454608 CDK7P50613 346 aa12.65□□□□□ -0.38
USP41-202ENST00000454608 TMEM132BQ14DG7 1078 aa12.65□□□□□ -0.38
USP41-202ENST00000454608 KCNA10Q16322 511 aa12.65□□□□□ -0.38
USP41-202ENST00000454608 CCSAPQ6IQ19 270 aaPredicted RBP12.65□□□□□ -0.38
USP41-202ENST00000454608 ZNF365Q70YC5 407 aa12.65□□□□□ -0.38
USP41-202ENST00000454608 MAGEB6Q8N7X4 407 aa12.65□□□□□ -0.38
USP41-202ENST00000454608 HERVK_113Q902F9 699 aa12.65□□□□□ -0.38
USP41-202ENST00000454608 ADAMTS5Q9UNA0 930 aa12.65□□□□□ -0.38
USP41-202ENST00000454608 TMX2Q9Y320 296 aa12.65□□□□□ -0.38
USP41-202ENST00000454608 DUSP11O75319 330 aaKnown RBP12.64□□□□□ -0.39
USP41-202ENST00000454608 PGK2P07205 417 aa12.64□□□□□ -0.39
USP41-202ENST00000454608 TAL1P17542 331 aaPredicted RBP12.64□□□□□ -0.39
USP41-202ENST00000454608 OS9Q13438 667 aaPredicted RBP12.64□□□□□ -0.39
USP41-202ENST00000454608 TRMT2AQ8IZ69 625 aaKnown RBP12.64□□□□□ -0.39
USP41-202ENST00000454608 VCPKMTQ9H867 229 aa12.64□□□□□ -0.39
USP41-202ENST00000454608 SPC25Q9HBM1 224 aa12.64□□□□□ -0.39
USP41-202ENST00000454608 IL23AQ9NPF7 189 aa12.64□□□□□ -0.39
USP41-202ENST00000454608 SWAP70Q9UH65 585 aa12.64□□□□□ -0.39
USP41-202ENST00000454608 A0A0U1RQG5 324 aaPredicted RBP12.63□□□□□ -0.39
USP41-202ENST00000454608 ARVCFO00192 962 aa12.63□□□□□ -0.39
USP41-202ENST00000454608 APBB1O00213 710 aa12.63□□□□□ -0.39
USP41-202ENST00000454608 FGBP02675 491 aa12.63□□□□□ -0.39
USP41-202ENST00000454608 STAT3P40763 770 aa12.63□□□□□ -0.39
USP41-202ENST00000454608 KIAA1755Q5JYT7 1200 aa12.63□□□□□ -0.39
USP41-202ENST00000454608 CDCA7LQ96GN5 454 aa12.63□□□□□ -0.39
USP41-202ENST00000454608 RIOK1Q9BRS2 568 aaKnown RBP12.63□□□□□ -0.39
USP41-202ENST00000454608 NKX2-4Q9H2Z4 354 aa12.63□□□□□ -0.39
USP41-202ENST00000454608 MCM9Q9NXL9 1143 aa12.63□□□□□ -0.39
USP41-202ENST00000454608 MCM3APO60318 1980 aa12.62□□□□□ -0.39
USP41-202ENST00000454608 ERC2O15083 957 aa12.62□□□□□ -0.39
USP41-202ENST00000454608 ASGR1P07306 291 aa12.62□□□□□ -0.39
USP41-202ENST00000454608 ACRP10323 421 aa12.62□□□□□ -0.39
USP41-202ENST00000454608 MAMDC4Q6UXC1 1216 aa12.62□□□□□ -0.39
USP41-202ENST00000454608 FAM126BQ8IXS8 530 aa12.62□□□□□ -0.39
USP41-202ENST00000454608 SPICE1Q8N0Z3 855 aa12.62□□□□□ -0.39
USP41-202ENST00000454608 VTI1AQ96AJ9 217 aa12.62□□□□□ -0.39
USP41-202ENST00000454608 LENG1Q96BZ8 264 aaPredicted RBP12.62□□□□□ -0.39
USP41-202ENST00000454608 NECAB3Q96P71 396 aaPredicted RBP12.62□□□□□ -0.39
USP41-202ENST00000454608 LRFN3Q9BTN0 628 aa12.62□□□□□ -0.39
USP41-202ENST00000454608 CRNKL1Q9BZJ0 848 aaKnown RBP12.62□□□□□ -0.39
USP41-202ENST00000454608 PPP1R12CQ9BZL4 782 aa12.62□□□□□ -0.39
USP41-202ENST00000454608 DBNLQ9UJU6 430 aaKnown RBP12.62□□□□□ -0.39
USP41-202ENST00000454608 CHD9Q3L8U1 2897 aa12.61□□□□□ -0.39
USP41-202ENST00000454608 MAGEB6P1A0A0J9YX57 407 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms