RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 KLRC3Q07444 240 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 CCL14Q16627 93 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 PPP4R3BQ5MIZ7 849 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 MAP3K21Q5TCX8 1036 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 UBE2Q1Q7Z7E8 422 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 DPP9Q86TI2 863 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 NCAPG2Q86XI2 1143 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 PLEKHM2Q8IWE5 1019 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 NEDD1Q8NHV4 660 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 CEP95Q96GE4 821 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 FAM227BQ96M60 508 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 CRISPLD2Q9H0B8 497 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 OSBPL3Q9H4L5 887 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 FBXO28Q9NVF7 368 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 SLC5A4Q9NY91 659 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 MTMR4Q9NYA4 1195 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 PPP1R9AQ9ULJ8 1098 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 SYNPO2Q9UMS6 1093 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 PLIN4Q96Q06 1357 aa12.69□□□□□ -0.38
DDX39A-203ENST00000454233 RLFQ13129 1914 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 A0A0D9SFI3 127 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 NDUFB10O96000 172 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 HOXC6P09630 235 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 ADORA2AP29274 412 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 MFAP1P55081 439 aaKnown RBP12.68□□□□□ -0.38
DDX39A-203ENST00000454233 CTDSPL2Q05D32 466 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 CACNB2Q08289 660 aaPredicted RBP12.68□□□□□ -0.38
DDX39A-203ENST00000454233 NMIQ13287 307 aaPredicted RBP12.68□□□□□ -0.38
DDX39A-203ENST00000454233 ALX1Q15699 326 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 FAM47AQ5JRC9 791 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 VPS53Q5VIR6 699 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 ANKLE1Q8NAG6 615 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 MKL1Q969V6 931 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 SLF1Q9BQI6 1058 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 ADAMTS5Q9UNA0 930 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 CTDP1Q9Y5B0 961 aaPredicted RBP12.68□□□□□ -0.38
DDX39A-203ENST00000454233 A0A0G2JMZ2 1700 aa12.68□□□□□ -0.38
DDX39A-203ENST00000454233 TSPY2A6NKD2 308 aa12.67□□□□□ -0.38
DDX39A-203ENST00000454233 VWA5AO00534 786 aa12.67□□□□□ -0.38
DDX39A-203ENST00000454233 FOXP2O15409 715 aa12.67□□□□□ -0.38
DDX39A-203ENST00000454233 FCER1AP12319 257 aa12.67□□□□□ -0.38
DDX39A-203ENST00000454233 COPB2P35606 906 aa12.67□□□□□ -0.38
DDX39A-203ENST00000454233 TMEM132BQ14DG7 1078 aa12.67□□□□□ -0.38
DDX39A-203ENST00000454233 NECAB2Q7Z6G3 386 aa12.67□□□□□ -0.38
DDX39A-203ENST00000454233 ABRAQ8N0Z2 381 aa12.67□□□□□ -0.38
DDX39A-203ENST00000454233 PRPF38AQ8NAV1 312 aaKnown RBP12.67□□□□□ -0.38
DDX39A-203ENST00000454233 NPLOC4Q8TAT6 608 aa12.67□□□□□ -0.38
DDX39A-203ENST00000454233 NUP88Q99567 741 aaPredicted RBP12.67□□□□□ -0.38
DDX39A-203ENST00000454233 TOMM22Q9NS69 142 aa12.67□□□□□ -0.38
DDX39A-203ENST00000454233 ANAPC4Q9UJX5 808 aa12.67□□□□□ -0.38
DDX39A-203ENST00000454233 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDX39A-203ENST00000454233 CCDC171Q6TFL3 1326 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 HIP1O00291 1037 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 RANBP6O60518 1105 aaKnown RBP12.66□□□□□ -0.38
DDX39A-203ENST00000454233 HSPD1P10809 573 aaKnown RBP12.66□□□□□ -0.38
DDX39A-203ENST00000454233 SDSP20132 328 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 STAT3P40763 770 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 IRX6P78412 446 aaPredicted RBP12.66□□□□□ -0.38
DDX39A-203ENST00000454233 SLFN13Q68D06 897 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 RIOX2Q8IUF8 465 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 LRRC47Q8N1G4 583 aaKnown RBP12.66□□□□□ -0.38
DDX39A-203ENST00000454233 GMCL1P1Q8NEA9 526 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 PAWRQ96IZ0 340 aaKnown RBP12.66□□□□□ -0.38
DDX39A-203ENST00000454233 DIAPH3Q9NSV4 1193 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 FLRT1Q9NZU1 646 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 FEM1BQ9UK73 627 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 OGDHLQ9ULD0 1010 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 ISY1Q9ULR0 285 aaKnown RBP12.66□□□□□ -0.38
DDX39A-203ENST00000454233 NR2E3Q9Y5X4 410 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 MYH4Q9Y623 1939 aa12.66□□□□□ -0.38
DDX39A-203ENST00000454233 PARP14Q460N5 1801 aa12.65□□□□□ -0.38
DDX39A-203ENST00000454233 ZNF236Q9UL36 1845 aa12.65□□□□□ -0.38
DDX39A-203ENST00000454233 ORC4O43929 436 aa12.65□□□□□ -0.38
DDX39A-203ENST00000454233 ZBED4O75132 1171 aa12.65□□□□□ -0.38
DDX39A-203ENST00000454233 FGAP02671 866 aa12.65□□□□□ -0.38
DDX39A-203ENST00000454233 CNGA1P29973 690 aa12.65□□□□□ -0.38
DDX39A-203ENST00000454233 CCND3P30281 292 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-203ENST00000454233 KCTD2Q14681 263 aa12.65□□□□□ -0.38
DDX39A-203ENST00000454233 OLFML2BQ68BL8 750 aa12.65□□□□□ -0.38
DDX39A-203ENST00000454233 ZNF589Q86UQ0 364 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-203ENST00000454233 MMP19Q99542 508 aa12.65□□□□□ -0.38
DDX39A-203ENST00000454233 TEX13BQ9BXU2 312 aa12.65□□□□□ -0.38
DDX39A-203ENST00000454233 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
DDX39A-203ENST00000454233 ZNF214Q9UL59 606 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-203ENST00000454233 STX8Q9UNK0 236 aa12.65□□□□□ -0.38
DDX39A-203ENST00000454233 ZMYM6O95789 1325 aa12.64□□□□□ -0.39
DDX39A-203ENST00000454233 H0YGN5 161 aa12.64□□□□□ -0.39
DDX39A-203ENST00000454233 EVI5O60447 810 aa12.64□□□□□ -0.39
DDX39A-203ENST00000454233 MSCO60682 206 aa12.64□□□□□ -0.39
DDX39A-203ENST00000454233 COBLO75128 1261 aa12.64□□□□□ -0.39
DDX39A-203ENST00000454233 BMP3P12645 472 aa12.64□□□□□ -0.39
DDX39A-203ENST00000454233 CYP2C19P33261 490 aa12.64□□□□□ -0.39
DDX39A-203ENST00000454233 IKQ13123 557 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-203ENST00000454233 RRP12Q5JTH9 1297 aaKnown RBP12.64□□□□□ -0.39
DDX39A-203ENST00000454233 SNRNP48Q6IEG0 339 aaKnown RBP12.64□□□□□ -0.39
DDX39A-203ENST00000454233 REPS2Q8NFH8 660 aa12.64□□□□□ -0.39
DDX39A-203ENST00000454233 DIS3LQ8TF46 1054 aaKnown RBP12.64□□□□□ -0.39
DDX39A-203ENST00000454233 KIFC2Q96AC6 838 aa12.64□□□□□ -0.39
DDX39A-203ENST00000454233 INCENPQ9NQS7 918 aa12.64□□□□□ -0.39
DDX39A-203ENST00000454233 COL11A1P12107 1806 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms