RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 SPATC1LQ9H0A9 340 aa17.31■□□□□ 0.36
HSPG2-207ENST00000453796 RNF208Q9H0X6 261 aa17.31■□□□□ 0.36
HSPG2-207ENST00000453796 FBXO28Q9NVF7 368 aa17.31■□□□□ 0.36
HSPG2-207ENST00000453796 ORC4O43929 436 aa17.3■□□□□ 0.36
HSPG2-207ENST00000453796 TTLL1O95922 423 aa17.3■□□□□ 0.36
HSPG2-207ENST00000453796 NDUFB10O96000 172 aa17.3■□□□□ 0.36
HSPG2-207ENST00000453796 TSPY3P0CV98 308 aa17.3■□□□□ 0.36
HSPG2-207ENST00000453796 TSPY8P0CW00 308 aa17.3■□□□□ 0.36
HSPG2-207ENST00000453796 PTPREP23469 700 aa17.3■□□□□ 0.36
HSPG2-207ENST00000453796 TRIM32Q13049 653 aa17.3■□□□□ 0.36
HSPG2-207ENST00000453796 TTC22Q5TAA0 569 aa17.3■□□□□ 0.36
HSPG2-207ENST00000453796 PAK6Q9NQU5 681 aaPredicted RBP17.3■□□□□ 0.36
HSPG2-207ENST00000453796 PPP1R9AQ9ULJ8 1098 aa17.3■□□□□ 0.36
HSPG2-207ENST00000453796 FRMPD3Q5JV73 1810 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 SLC15A5A6NIM6 579 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 HIP1O00291 1037 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 NOVP48745 357 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 MFAP1P55081 439 aaKnown RBP17.29■□□□□ 0.36
HSPG2-207ENST00000453796 MAP2K5Q13163 448 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 GRB14Q14449 540 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 MAP3K21Q5TCX8 1036 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 CWC27Q6UX04 472 aaKnown RBP17.29■□□□□ 0.36
HSPG2-207ENST00000453796 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
HSPG2-207ENST00000453796 SHCBP1Q8NEM2 672 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 REPS2Q8NFH8 660 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 NKX2-3Q8TAU0 364 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 NUP88Q99567 741 aaPredicted RBP17.29■□□□□ 0.36
HSPG2-207ENST00000453796 APBA2Q99767 749 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 NBPF3Q9H094 633 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 IL17RBQ9NRM6 502 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 PLXNA1Q9UIW2 1896 aa17.29■□□□□ 0.36
HSPG2-207ENST00000453796 RGS2P41220 211 aa17.28■□□□□ 0.36
HSPG2-207ENST00000453796 TMEM132BQ14DG7 1078 aa17.28■□□□□ 0.36
HSPG2-207ENST00000453796 CCL14Q16627 93 aa17.28■□□□□ 0.36
HSPG2-207ENST00000453796 UBE2Q1Q7Z7E8 422 aa17.28■□□□□ 0.36
HSPG2-207ENST00000453796 GMCL1P1Q8NEA9 526 aa17.28■□□□□ 0.36
HSPG2-207ENST00000453796 IL25Q9H293 177 aa17.28■□□□□ 0.36
HSPG2-207ENST00000453796 DIAPH3Q9NSV4 1193 aa17.28■□□□□ 0.36
HSPG2-207ENST00000453796 TSPY2A6NKD2 308 aa17.27■□□□□ 0.36
HSPG2-207ENST00000453796 VWA5AO00534 786 aa17.27■□□□□ 0.36
HSPG2-207ENST00000453796 RAD21O60216 631 aa17.27■□□□□ 0.36
HSPG2-207ENST00000453796 SGPL1O95470 568 aa17.27■□□□□ 0.36
HSPG2-207ENST00000453796 HOXC6P09630 235 aa17.27■□□□□ 0.36
HSPG2-207ENST00000453796 ERCC3P19447 782 aa17.27■□□□□ 0.36
HSPG2-207ENST00000453796 TRMT44Q8IYL2 757 aaKnown RBP17.27■□□□□ 0.36
HSPG2-207ENST00000453796 LRRC47Q8N1G4 583 aaKnown RBP17.27■□□□□ 0.36
HSPG2-207ENST00000453796 U2AF1L4Q8WU68 220 aaKnown RBP17.27■□□□□ 0.36
HSPG2-207ENST00000453796 ZNF214Q9UL59 606 aaPredicted RBP17.27■□□□□ 0.36
HSPG2-207ENST00000453796 RPTORQ8N122 1335 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 STRNO43815 780 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 NMT2O60551 498 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 IGHA2P01877 340 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 HAND2P61296 217 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 WDR78Q5VTH9 848 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 NPLOC4Q8TAT6 608 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 STAG1Q8WVM7 1258 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 SLF1Q9BQI6 1058 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 DSCC1Q9BVC3 393 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 CRISPLD2Q9H0B8 497 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.26■□□□□ 0.35
HSPG2-207ENST00000453796 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
HSPG2-207ENST00000453796 FLRT1Q9NZU1 646 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 IVNS1ABPQ9Y6Y0 642 aa17.26■□□□□ 0.35
HSPG2-207ENST00000453796 RANBP6O60518 1105 aaKnown RBP17.25■□□□□ 0.35
HSPG2-207ENST00000453796 ZKSCAN1P17029 563 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-207ENST00000453796 CACNB2Q08289 660 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-207ENST00000453796 PLS1Q14651 629 aa17.25■□□□□ 0.35
HSPG2-207ENST00000453796 PPP4R3BQ5MIZ7 849 aa17.25■□□□□ 0.35
HSPG2-207ENST00000453796 AKNAD1Q5T1N1 836 aa17.25■□□□□ 0.35
HSPG2-207ENST00000453796 SAMD1Q6SPF0 538 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-207ENST00000453796 RIOX2Q8IUF8 465 aa17.25■□□□□ 0.35
HSPG2-207ENST00000453796 TBC1D10CQ8IV04 446 aa17.25■□□□□ 0.35
HSPG2-207ENST00000453796 PRPF38AQ8NAV1 312 aaKnown RBP17.25■□□□□ 0.35
HSPG2-207ENST00000453796 DEFB118Q96PH6 123 aa17.25■□□□□ 0.35
HSPG2-207ENST00000453796 MROH8Q9H579 483 aa17.25■□□□□ 0.35
HSPG2-207ENST00000453796 HMX1Q9NP08 348 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-207ENST00000453796 ALPK3Q96L96 1907 aa17.24■□□□□ 0.35
HSPG2-207ENST00000453796 SLC25A27O95847 323 aa17.24■□□□□ 0.35
HSPG2-207ENST00000453796 PCP11498 1178 aaKnown RBP17.24■□□□□ 0.35
HSPG2-207ENST00000453796 PRKAR2AP13861 404 aaKnown RBP17.24■□□□□ 0.35
HSPG2-207ENST00000453796 CAPN2P17655 700 aa17.24■□□□□ 0.35
HSPG2-207ENST00000453796 ADORA2AP29274 412 aa17.24■□□□□ 0.35
HSPG2-207ENST00000453796 SLFN13Q68D06 897 aa17.24■□□□□ 0.35
HSPG2-207ENST00000453796 NCAPG2Q86XI2 1143 aa17.24■□□□□ 0.35
HSPG2-207ENST00000453796 ABRAQ8N0Z2 381 aa17.24■□□□□ 0.35
HSPG2-207ENST00000453796 GMCL1Q96IK5 515 aa17.24■□□□□ 0.35
HSPG2-207ENST00000453796 TCP11L1Q9NUJ3 509 aa17.24■□□□□ 0.35
HSPG2-207ENST00000453796 FEM1BQ9UK73 627 aa17.24■□□□□ 0.35
HSPG2-207ENST00000453796 BMP3P12645 472 aa17.23■□□□□ 0.35
HSPG2-207ENST00000453796 STAT3P40763 770 aa17.23■□□□□ 0.35
HSPG2-207ENST00000453796 STX8Q9UNK0 236 aa17.23■□□□□ 0.35
HSPG2-207ENST00000453796 NEDD4P46934 1319 aa17.22■□□□□ 0.35
HSPG2-207ENST00000453796 RAD50Q92878 1312 aa17.22■□□□□ 0.35
HSPG2-207ENST00000453796 SMCHD1A6NHR9 2005 aa17.22■□□□□ 0.35
HSPG2-207ENST00000453796 ATP2A1O14983 1001 aa17.22■□□□□ 0.35
HSPG2-207ENST00000453796 COBLO75128 1261 aa17.22■□□□□ 0.35
HSPG2-207ENST00000453796 CHMLP26374 656 aa17.22■□□□□ 0.35
HSPG2-207ENST00000453796 RRP12Q5JTH9 1297 aaKnown RBP17.22■□□□□ 0.35
HSPG2-207ENST00000453796 MFSD6Q6ZSS7 791 aa17.22■□□□□ 0.35
HSPG2-207ENST00000453796 RASGRP2Q7LDG7 609 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms