RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 IGDCC4Q8TDY8 1250 aa15.53■□□□□ 0.08
UBE2D3-210ENST00000453744 CDK5RAP3Q96JB5 506 aa15.53■□□□□ 0.08
UBE2D3-210ENST00000453744 CYP2D7A0A087X1C5 515 aa15.52■□□□□ 0.08
UBE2D3-210ENST00000453744 CFAP58Q5T655 872 aa15.52■□□□□ 0.08
UBE2D3-210ENST00000453744 SPATA5Q8NB90 893 aa15.52■□□□□ 0.08
UBE2D3-210ENST00000453744 NOC4LQ9BVI4 516 aaKnown RBP15.52■□□□□ 0.08
UBE2D3-210ENST00000453744 C3P01024 1663 aa15.52■□□□□ 0.08
UBE2D3-210ENST00000453744 CIAO1O76071 339 aa15.52■□□□□ 0.08
UBE2D3-210ENST00000453744 FBXW10Q5XX13 1052 aa15.52■□□□□ 0.08
UBE2D3-210ENST00000453744 EFCAB13Q8IY85 973 aa15.52■□□□□ 0.08
UBE2D3-210ENST00000453744 RASGRP4Q8TDF6 673 aa15.52■□□□□ 0.08
UBE2D3-210ENST00000453744 SMCR8Q8TEV9 937 aaPredicted RBP15.52■□□□□ 0.08
UBE2D3-210ENST00000453744 STRBPQ96SI9 672 aaKnown RBP15.52■□□□□ 0.08
UBE2D3-210ENST00000453744 JAG2Q9Y219 1238 aa15.52■□□□□ 0.08
UBE2D3-210ENST00000453744 ACTN4O43707 911 aaKnown RBP15.52■□□□□ 0.07
UBE2D3-210ENST00000453744 EPS15P42566 896 aa15.52■□□□□ 0.07
UBE2D3-210ENST00000453744 TRIM14Q14142 442 aa15.52■□□□□ 0.07
UBE2D3-210ENST00000453744 EHD4Q9H223 541 aa15.52■□□□□ 0.07
UBE2D3-210ENST00000453744 FAM169AQ9Y6X4 670 aa15.52■□□□□ 0.07
UBE2D3-210ENST00000453744 A0A087WUV0 522 aaPredicted RBP15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 TSPY2A6NKD2 308 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 RAD21O60216 631 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 BMP15O95972 392 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 USP14P54578 494 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 PDCLQ13371 301 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 C8orf74Q6P047 294 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 C2CD5Q86YS7 1000 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 NKX2-3Q8TAU0 364 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 RPN1P04843 607 aaKnown RBP15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 VAV2P52735 878 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 LCORLQ8N3X6 602 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 FERMT2Q96AC1 680 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 KAT14Q9H8E8 782 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 VAT1LQ9HCJ6 419 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 EXOC1Q9NV70 894 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 SMARCAL1Q9NZC9 954 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 XRN1Q8IZH2 1706 aaKnown RBP15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 BUB1O43683 1085 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 TCP11X2Q5H9J9 407 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 HNRNPLLQ8WVV9 542 aaKnown RBP15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 PLEKHA8P1O95397 391 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 SLC20A2Q08357 652 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 UBE3CQ15386 1083 aa15.51■□□□□ 0.07
UBE2D3-210ENST00000453744 CPDO75976 1380 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 BCAMP50895 628 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 FAM47AQ5JRC9 791 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 KRT26Q7Z3Y9 468 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 MSANTD4Q8NCY6 345 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 IFIH1Q9BYX4 1025 aaKnown RBP15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 GOLGA6L7A0A1B0GV03 622 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 IGHMBP2P38935 993 aaKnown RBP15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 LIFRP42702 1097 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 PDE4DQ08499 809 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 CCDC91Q7Z6B0 441 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 COG1Q8WTW3 980 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 LRWD1Q9UFC0 647 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 ATP2B2Q01814 1243 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 DTHD1Q6ZMT9 781 aa15.5■□□□□ 0.07
UBE2D3-210ENST00000453744 MYO1AQ9UBC5 1043 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 DUSP10Q9Y6W6 482 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 JCADQ9P266 1359 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 PRCPP42785 496 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 NTRK3Q16288 839 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 HEATR3Q7Z4Q2 680 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 MYCBPQ99417 103 aaPredicted RBP15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 PPANQ9NQ55 473 aaKnown RBP15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 TCP11L1Q9NUJ3 509 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 PDE8BO95263 885 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 MAGEA1P43355 309 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 PPFIA1Q13136 1202 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 CT47A1Q5JQC4 288 aaPredicted RBP15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 MON2Q7Z3U7 1717 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 TAF4BQ92750 862 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 HPCAL4Q9UM19 191 aa15.49■□□□□ 0.07
UBE2D3-210ENST00000453744 A0A087X0B3 334 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 MAGEB6P1A0A0J9YX57 407 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 MAP2K2P36507 400 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 CORO7P57737 925 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 GBP6Q6ZN66 633 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 SH2D3CQ8N5H7 860 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 GPKOWQ92917 476 aaPredicted RBP eCLIP15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 NLRC4Q9NPP4 1024 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 AATFQ9NY61 560 aaKnown RBP eCLIP15.48■□□□□ 0.076e-12■■□□□ 12.2
UBE2D3-210ENST00000453744 RNF225M0QZC1 329 aaPredicted RBP15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 MOCS3O95396 460 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 NOP2P46087 812 aaKnown RBP15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 KLHL7Q8IXQ5 586 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 TTLL11Q8NHH1 800 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 UIMC1Q96RL1 719 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 RAB21Q9UL25 225 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 ESYT3A0FGR9 886 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 GTPBP6O43824 516 aaPredicted RBP15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 CASP7P55210 303 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 MDM2Q00987 491 aaPredicted RBP15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 SCLT1Q96NL6 688 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 TUBGCP2Q9BSJ2 902 aa15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 FAM217BQ9NTX9 383 aaPredicted RBP15.48■□□□□ 0.07
UBE2D3-210ENST00000453744 TMCO5BA8MYB1 307 aa15.47■□□□□ 0.07
UBE2D3-210ENST00000453744 PUM3Q15397 648 aaKnown RBP15.47■□□□□ 0.07
UBE2D3-210ENST00000453744 MMS22LQ6ZRQ5 1243 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms