RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 TMEM132BQ14DG7 1078 aa26.39■■□□□ 1.82
TNFRSF25-208ENST00000453341 TMED8Q6PL24 325 aaPredicted RBP26.39■■□□□ 1.82
TNFRSF25-208ENST00000453341 RNF180Q86T96 592 aa26.39■■□□□ 1.82
TNFRSF25-208ENST00000453341 TMEM39AQ9NV64 488 aa26.39■■□□□ 1.82
TNFRSF25-208ENST00000453341 MCM9Q9NXL9 1143 aa26.39■■□□□ 1.82
TNFRSF25-208ENST00000453341 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.38■■□□□ 1.81
TNFRSF25-208ENST00000453341 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.38■■□□□ 1.81
TNFRSF25-208ENST00000453341 TNFRSF10AO00220 468 aa26.38■■□□□ 1.81
TNFRSF25-208ENST00000453341 FAAP100Q0VG06 881 aa26.38■■□□□ 1.81
TNFRSF25-208ENST00000453341 TMEM179Q6ZVK1 233 aa26.38■■□□□ 1.81
TNFRSF25-208ENST00000453341 ZNF576Q9H609 170 aa26.38■■□□□ 1.81
TNFRSF25-208ENST00000453341 MYH8P13535 1937 aa26.37■■□□□ 1.81
TNFRSF25-208ENST00000453341 CHD7Q9P2D1 2997 aa26.37■■□□□ 1.81
TNFRSF25-208ENST00000453341 SAMD1Q6SPF0 538 aaPredicted RBP26.37■■□□□ 1.81
TNFRSF25-208ENST00000453341 TINF2Q9BSI4 451 aa26.37■■□□□ 1.81
TNFRSF25-208ENST00000453341 TMX2Q9Y320 296 aa26.37■■□□□ 1.81
TNFRSF25-208ENST00000453341 ADAMTS4O75173 837 aa26.36■■□□□ 1.81
TNFRSF25-208ENST00000453341 ZNF865P0CJ78 1059 aaPredicted RBP26.36■■□□□ 1.81
TNFRSF25-208ENST00000453341 ZNF792Q3KQV3 632 aa26.36■■□□□ 1.81
TNFRSF25-208ENST00000453341 ANKRD33Q7Z3H0 272 aa26.36■■□□□ 1.81
TNFRSF25-208ENST00000453341 SDR42E1Q8WUS8 393 aa26.36■■□□□ 1.81
TNFRSF25-208ENST00000453341 TIFAQ96CG3 184 aa26.36■■□□□ 1.81
TNFRSF25-208ENST00000453341 MMP19Q99542 508 aa26.36■■□□□ 1.81
TNFRSF25-208ENST00000453341 CRNKL1Q9BZJ0 848 aaKnown RBP26.36■■□□□ 1.81
TNFRSF25-208ENST00000453341 VCPKMTQ9H867 229 aa26.36■■□□□ 1.81
TNFRSF25-208ENST00000453341 RAPGEFL1Q9UHV5 662 aa26.36■■□□□ 1.81
TNFRSF25-208ENST00000453341 SLC25A27O95847 323 aa26.35■■□□□ 1.81
TNFRSF25-208ENST00000453341 AKR1B1P15121 316 aa26.35■■□□□ 1.81
TNFRSF25-208ENST00000453341 DYNLL2Q96FJ2 89 aa26.35■■□□□ 1.81
TNFRSF25-208ENST00000453341 TOX2Q96NM4 488 aa26.35■■□□□ 1.81
TNFRSF25-208ENST00000453341 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.35■■□□□ 1.81
TNFRSF25-208ENST00000453341 DCP1AQ9NPI6 582 aaPredicted RBP26.35■■□□□ 1.81
TNFRSF25-208ENST00000453341 PDE6AP16499 860 aa26.34■■□□□ 1.81
TNFRSF25-208ENST00000453341 ICA1Q05084 483 aa26.34■■□□□ 1.81
TNFRSF25-208ENST00000453341 ADAMTS5Q9UNA0 930 aa26.34■■□□□ 1.81
TNFRSF25-208ENST00000453341 AKR1A1P14550 325 aa26.33■■□□□ 1.81
TNFRSF25-208ENST00000453341 ARHGEF10LQ9HCE6 1279 aa26.33■■□□□ 1.81
TNFRSF25-208ENST00000453341 FBXO28Q9NVF7 368 aa26.33■■□□□ 1.81
TNFRSF25-208ENST00000453341 DIS3Q9Y2L1 958 aaKnown RBP26.33■■□□□ 1.81
TNFRSF25-208ENST00000453341 REV3LO60673 3130 aa26.32■■□□□ 1.8
TNFRSF25-208ENST00000453341 WDR46O15213 610 aaKnown RBP26.32■■□□□ 1.8
TNFRSF25-208ENST00000453341 ACLYP53396 1101 aa26.32■■□□□ 1.8
TNFRSF25-208ENST00000453341 SLC9C2Q5TAH2 1124 aa26.32■■□□□ 1.8
TNFRSF25-208ENST00000453341 RIOX2Q8IUF8 465 aa26.32■■□□□ 1.8
TNFRSF25-208ENST00000453341 LCORLQ8N3X6 602 aa26.32■■□□□ 1.8
TNFRSF25-208ENST00000453341 TSEN34Q9BSV6 310 aaKnown RBP26.32■■□□□ 1.8
TNFRSF25-208ENST00000453341 STARD7Q9NQZ5 370 aa26.32■■□□□ 1.8
TNFRSF25-208ENST00000453341 TBX21Q9UL17 535 aa26.32■■□□□ 1.8
TNFRSF25-208ENST00000453341 DCDC2CA8MYV0 355 aa26.31■■□□□ 1.8
TNFRSF25-208ENST00000453341 SMIM22K7EJ46 135 aa26.31■■□□□ 1.8
TNFRSF25-208ENST00000453341 TIMP1P01033 207 aa26.31■■□□□ 1.8
TNFRSF25-208ENST00000453341 PBX2P40425 430 aa26.31■■□□□ 1.8
TNFRSF25-208ENST00000453341 C16orf59Q7L2K0 433 aa26.31■■□□□ 1.8
TNFRSF25-208ENST00000453341 AACSQ86V21 672 aa26.31■■□□□ 1.8
TNFRSF25-208ENST00000453341 PPM1EQ8WY54 764 aa26.31■■□□□ 1.8
TNFRSF25-208ENST00000453341 SWAP70Q9UH65 585 aa26.31■■□□□ 1.8
TNFRSF25-208ENST00000453341 ZNF532Q9HCE3 1301 aa26.31■■□□□ 1.8
TNFRSF25-208ENST00000453341 SYNRGQ9UMZ2 1314 aa26.31■■□□□ 1.8
TNFRSF25-208ENST00000453341 BAZ2AQ9UIF9 1905 aaKnown RBP26.31■■□□□ 1.8
TNFRSF25-208ENST00000453341 TCRBV5S4A2TA0A5A2 114 aa26.3■■□□□ 1.8
TNFRSF25-208ENST00000453341 GRXCR1A8MXD5 290 aa26.3■■□□□ 1.8
TNFRSF25-208ENST00000453341 KCTD2Q14681 263 aa26.3■■□□□ 1.8
TNFRSF25-208ENST00000453341 ZKSCAN2Q63HK3 967 aa26.3■■□□□ 1.8
TNFRSF25-208ENST00000453341 CCSAPQ6IQ19 270 aaPredicted RBP26.3■■□□□ 1.8
TNFRSF25-208ENST00000453341 KLHDC9Q8NEP7 349 aa26.3■■□□□ 1.8
TNFRSF25-208ENST00000453341 REPS2Q8NFH8 660 aa26.3■■□□□ 1.8
TNFRSF25-208ENST00000453341 PBX4Q9BYU1 374 aa26.3■■□□□ 1.8
TNFRSF25-208ENST00000453341 SH2D4AQ9H788 454 aa26.3■■□□□ 1.8
TNFRSF25-208ENST00000453341 ZNF214Q9UL59 606 aaPredicted RBP26.3■■□□□ 1.8
TNFRSF25-208ENST00000453341 MYADML2A6NDP7 307 aa26.29■■□□□ 1.8
TNFRSF25-208ENST00000453341 STAT3P40763 770 aa26.29■■□□□ 1.8
TNFRSF25-208ENST00000453341 TMEM240Q5SV17 173 aa26.29■■□□□ 1.8
TNFRSF25-208ENST00000453341 RASIP1Q5U651 963 aa26.29■■□□□ 1.8
TNFRSF25-208ENST00000453341 PRDM12Q9H4Q4 367 aa26.29■■□□□ 1.8
TNFRSF25-208ENST00000453341 VWA5AO00534 786 aa26.28■■□□□ 1.8
TNFRSF25-208ENST00000453341 IRX5P78411 483 aaPredicted RBP26.28■■□□□ 1.8
TNFRSF25-208ENST00000453341 TTF1Q15361 905 aaPredicted RBP26.28■■□□□ 1.8
TNFRSF25-208ENST00000453341 KCNA10Q16322 511 aa26.28■■□□□ 1.8
TNFRSF25-208ENST00000453341 MFSD5Q6N075 450 aa26.28■■□□□ 1.8
TNFRSF25-208ENST00000453341 NUP133Q8WUM0 1156 aa26.28■■□□□ 1.8
TNFRSF25-208ENST00000453341 GAS2L1Q99501 681 aaPredicted RBP26.28■■□□□ 1.8
TNFRSF25-208ENST00000453341 CNPY2Q9Y2B0 182 aa26.28■■□□□ 1.8
TNFRSF25-208ENST00000453341 EXOC6BQ9Y2D4 811 aa26.28■■□□□ 1.8
TNFRSF25-208ENST00000453341 MOXD2PA6NHM9 499 aa26.27■■□□□ 1.8
TNFRSF25-208ENST00000453341 PRKAB2O43741 272 aa26.27■■□□□ 1.8
TNFRSF25-208ENST00000453341 ATXN2LQ8WWM7 1075 aaKnown RBP26.27■■□□□ 1.8
TNFRSF25-208ENST00000453341 ARMT1Q9H993 441 aa26.27■■□□□ 1.8
TNFRSF25-208ENST00000453341 PPP1R9AQ9ULJ8 1098 aa26.27■■□□□ 1.8
TNFRSF25-208ENST00000453341 SNAI1O95863 264 aaPredicted RBP26.26■■□□□ 1.79
TNFRSF25-208ENST00000453341 EEF2P13639 858 aaKnown RBP26.26■■□□□ 1.79
TNFRSF25-208ENST00000453341 ADGRE1Q14246 886 aa26.26■■□□□ 1.79
TNFRSF25-208ENST00000453341 AKNAD1Q5T1N1 836 aa26.26■■□□□ 1.79
TNFRSF25-208ENST00000453341 ASB2Q96Q27 587 aa26.26■■□□□ 1.79
TNFRSF25-208ENST00000453341 THEGQ9P2T0 379 aa26.26■■□□□ 1.79
TNFRSF25-208ENST00000453341 XIRP2A4UGR9 3374 aa26.26■■□□□ 1.79
TNFRSF25-208ENST00000453341 CYP2D7A0A087X1C5 515 aa26.25■■□□□ 1.79
TNFRSF25-208ENST00000453341 CSF2RAP15509 400 aa26.25■■□□□ 1.79
TNFRSF25-208ENST00000453341 CDK8P49336 464 aa26.25■■□□□ 1.79
TNFRSF25-208ENST00000453341 CDK7P50613 346 aa26.25■■□□□ 1.79
TNFRSF25-208ENST00000453341 PPIGQ13427 754 aaKnown RBP eCLIP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms