RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 CPVLQ9H3G5 476 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.95□□□□□ -1.3
SDC4P-201ENST00000453285 SYNPO2Q9UMS6 1093 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 MTMR7Q9Y216 660 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 CNPY2Q9Y2B0 182 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 TMX2Q9Y320 296 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 PPP2R3BQ9Y5P8 575 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 TRPM7Q96QT4 1865 aa6.95□□□□□ -1.3
SDC4P-201ENST00000453285 FRMPD2Q68DX3 1309 aaPredicted RBP6.95□□□□□ -1.3
SDC4P-201ENST00000453285 DDX11L8A8MPP1 907 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 ADAMTS3O15072 1205 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 CTNND1O60716 968 aaKnown RBP6.94□□□□□ -1.3
SDC4P-201ENST00000453285 MMP1P03956 469 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 ASNSP08243 561 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 SCG2P13521 617 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 U2AF2P26368 475 aaKnown RBP eCLIP6.94□□□□□ -1.3
SDC4P-201ENST00000453285 INPP5BP32019 993 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 EPHX2P34913 555 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 ECE1P42892 770 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 ATP2B2Q01814 1243 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 AKAP17AQ02040 695 aaKnown RBP6.94□□□□□ -1.3
SDC4P-201ENST00000453285 SLFN13Q68D06 897 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 TYW1BQ6NUM6 668 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 DLK2Q6UY11 383 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 USP50Q70EL3 339 aaPredicted RBP6.94□□□□□ -1.3
SDC4P-201ENST00000453285 USP48Q86UV5 1035 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 DCAF4Q8WV16 495 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 MTMR8Q96EF0 704 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 GMCL1Q96IK5 515 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 PHF20Q9BVI0 1012 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 ZNF341Q9BYN7 854 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 GLIS2Q9BZE0 524 aaPredicted RBP6.94□□□□□ -1.3
SDC4P-201ENST00000453285 GDPD2Q9HCC8 539 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 GPCPD1Q9NPB8 672 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 GINM1Q9NU53 330 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 VPS54Q9P1Q0 977 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 RBM27Q9P2N5 1060 aaKnown RBP6.94□□□□□ -1.3
SDC4P-201ENST00000453285 TFIP11Q9UBB9 837 aaKnown RBP6.94□□□□□ -1.3
SDC4P-201ENST00000453285 KCNJ14Q9UNX9 436 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 ATP6V1DQ9Y5K8 247 aa6.94□□□□□ -1.3
SDC4P-201ENST00000453285 BTBD18B2RXH4 712 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 GADD45BO75293 160 aaPredicted RBP6.93□□□□□ -1.3
SDC4P-201ENST00000453285 PRPF40AO75400 957 aaKnown RBP6.93□□□□□ -1.3
SDC4P-201ENST00000453285 USP2O75604 605 aaPredicted RBP6.93□□□□□ -1.3
SDC4P-201ENST00000453285 NDUFB10O96000 172 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 TRIM29Q14134 588 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 GPATCH4Q5T3I0 446 aaKnown RBP6.93□□□□□ -1.3
SDC4P-201ENST00000453285 MYSM1Q5VVJ2 828 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 DCAF15Q66K64 600 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 WWC2Q6AWC2 1192 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 BTNL9Q6UXG8 535 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 BRAPQ7Z569 592 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 CCDC84Q86UT8 332 aaPredicted RBP6.93□□□□□ -1.3
SDC4P-201ENST00000453285 ADGRF4Q8IZF3 695 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 OXER1Q8TDS5 423 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 ZC3H15Q8WU90 426 aaKnown RBP6.93□□□□□ -1.3
SDC4P-201ENST00000453285 PIBF1Q8WXW3 757 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 TNFRSF25Q93038 417 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 DCPSQ96C86 337 aaKnown RBP6.93□□□□□ -1.3
SDC4P-201ENST00000453285 KLRG1Q96E93 195 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 HOOK2Q96ED9 719 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 USP28Q96RU2 1077 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 PIGSQ96S52 555 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 ANP32EQ9BTT0 268 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 FOXP1Q9H334 677 aaPredicted RBP6.93□□□□□ -1.3
SDC4P-201ENST00000453285 TAF1DQ9H5J8 278 aaPredicted RBP6.93□□□□□ -1.3
SDC4P-201ENST00000453285 JMJD4Q9H9V9 463 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 ARHGEF10LQ9HCE6 1279 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 VAT1LQ9HCJ6 419 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 SH3GLB2Q9NR46 395 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 RCOR1Q9UKL0 485 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 FZD1Q9UP38 647 aa6.93□□□□□ -1.3
SDC4P-201ENST00000453285 ZNFX1Q9P2E3 1918 aaKnown RBP6.93□□□□□ -1.3
SDC4P-201ENST00000453285 LOC285556D6RIA3 1793 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 USP17L10C9JJH3 530 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 ADM5C9JUS6 153 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 GOLGA6L22H0YM25 854 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 M0R2N6 131 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 STXBP3O00186 592 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 TRAK2O60296 914 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 PPP1R11O60927 126 aaPredicted RBP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 CAPN15O75808 1086 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 BMP3P12645 472 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 PTMSP20962 102 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 SLC16A2P36021 539 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 SLC1A4P43007 532 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 TOB1P50616 345 aaPredicted RBP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 KRT85P78386 507 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 NR5A1Q13285 461 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 CCDC96Q2M329 555 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 SUPT20HL1Q3ZLR7 823 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 EARS2Q5JPH6 523 aaKnown RBP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 NOL9Q5SY16 702 aaKnown RBP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 ATL3Q6DD88 541 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 DIS3L2Q8IYB7 885 aaKnown RBP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 SCYL3Q8IZE3 742 aa6.92□□□□□ -1.3
SDC4P-201ENST00000453285 FAM177A1Q8N128 213 aaPredicted RBP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.92□□□□□ -1.3
SDC4P-201ENST00000453285 GPT2Q8TD30 523 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms