RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-209	ENST00000452660	PNLIP	P16233	465 aa		4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	PDE6B	P35913	854 aa		4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	YBX1	P67809	324 aa	Known RBP	4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	XPC	Q01831	940 aa	Predicted RBP	4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	TMEM62	Q0P6H9	643 aa		4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	NMI	Q13287	307 aa	Predicted RBP	4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	TMEM132E	Q6IEE7	984 aa		4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	BNC2	Q6ZN30	1099 aa	Predicted RBP	4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	SND1	Q7KZF4	910 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	REC114	Q7Z4M0	266 aa		4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	MARCH10	Q8NA82	808 aa	Predicted RBP	4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	MAP6	Q96JE9	813 aa		4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	C20orf173	Q96LM9	149 aa		4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	KCNK12	Q9HB15	430 aa		4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	RTEL1	Q9NZ71	1219 aa		4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	KCTD3	Q9Y597	815 aa		4.4	□□□□□ -1.71
LRCH3-209	ENST00000452660	ADAMTS20	P59510	1910 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	NOTO	A8MTQ0	251 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	CHURC1-FNTB	B4DL54	471 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	PSPN	O60542	156 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	PCBP3	P57721	371 aa	Known RBP	4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	CHMP4BP1	P59074	171 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	ERVFRD-1	P60508	538 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	CDCP2	Q5VXM1	449 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	FAM196A	Q6ZSG2	479 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	PHACTR4	Q8IZ21	702 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	USHBP1	Q8N6Y0	703 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	CXorf38	Q8TB03	319 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	ZCCHC4	Q9H5U6	513 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	TNFRSF10D	Q9UBN6	386 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	EBF1	Q9UH73	591 aa		4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	MBD1	Q9UIS9	605 aa	Predicted RBP	4.39	□□□□□ -1.71
LRCH3-209	ENST00000452660	SHISA3	A0PJX4	238 aa		4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	IRS4	O14654	1257 aa	Predicted RBP	4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	N4BP3	O15049	544 aa		4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	SORBS3	O60504	671 aa		4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	LRRN2	O75325	713 aa		4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	GBP1	P32455	592 aa		4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	BUD31	P41223	144 aa	Predicted RBP	4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	LAPTM5	Q13571	262 aa		4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	CWF19L2	Q2TBE0	894 aa	Known RBP	4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	NBPF9	Q3BBW0	867 aa		4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	ERICH6B	Q5W0A0	696 aa		4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	DACT3	Q96B18	629 aa	Predicted RBP	4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	TCTN2	Q96GX1	697 aa		4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	FCRL2	Q96LA5	508 aa	Predicted RBP	4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	GMIP	Q9P107	970 aa		4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	IRAK3	Q9Y616	596 aa		4.38	□□□□□ -1.71
LRCH3-209	ENST00000452660	WTIP	A6NIX2	430 aa	Predicted RBP	4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	SASH1	O94885	1247 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	SYN1	P17600	705 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	GART	P22102	1010 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	GBP2	P32456	591 aa	Predicted RBP	4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	SLC14A2	Q15849	920 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	SNAP47	Q5SQN1	464 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	GALNT18	Q6P9A2	607 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	DBX2	Q6ZNG2	339 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	FBXO33	Q7Z6M2	555 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	REXO1	Q8N1G1	1221 aa	Known RBP	4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	KIF2C	Q99661	725 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	EHMT1	Q9H9B1	1298 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	SIRT5	Q9NXA8	310 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	KLHL3	Q9UH77	587 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660	TCFL5	Q9UL49	500 aa		4.37	□□□□□ -1.71
LRCH3-209	ENST00000452660		A0A1W2PQ45	241 aa	Predicted RBP	4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660		A0A1W2PQY0	241 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	TMEM82	A0PJX8	343 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	SLC22A31	A6NKX4	558 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	SIGLEC6	O43699	453 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	FOXD2	O60548	495 aa	Predicted RBP	4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	GREM1	O60565	184 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	UBOX5	O94941	541 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	RPL10	P27635	214 aa	Known RBP	4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	SRSF3	P84103	164 aa	Known RBP	4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	RBM10	P98175	930 aa	Known RBP	4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	CBX2	Q14781	532 aa	Predicted RBP	4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	NFIX	Q14938	502 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	ADGRF1	Q5T601	910 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	ERMP1	Q7Z2K6	904 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	SP8	Q8IXZ3	490 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	BORCS6	Q96GS4	357 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	HHIPL1	Q96JK4	782 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	RNF19A	Q9NV58	838 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660	ZMYM5	Q9UJ78	669 aa		4.36	□□□□□ -1.71
LRCH3-209	ENST00000452660		A0A0G2JLL6	359 aa	Predicted RBP	4.35	□□□□□ -1.71
LRCH3-209	ENST00000452660	SSU72P8	A0A1W2PR75	194 aa		4.35	□□□□□ -1.71
LRCH3-209	ENST00000452660	FADS2P1	A8MWK0	482 aa		4.35	□□□□□ -1.71
LRCH3-209	ENST00000452660	DNAJA2	O60884	412 aa		4.35	□□□□□ -1.71
LRCH3-209	ENST00000452660	MPO	P05164	745 aa		4.35	□□□□□ -1.71
LRCH3-209	ENST00000452660	RAG1	P15918	1043 aa		4.35	□□□□□ -1.71
LRCH3-209	ENST00000452660	BMP7	P18075	431 aa		4.35	□□□□□ -1.71
LRCH3-209	ENST00000452660	BMP8B	P34820	402 aa		4.35	□□□□□ -1.71
LRCH3-209	ENST00000452660	ARL4A	P40617	200 aa		4.35	□□□□□ -1.71
LRCH3-209	ENST00000452660	LRRFIP1	Q32MZ4	808 aa	Known RBP	4.35	□□□□□ -1.71
LRCH3-209	ENST00000452660	BBS9	Q3SYG4	887 aa		4.35	□□□□□ -1.71
LRCH3-209	ENST00000452660	CEP128	Q6ZU80	1094 aa		4.35	□□□□□ -1.71
LRCH3-209	ENST00000452660	WAPL	Q7Z5K2	1190 aa		4.35	□□□□□ -1.71

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