RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 ASCC2Q9H1I8 757 aaPredicted RBP15.26■□□□□ 0.03
VPS33A-202ENST00000451053 ZCCHC17Q9NP64 241 aaKnown RBP15.26■□□□□ 0.03
VPS33A-202ENST00000451053 RNF186Q9NXI6 227 aa15.26■□□□□ 0.03
VPS33A-202ENST00000451053 TRPA1O75762 1119 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 ALDH1A1P00352 501 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 SNHG28P0DPA3 235 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 PDHBP11177 359 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 BMP3P12645 472 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 LIFRP42702 1097 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 SLC1A4P43007 532 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 IRX3P78415 501 aaPredicted RBP15.25■□□□□ 0.03
VPS33A-202ENST00000451053 PABPC4Q13310 644 aaKnown RBP eCLIP15.25■□□□□ 0.03
VPS33A-202ENST00000451053 CCDC96Q2M329 555 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 KCTD1Q719H9 257 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 DCAF4Q8WV16 495 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 MYL10Q9BUA6 226 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 R3HDMLQ9H3Y0 253 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 PDRG1Q9NUG6 133 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 FBXO28Q9NVF7 368 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 WBP1LQ9NX94 342 aa15.25■□□□□ 0.03
VPS33A-202ENST00000451053 ISY1Q9ULR0 285 aaKnown RBP15.25■□□□□ 0.03
VPS33A-202ENST00000451053 FRMPD2Q68DX3 1309 aaPredicted RBP15.24■□□□□ 0.03
VPS33A-202ENST00000451053 CCDC69A6NI79 296 aa15.24■□□□□ 0.03
VPS33A-202ENST00000451053 OSBPP22059 807 aa15.24■□□□□ 0.03
VPS33A-202ENST00000451053 FGD1P98174 961 aa15.24■□□□□ 0.03
VPS33A-202ENST00000451053 CRHR2Q13324 411 aa15.24■□□□□ 0.03
VPS33A-202ENST00000451053 TOB2Q14106 344 aaPredicted RBP15.24■□□□□ 0.03
VPS33A-202ENST00000451053 SGMS1Q86VZ5 419 aa15.24■□□□□ 0.03
VPS33A-202ENST00000451053 RAB11FIP4Q86YS3 637 aa15.24■□□□□ 0.03
VPS33A-202ENST00000451053 ZNF654Q8IZM8 581 aa15.24■□□□□ 0.03
VPS33A-202ENST00000451053 TMTC2Q8N394 836 aa15.24■□□□□ 0.03
VPS33A-202ENST00000451053 BRF1Q92994 677 aa15.24■□□□□ 0.03
VPS33A-202ENST00000451053 PARK7Q99497 189 aaKnown RBP15.24■□□□□ 0.03
VPS33A-202ENST00000451053 P2RX7Q99572 595 aaKnown RBP15.24■□□□□ 0.03
VPS33A-202ENST00000451053 AGXT2Q9BYV1 514 aa15.24■□□□□ 0.03
VPS33A-202ENST00000451053 GPCPD1Q9NPB8 672 aa15.24■□□□□ 0.03
VPS33A-202ENST00000451053 BRPF3Q9ULD4 1205 aa15.24■□□□□ 0.03
VPS33A-202ENST00000451053 RLFQ13129 1914 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 ADGRA2Q96PE1 1338 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 PARP14Q460N5 1801 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 SPDYE16A6NNV3 312 aaPredicted RBP15.23■□□□□ 0.03
VPS33A-202ENST00000451053 TMEM232C9JQI7 657 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 CA12O43570 354 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 FLOT1O75955 427 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 TBC1D8O95759 1140 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 GOLGA8HP0CJ92 632 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 ZNF543Q08ER8 600 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 APOBRQ0VD83 1088 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 TROAPQ12815 778 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 TTBK2Q6IQ55 1244 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 SAMD1Q6SPF0 538 aaPredicted RBP15.23■□□□□ 0.03
VPS33A-202ENST00000451053 CATIPQ7Z7H3 387 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 FBXL16Q8N461 479 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 PNMA3Q9UL41 463 aa15.23■□□□□ 0.03
VPS33A-202ENST00000451053 KLF18A0A0U1RQI7 1052 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 DDAH1O94760 285 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 RXRAP19793 462 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 DSG3P32926 999 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 NEK4P51957 841 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 HERVK_113P62684 666 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 COG2Q14746 738 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 GRM4Q14833 912 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 APOA5Q6Q788 366 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 POTEEQ6S8J3 1075 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 SMCR8Q8TEV9 937 aaPredicted RBP15.22■□□□□ 0.03
VPS33A-202ENST00000451053 NUP133Q8WUM0 1156 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 ATG4CQ96DT6 458 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 LARP6Q9BRS8 491 aaKnown RBP15.22■□□□□ 0.03
VPS33A-202ENST00000451053 BEGAINQ9BUH8 593 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 ZFYVE28Q9HCC9 887 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 SAGE1Q9NXZ1 904 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 FEM1BQ9UK73 627 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 SLC12A7Q9Y666 1083 aa15.22■□□□□ 0.03
VPS33A-202ENST00000451053 ST18O60284 1047 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 TLR2O60603 784 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 PEX10O60683 326 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 PARP1P09874 1014 aaKnown RBP15.21■□□□□ 0.03
VPS33A-202ENST00000451053 SLC16A2P36021 539 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 STAT2P52630 851 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 AK2P54819 239 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 ASPRV1Q53RT3 343 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 MICU3Q86XE3 530 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 STAG2Q8N3U4 1231 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 SLF1Q9BQI6 1058 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 CFHR5Q9BXR6 569 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 ALDH8A1Q9H2A2 487 aaPredicted RBP15.21■□□□□ 0.03
VPS33A-202ENST00000451053 CPVLQ9H3G5 476 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 CPA4Q9UI42 421 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 MAD2L2Q9UI95 211 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 PPP1R9AQ9ULJ8 1098 aa15.21■□□□□ 0.03
VPS33A-202ENST00000451053 A0A0G2JMZ2 1700 aa15.2■□□□□ 0.02
VPS33A-202ENST00000451053 PALM3A6NDB9 673 aaPredicted RBP15.2■□□□□ 0.02
VPS33A-202ENST00000451053 IKQ13123 557 aaPredicted RBP15.2■□□□□ 0.02
VPS33A-202ENST00000451053 BECN1Q14457 450 aa15.2■□□□□ 0.02
VPS33A-202ENST00000451053 GPATCH4Q5T3I0 446 aaKnown RBP15.2■□□□□ 0.02
VPS33A-202ENST00000451053 BTNL9Q6UXG8 535 aa15.2■□□□□ 0.02
VPS33A-202ENST00000451053 FAM160B2Q86V87 743 aa15.2■□□□□ 0.02
VPS33A-202ENST00000451053 CCDC144CPQ8IYA2 1237 aa15.2■□□□□ 0.02
VPS33A-202ENST00000451053 KIFC2Q96AC6 838 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms