RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 TIMP1P01033 207 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 ZNF865P0CJ78 1059 aaPredicted RBP7.97□□□□□ -1.13
PMS1-217ENST00000450931 ITGB8P26012 769 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 EPHB4P54760 987 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 GRIN2CQ14957 1233 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 MFSD5Q6N075 450 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 ZNF467Q7Z7K2 595 aaPredicted RBP7.97□□□□□ -1.13
PMS1-217ENST00000450931 SLC44A5Q8NCS7 719 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 KLHDC9Q8NEP7 349 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 FERMT2Q96AC1 680 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 EAF2Q96CJ1 260 aaPredicted RBP7.97□□□□□ -1.13
PMS1-217ENST00000450931 ATG4CQ96DT6 458 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 SEZ6LQ9BYH1 1024 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 THEGQ9P2T0 379 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 TBX21Q9UL17 535 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 CNPY2Q9Y2B0 182 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 CUL9Q8IWT3 2517 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 LAMA3Q16787 3333 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 MPHOSPH10O00566 681 aaKnown RBP7.97□□□□□ -1.13
PMS1-217ENST00000450931 COL9A1P20849 921 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 ACLYP53396 1101 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 ICA1Q05084 483 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 FAAP100Q0VG06 881 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 PLS1Q14651 629 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 TMEM132BQ14DG7 1078 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 RAB30Q15771 203 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 ANO1Q5XXA6 986 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 ZKSCAN2Q63HK3 967 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 STARD7Q9NQZ5 370 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 MCM9Q9NXL9 1143 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 TLR7Q9NYK1 1049 aaKnown RBP7.97□□□□□ -1.13
PMS1-217ENST00000450931 NKX3-2P78367 333 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 PRAMEF19Q5SWL8 479 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 MAMDC4Q6UXC1 1216 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 ATP8A2Q9NTI2 1148 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 FAM184BQ9ULE4 1060 aa7.97□□□□□ -1.13
PMS1-217ENST00000450931 SYNRGQ9UMZ2 1314 aa7.96□□□□□ -1.13
PMS1-217ENST00000450931 PQBP1O60828 265 aaKnown RBP7.96□□□□□ -1.13
PMS1-217ENST00000450931 MYCNP04198 464 aaPredicted RBP7.96□□□□□ -1.13
PMS1-217ENST00000450931 HSP90AB4PQ58FF6 505 aa7.96□□□□□ -1.13
PMS1-217ENST00000450931 CCSAPQ6IQ19 270 aaPredicted RBP7.96□□□□□ -1.13
PMS1-217ENST00000450931 AMOTL1Q8IY63 956 aa7.96□□□□□ -1.13
PMS1-217ENST00000450931 TMEM199Q8N511 208 aa7.96□□□□□ -1.13
PMS1-217ENST00000450931 TMEM57Q8N5G2 664 aa7.96□□□□□ -1.13
PMS1-217ENST00000450931 PCSK9Q8NBP7 692 aaKnown RBP7.96□□□□□ -1.13
PMS1-217ENST00000450931 CCDC8Q9H0W5 538 aaPredicted RBP7.96□□□□□ -1.13
PMS1-217ENST00000450931 UPF3AQ9H1J1 476 aaKnown RBP7.96□□□□□ -1.13
PMS1-217ENST00000450931 MTIF3Q9H2K0 278 aaKnown RBP7.96□□□□□ -1.13
PMS1-217ENST00000450931 GOPCQ9HD26 462 aa7.96□□□□□ -1.13
PMS1-217ENST00000450931 DCP1AQ9NPI6 582 aaPredicted RBP7.96□□□□□ -1.13
PMS1-217ENST00000450931 PPP1R9AQ9ULJ8 1098 aa7.96□□□□□ -1.13
PMS1-217ENST00000450931 ARIH1Q9Y4X5 557 aaPredicted RBP7.96□□□□□ -1.13
PMS1-217ENST00000450931 TLR3O15455 904 aaKnown RBP7.96□□□□□ -1.14
PMS1-217ENST00000450931 DUSP11O75319 330 aaKnown RBP7.96□□□□□ -1.14
PMS1-217ENST00000450931 PDE6AP16499 860 aa7.96□□□□□ -1.14
PMS1-217ENST00000450931 CDK7P50613 346 aa7.96□□□□□ -1.14
PMS1-217ENST00000450931 KIAA1755Q5JYT7 1200 aa7.96□□□□□ -1.14
PMS1-217ENST00000450931 USP38Q8NB14 1042 aa7.96□□□□□ -1.14
PMS1-217ENST00000450931 REPS2Q8NFH8 660 aa7.96□□□□□ -1.14
PMS1-217ENST00000450931 GLT1D1Q96MS3 346 aa7.96□□□□□ -1.14
PMS1-217ENST00000450931 ASB2Q96Q27 587 aa7.96□□□□□ -1.14
PMS1-217ENST00000450931 ANTXR1Q9H6X2 564 aa7.96□□□□□ -1.14
PMS1-217ENST00000450931 ZNF214Q9UL59 606 aaPredicted RBP7.96□□□□□ -1.14
PMS1-217ENST00000450931 ATP2A1O14983 1001 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 PGK1P00558 417 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 PLA2G5P39877 138 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 STAT3P40763 770 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 MRPS5P82675 430 aaKnown RBP7.95□□□□□ -1.14
PMS1-217ENST00000450931 SIAH1Q8IUQ4 282 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.95□□□□□ -1.142e-8■□□□□ 9.3
PMS1-217ENST00000450931 KANSL2Q9H9L4 492 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 SPC25Q9HBM1 224 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 LRRC37A2A6NM11 1700 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 DNAJC25-GNG10A0A024R161 153 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 A0A0U1RQG5 324 aaPredicted RBP7.95□□□□□ -1.14
PMS1-217ENST00000450931 TCRBV5S4A2TA0A5A2 114 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 VWA5AO00534 786 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 TMEM240Q5SV17 173 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 SLC9C2Q5TAH2 1124 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 C16orf86Q6ZW13 317 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 TSPYL2Q9H2G4 693 aaPredicted RBP7.95□□□□□ -1.14
PMS1-217ENST00000450931 SYNPO2Q9UMS6 1093 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 ZBED9Q6R2W3 1325 aa7.95□□□□□ -1.14
PMS1-217ENST00000450931 BCAR3O75815 825 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 AKR1B1P15121 316 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 GJA9P57773 515 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 HERVK_113Q902F9 699 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 FRAT1Q92837 279 aaPredicted RBP7.94□□□□□ -1.14
PMS1-217ENST00000450931 TEX13BQ9BXU2 312 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 PBX4Q9BYU1 374 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 MSRAQ9UJ68 235 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 ZNF532Q9HCE3 1301 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 MYH7P12883 1935 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 PGK2P07205 417 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 C12orf60Q5U649 245 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 CCDC129Q6ZRS4 1044 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 AACSQ86V21 672 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 LCORLQ8N3X6 602 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 DDRGK1Q96HY6 314 aa7.94□□□□□ -1.14
PMS1-217ENST00000450931 FBXO40Q9UH90 709 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms