RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 DUX4L3P0CJ86 424 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 DUX4L4P0CJ87 422 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 DUX4L5P0CJ88 424 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 DUX4L6P0CJ89 424 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 DUX4L7P0CJ90 424 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 AGBL2Q5U5Z8 902 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 POTEBQ6S5H4 581 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 TRIM74Q86UV6 250 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 TRIM73Q86UV7 250 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 RETREG2Q8NC44 543 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 ZBTB9Q96C00 473 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 KLHL29Q96CT2 875 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 CSRNP2Q9H175 543 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 CARD9Q9H257 536 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 ZSWIM4Q9H7M6 989 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 CD209Q9NNX6 404 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 DDX21Q9NR30 783 aaKnown RBP eCLIP2.43□□□□□ -2.02
USP53-202ENST00000450251 C6orf203Q9P0P8 240 aaPredicted RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 DUX4Q9UBX2 424 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 DIS3Q9Y2L1 958 aaKnown RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 TTC21BQ7Z4L5 1316 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 PITPNM2Q9BZ72 1349 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 A0A1W2PQ27 194 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 A0A1W2PQ64 194 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 A0A1W2PQD8 194 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 GSTTP1A0A1W2PQM5 241 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 E9PMD0 336 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 HMGB3O15347 200 aaKnown RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 MGEA5O60502 916 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 FCHSD2O94868 740 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 TRIM27P14373 513 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 PAX7P23759 505 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 HPDP32754 393 aaPredicted RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 MAN1A1P33908 653 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 CTNNA1P35221 906 aaKnown RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 STAT2P52630 851 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 STRN3Q13033 797 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 NR1H3Q13133 447 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 CALCOCO2Q13137 446 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 PDE1CQ14123 709 aaPredicted RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 UBE4AQ14139 1066 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 SPIDRQ14159 915 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 KARSQ15046 597 aaKnown RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 RRS1Q15050 365 aaKnown RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 CCDC153Q494R4 210 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 PRPF40BQ6NWY9 871 aaKnown RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 POTEHQ6S545 545 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 KDM7AQ6ZMT4 941 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 NYAP1Q6ZVC0 841 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 OTUD6AQ7L8S5 288 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 HS2ST1Q7LGA3 356 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 ANKRD23Q86SG2 305 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 ZNF554Q86TJ5 538 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 FAM212AQ96EL1 285 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 TSPAN18Q96SJ8 248 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 FAM129AQ9BZQ8 928 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 LZTFL1Q9NQ48 299 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 TYW1Q9NV66 732 aaKnown RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 AATFQ9NY61 560 aaKnown RBP eCLIP2.43□□□□□ -2.02
USP53-202ENST00000450251 SUCLA2Q9P2R7 463 aaPredicted RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 SAP30BPQ9UHR5 308 aaKnown RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 RPL26L1Q9UNX3 145 aaKnown RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 COLQQ9Y215 455 aaPredicted RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 ARIH1Q9Y4X5 557 aaPredicted RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 CDK12Q9NYV4 1490 aaPredicted RBP2.43□□□□□ -2.02
USP53-202ENST00000450251 SYNRGQ9UMZ2 1314 aa2.43□□□□□ -2.02
USP53-202ENST00000450251 PPIP5K1Q6PFW1 1433 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 SYCE1LA8MT33 242 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 P4HA2O15460 535 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 RGS16O15492 202 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 PFKFB2O60825 505 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 CBFA2T3O75081 653 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 STK10O94804 968 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 SEC24BO95487 1268 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 GAS8O95995 478 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 FESP07332 822 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 PARP1P09874 1014 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 FAM200BP0CF97 657 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 GNAT1P11488 350 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ATICP31939 592 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 KRT6CP48668 564 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 HDAC4P56524 1084 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 PHEXP78562 749 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ATP8B2P98198 1209 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 IL9RQ01113 521 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 GNPTABQ3T906 1256 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 TTC39AQ5SRH9 613 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 TCERG1LQ5VWI1 586 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 HIBCHQ6NVY1 386 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 CYB5D1Q6P9G0 228 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ARHGEF18Q6ZSZ5 1173 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 WDR75Q8IWA0 830 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 ANKRD44Q8N8A2 993 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 IGSF22Q8N9C0 903 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 DRAXINQ8NBI3 349 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 SPDYE1Q8NFV5 336 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 SNX29Q8TEQ0 813 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ZFAND2BQ8WV99 257 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 PPP2R3CQ969Q6 453 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms