RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 TMEM179Q6ZVK1 233 aa16.63■□□□□ 0.25
CPSF7-207ENST00000449811 SPICE1Q8N0Z3 855 aa16.63■□□□□ 0.25
CPSF7-207ENST00000449811 NUP133Q8WUM0 1156 aa16.63■□□□□ 0.25
CPSF7-207ENST00000449811 LENG1Q96BZ8 264 aaPredicted RBP16.63■□□□□ 0.25
CPSF7-207ENST00000449811 RIOK1Q9BRS2 568 aaKnown RBP16.63■□□□□ 0.25
CPSF7-207ENST00000449811 TSEN34Q9BSV6 310 aaKnown RBP16.63■□□□□ 0.25
CPSF7-207ENST00000449811 PBX4Q9BYU1 374 aa16.63■□□□□ 0.25
CPSF7-207ENST00000449811 CCDC8Q9H0W5 538 aaPredicted RBP16.63■□□□□ 0.25
CPSF7-207ENST00000449811 PRDM12Q9H4Q4 367 aa16.63■□□□□ 0.25
CPSF7-207ENST00000449811 ANTXR1Q9H6X2 564 aa16.63■□□□□ 0.25
CPSF7-207ENST00000449811 SMCHD1A6NHR9 2005 aa16.62■□□□□ 0.25
CPSF7-207ENST00000449811 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
CPSF7-207ENST00000449811 ZNF865P0CJ78 1059 aaPredicted RBP16.62■□□□□ 0.25
CPSF7-207ENST00000449811 PBX2P40425 430 aa16.62■□□□□ 0.25
CPSF7-207ENST00000449811 ACLYP53396 1101 aa16.62■□□□□ 0.25
CPSF7-207ENST00000449811 EVX2Q03828 476 aa16.62■□□□□ 0.25
CPSF7-207ENST00000449811 CCDC174Q6PII3 467 aa16.62■□□□□ 0.25
CPSF7-207ENST00000449811 UHRF1Q96T88 793 aaPredicted RBP16.62■□□□□ 0.25
CPSF7-207ENST00000449811 TBX21Q9UL17 535 aa16.62■□□□□ 0.25
CPSF7-207ENST00000449811 DIS3Q9Y2L1 958 aaKnown RBP16.62■□□□□ 0.25
CPSF7-207ENST00000449811 MRPS5P82675 430 aaKnown RBP16.61■□□□□ 0.25
CPSF7-207ENST00000449811 PPIGQ13427 754 aaKnown RBP eCLIP16.61■□□□□ 0.259e-8■■■□□ 16.8
CPSF7-207ENST00000449811 KCTD2Q14681 263 aa16.61■□□□□ 0.25
CPSF7-207ENST00000449811 ZNF792Q3KQV3 632 aa16.61■□□□□ 0.25
CPSF7-207ENST00000449811 MFSD5Q6N075 450 aa16.61■□□□□ 0.25
CPSF7-207ENST00000449811 IL27Q8NEV9 243 aa16.61■□□□□ 0.25
CPSF7-207ENST00000449811 SSH3Q8TE77 659 aa16.61■□□□□ 0.25
CPSF7-207ENST00000449811 FAM122AQ96E09 287 aa16.61■□□□□ 0.25
CPSF7-207ENST00000449811 SH2D4AQ9H788 454 aa16.61■□□□□ 0.25
CPSF7-207ENST00000449811 VCPKMTQ9H867 229 aa16.61■□□□□ 0.25
CPSF7-207ENST00000449811 ARHGEF10LQ9HCE6 1279 aa16.61■□□□□ 0.25
CPSF7-207ENST00000449811 MCM9Q9NXL9 1143 aa16.61■□□□□ 0.25
CPSF7-207ENST00000449811 TNNQ9UQP3 1299 aa16.61■□□□□ 0.25
CPSF7-207ENST00000449811 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
CPSF7-207ENST00000449811 MAGEB6P1A0A0J9YX57 407 aa16.6■□□□□ 0.25
CPSF7-207ENST00000449811 MOXD2PA6NHM9 499 aa16.6■□□□□ 0.25
CPSF7-207ENST00000449811 GRXCR1A8MXD5 290 aa16.6■□□□□ 0.25
CPSF7-207ENST00000449811 WDR46O15213 610 aaKnown RBP16.6■□□□□ 0.25
CPSF7-207ENST00000449811 TMEM240Q5SV17 173 aa16.6■□□□□ 0.25
CPSF7-207ENST00000449811 RIOX2Q8IUF8 465 aa16.6■□□□□ 0.25
CPSF7-207ENST00000449811 CLEC10AQ8IUN9 316 aa16.6■□□□□ 0.25
CPSF7-207ENST00000449811 CLUAP1Q96AJ1 413 aa16.6■□□□□ 0.25
CPSF7-207ENST00000449811 EAF2Q96CJ1 260 aaPredicted RBP16.6■□□□□ 0.25
CPSF7-207ENST00000449811 CRNKL1Q9BZJ0 848 aaKnown RBP16.6■□□□□ 0.25
CPSF7-207ENST00000449811 TMX2Q9Y320 296 aa16.6■□□□□ 0.25
CPSF7-207ENST00000449811 MROH7Q68CQ1 1323 aa16.6■□□□□ 0.25
CPSF7-207ENST00000449811 SYNRGQ9UMZ2 1314 aa16.6■□□□□ 0.25
CPSF7-207ENST00000449811 NAV1Q8NEY1 1877 aa16.6■□□□□ 0.25
CPSF7-207ENST00000449811 BCAR3O75815 825 aa16.59■□□□□ 0.25
CPSF7-207ENST00000449811 ATP8B2P98198 1209 aa16.59■□□□□ 0.25
CPSF7-207ENST00000449811 ICA1Q05084 483 aa16.59■□□□□ 0.25
CPSF7-207ENST00000449811 ADGRE1Q14246 886 aa16.59■□□□□ 0.25
CPSF7-207ENST00000449811 CCDC85BQ15834 202 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-207ENST00000449811 RASIP1Q5U651 963 aa16.59■□□□□ 0.25
CPSF7-207ENST00000449811 C16orf59Q7L2K0 433 aa16.59■□□□□ 0.25
CPSF7-207ENST00000449811 SIAH1Q8IUQ4 282 aa16.59■□□□□ 0.25
CPSF7-207ENST00000449811 FRAT1Q92837 279 aaPredicted RBP16.59■□□□□ 0.25
CPSF7-207ENST00000449811 ADAMTS5Q9UNA0 930 aa16.59■□□□□ 0.25
CPSF7-207ENST00000449811 IGFBP4P22692 258 aa16.58■□□□□ 0.24
CPSF7-207ENST00000449811 KCNA10Q16322 511 aa16.58■□□□□ 0.24
CPSF7-207ENST00000449811 CCSAPQ6IQ19 270 aaPredicted RBP16.58■□□□□ 0.24
CPSF7-207ENST00000449811 TMEM199Q8N511 208 aa16.58■□□□□ 0.24
CPSF7-207ENST00000449811 KLHDC9Q8NEP7 349 aa16.58■□□□□ 0.24
CPSF7-207ENST00000449811 GLT1D1Q96MS3 346 aa16.58■□□□□ 0.24
CPSF7-207ENST00000449811 SWAP70Q9UH65 585 aa16.58■□□□□ 0.24
CPSF7-207ENST00000449811 MSRAQ9UJ68 235 aa16.58■□□□□ 0.24
CPSF7-207ENST00000449811 NOP58Q9Y2X3 529 aaKnown RBP16.58■□□□□ 0.24
CPSF7-207ENST00000449811 ZNFX1Q9P2E3 1918 aaKnown RBP16.58■□□□□ 0.24
CPSF7-207ENST00000449811 XIRP2A4UGR9 3374 aa16.58■□□□□ 0.24
CPSF7-207ENST00000449811 ELP1O95163 1332 aa16.57■□□□□ 0.24
CPSF7-207ENST00000449811 ACRP10323 421 aa16.57■□□□□ 0.24
CPSF7-207ENST00000449811 CYP2D6P10635 497 aa16.57■□□□□ 0.24
CPSF7-207ENST00000449811 AKR1B1P15121 316 aa16.57■□□□□ 0.24
CPSF7-207ENST00000449811 CSF2RAP15509 400 aa16.57■□□□□ 0.24
CPSF7-207ENST00000449811 COPB2P35606 906 aa16.57■□□□□ 0.24
CPSF7-207ENST00000449811 STAT3P40763 770 aa16.57■□□□□ 0.24
CPSF7-207ENST00000449811 PSRC1Q6PGN9 363 aaPredicted RBP16.57■□□□□ 0.24
CPSF7-207ENST00000449811 ZNF365Q70YC5 407 aa16.57■□□□□ 0.24
CPSF7-207ENST00000449811 MSL3Q8N5Y2 521 aaKnown RBP16.57■□□□□ 0.24
CPSF7-207ENST00000449811 SDR42E1Q8WUS8 393 aa16.57■□□□□ 0.24
CPSF7-207ENST00000449811 DYNLL2Q96FJ2 89 aa16.57■□□□□ 0.24
CPSF7-207ENST00000449811 DCP1AQ9NPI6 582 aaPredicted RBP16.57■□□□□ 0.24
CPSF7-207ENST00000449811 FBXO28Q9NVF7 368 aa16.57■□□□□ 0.24
CPSF7-207ENST00000449811 FAM184BQ9ULE4 1060 aa16.57■□□□□ 0.24
CPSF7-207ENST00000449811 PLXNA1Q9UIW2 1896 aa16.56■□□□□ 0.24
CPSF7-207ENST00000449811 CHD9Q3L8U1 2897 aa16.56■□□□□ 0.24
CPSF7-207ENST00000449811 MYADML2A6NDP7 307 aa16.56■□□□□ 0.24
CPSF7-207ENST00000449811 APBB1O00213 710 aa16.56■□□□□ 0.24
CPSF7-207ENST00000449811 VWA5AO00534 786 aa16.56■□□□□ 0.24
CPSF7-207ENST00000449811 RAB30Q15771 203 aa16.56■□□□□ 0.24
CPSF7-207ENST00000449811 SLC9C2Q5TAH2 1124 aa16.56■□□□□ 0.24
CPSF7-207ENST00000449811 TMEM57Q8N5G2 664 aa16.56■□□□□ 0.24
CPSF7-207ENST00000449811 PPP1R12CQ9BZL4 782 aa16.56■□□□□ 0.24
CPSF7-207ENST00000449811 C1orf115Q9H7X2 142 aa16.56■□□□□ 0.24
CPSF7-207ENST00000449811 ZHX1Q9UKY1 873 aaPredicted RBP16.56■□□□□ 0.24
CPSF7-207ENST00000449811 PARP14Q460N5 1801 aa16.56■□□□□ 0.24
CPSF7-207ENST00000449811 SYNGAP1Q96PV0 1343 aa16.55■□□□□ 0.24
CPSF7-207ENST00000449811 COL11A1P12107 1806 aaPredicted RBP16.55■□□□□ 0.24
CPSF7-207ENST00000449811 ZNF316A6NFI3 1004 aaPredicted RBP16.55■□□□□ 0.24
CPSF7-207ENST00000449811 DUSP11O75319 330 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms