RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 FAM196BA6NMK8 535 aa18.43■□□□□ 0.54
AP000253.1-201ENST00000449339 NLRP12P59046 1061 aa18.43■□□□□ 0.54
AP000253.1-201ENST00000449339 GRIN1Q05586 938 aa18.43■□□□□ 0.54
AP000253.1-201ENST00000449339 LONRF3Q496Y0 759 aa18.43■□□□□ 0.54
AP000253.1-201ENST00000449339 USP17L2Q6R6M4 530 aa18.43■□□□□ 0.54
AP000253.1-201ENST00000449339 RTKN2Q8IZC4 609 aa18.43■□□□□ 0.54
AP000253.1-201ENST00000449339 SRPRBQ9Y5M8 271 aaKnown RBP18.43■□□□□ 0.54
AP000253.1-201ENST00000449339 SIPA1L1O43166 1804 aa18.43■□□□□ 0.54
AP000253.1-201ENST00000449339 PALM3A6NDB9 673 aaPredicted RBP18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 DDTLA6NHG4 134 aaPredicted RBP18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 TRIM75PA6NK02 468 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 HDLBPQ00341 1268 aaKnown RBP18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 KRBA2Q6ZNG9 492 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 LARGE2Q8N3Y3 721 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 ZNF579Q8NAF0 562 aaKnown RBP18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 BPIFA3Q9BQP9 254 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 TDRD3Q9H7E2 651 aaKnown RBP18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 TUBE1Q9UJT0 475 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 SERPINA10Q9UK55 444 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 HLA-DOAP06340 250 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 TOP1P11387 765 aaKnown RBP18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 SH3BP5LQ7L8J4 393 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 LRRC47Q8N1G4 583 aaKnown RBP18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 CNNM3Q8NE01 707 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 TNFRSF25Q93038 417 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 KCNF1Q9H3M0 494 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 DNAJC18Q9H819 358 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 MTMR4Q9NYA4 1195 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 FAM13BQ9NYF5 915 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 PSME4Q14997 1843 aa18.42■□□□□ 0.54
AP000253.1-201ENST00000449339 USP17L5A8MUK1 530 aa18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 WNT7AO00755 349 aa18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 PNOCQ13519 176 aa18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 CFAP100Q494V2 611 aa18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 PSMD1Q99460 953 aa18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 PLIN4Q96Q06 1357 aa18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 KLRF2D3W0D1 207 aa18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 NOVP48745 357 aa18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 GNAQP50148 359 aa18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 NLRP5P59047 1200 aa18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 SHROOM1Q2M3G4 852 aaPredicted RBP18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 TYW1BQ6NUM6 668 aa18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 METTL16Q86W50 562 aaKnown RBP18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 PRMT6Q96LA8 375 aaPredicted RBP18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 CLIP2Q9UDT6 1046 aa18.41■□□□□ 0.54
AP000253.1-201ENST00000449339 IGKV6D-41A0A0C4DH26 115 aa18.4■□□□□ 0.54
AP000253.1-201ENST00000449339 PSMD14O00487 310 aa18.4■□□□□ 0.54
AP000253.1-201ENST00000449339 PARP1P09874 1014 aaKnown RBP18.4■□□□□ 0.54
AP000253.1-201ENST00000449339 PTGS1P23219 599 aa18.4■□□□□ 0.54
AP000253.1-201ENST00000449339 CDC25BP30305 580 aa18.4■□□□□ 0.54
AP000253.1-201ENST00000449339 ZSCAN29Q8IWY8 852 aaPredicted RBP18.4■□□□□ 0.54
AP000253.1-201ENST00000449339 MRFAP1L1Q96HT8 127 aa18.4■□□□□ 0.54
AP000253.1-201ENST00000449339 IDI2Q9BXS1 227 aa18.4■□□□□ 0.54
AP000253.1-201ENST00000449339 SWAP70Q9UH65 585 aa18.4■□□□□ 0.54
AP000253.1-201ENST00000449339 MORC2Q9Y6X9 1032 aaPredicted RBP18.4■□□□□ 0.54
AP000253.1-201ENST00000449339 MPHOSPH10O00566 681 aaKnown RBP18.39■□□□□ 0.54
AP000253.1-201ENST00000449339 ISM2Q6H9L7 571 aa18.39■□□□□ 0.54
AP000253.1-201ENST00000449339 CCDC186Q7Z3E2 898 aa18.39■□□□□ 0.54
AP000253.1-201ENST00000449339 PPP1R1BQ9UD71 204 aaPredicted RBP18.39■□□□□ 0.54
AP000253.1-201ENST00000449339 ZBTB12Q9Y330 459 aaPredicted RBP18.39■□□□□ 0.54
AP000253.1-201ENST00000449339 FRMPD2Q68DX3 1309 aaPredicted RBP18.39■□□□□ 0.53
AP000253.1-201ENST00000449339 WWC2Q6AWC2 1192 aa18.39■□□□□ 0.53
AP000253.1-201ENST00000449339 ELOA2Q8IYF1 753 aaPredicted RBP18.39■□□□□ 0.53
AP000253.1-201ENST00000449339 CSRNP2Q9H175 543 aa18.39■□□□□ 0.53
AP000253.1-201ENST00000449339 NRBP1Q9UHY1 535 aa18.39■□□□□ 0.53
AP000253.1-201ENST00000449339 POLR2DO15514 142 aaKnown RBP18.38■□□□□ 0.53
AP000253.1-201ENST00000449339 BMP15O95972 392 aa18.38■□□□□ 0.53
AP000253.1-201ENST00000449339 RSBN1LQ6PCB5 846 aaPredicted RBP18.38■□□□□ 0.53
AP000253.1-201ENST00000449339 VAT1LQ9HCJ6 419 aa18.38■□□□□ 0.53
AP000253.1-201ENST00000449339 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.38■□□□□ 0.53
AP000253.1-201ENST00000449339 NOLC1Q14978 699 aaKnown RBP eCLIP18.38■□□□□ 0.53
AP000253.1-201ENST00000449339 GRIPAP1Q4V328 841 aa18.38■□□□□ 0.53
AP000253.1-201ENST00000449339 HEATR3Q7Z4Q2 680 aa18.38■□□□□ 0.53
AP000253.1-201ENST00000449339 UBA5Q9GZZ9 404 aa18.38■□□□□ 0.53
AP000253.1-201ENST00000449339 PIM2Q9P1W9 311 aa18.38■□□□□ 0.53
AP000253.1-201ENST00000449339 HOOK1Q9UJC3 728 aaKnown RBP18.38■□□□□ 0.53
AP000253.1-201ENST00000449339 PDHBP11177 359 aa18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 MDM2Q00987 491 aaPredicted RBP18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 ATP2B2Q01814 1243 aa18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 PIK3AP1Q6ZUJ8 805 aa18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 FOXP4Q8IVH2 680 aaPredicted RBP18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 RASGRP4Q8TDF6 673 aa18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 EHD4Q9H223 541 aa18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 PCDHA5Q9Y5H7 936 aa18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 GREB1LQ9C091 1923 aaPredicted RBP18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 CALML3P27482 149 aa18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 R3HDM1Q15032 1099 aaKnown RBP18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 TTC38Q5R3I4 469 aa18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 USP49Q70CQ1 688 aa18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 HOMER1Q86YM7 354 aa18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 C17orf53Q8N3J3 647 aaPredicted RBP18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 SH3GLB2Q9NR46 395 aa18.37■□□□□ 0.53
AP000253.1-201ENST00000449339 MYO3BQ8WXR4 1341 aa18.36■□□□□ 0.53
AP000253.1-201ENST00000449339 FOXN1O15353 648 aa18.36■□□□□ 0.53
AP000253.1-201ENST00000449339 TTLL1O95922 423 aa18.36■□□□□ 0.53
AP000253.1-201ENST00000449339 VIL1P09327 827 aaKnown RBP18.36■□□□□ 0.53
AP000253.1-201ENST00000449339 ZNF174Q15697 407 aa18.36■□□□□ 0.53
AP000253.1-201ENST00000449339 PDILTQ8N807 584 aa18.36■□□□□ 0.53
AP000253.1-201ENST00000449339 KIAA1524Q8TCG1 905 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms