RNA–Protein interactions for RNA: ENST00000449202.5

CLIP4-207, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-207ENST00000449202 POLR3KQ9Y2Y1 108 aaPredicted RBP5.9□□□□□ -1.46
CLIP4-207ENST00000449202 MAPK8IP3Q9UPT6 1336 aa5.9□□□□□ -1.47
CLIP4-207ENST00000449202 ANKRD30BQ9BXX2 1392 aa5.9□□□□□ -1.47
CLIP4-207ENST00000449202 ROBO2Q9HCK4 1378 aa5.9□□□□□ -1.47
CLIP4-207ENST00000449202 FHOD3Q2V2M9 1422 aa5.9□□□□□ -1.47
CLIP4-207ENST00000449202 SCAPERQ9BY12 1400 aa5.9□□□□□ -1.47
CLIP4-207ENST00000449202 KDM5CP41229 1560 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 E9PCH4 1651 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 MINDY4BA8MYZ0 360 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 H3BS24 57 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 HTR3BO95264 441 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 TNK2Q07912 1038 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 REC114Q7Z4M0 266 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 MTERF4Q7Z6M4 381 aaKnown RBP5.89□□□□□ -1.47
CLIP4-207ENST00000449202 POU5F2Q8N7G0 328 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 MPHOSPH9Q99550 1183 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 LRRC3Q9BY71 257 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 CARS2Q9HA77 564 aaKnown RBP5.89□□□□□ -1.47
CLIP4-207ENST00000449202 COPRSQ9NQ92 184 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 PRDM7Q9NQW5 492 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 REV1Q9UBZ9 1251 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 KIF7Q2M1P5 1343 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 CARMIL2Q6F5E8 1435 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 ADGRL2O95490 1459 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 SHANK2Q9UPX8 1470 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 CLASP1Q7Z460 1538 aa5.89□□□□□ -1.47
CLIP4-207ENST00000449202 UPK3BL1B0FP48 263 aa5.88□□□□□ -1.47
CLIP4-207ENST00000449202 UPK3BL2E5RIL1 263 aa5.88□□□□□ -1.47
CLIP4-207ENST00000449202 NCLP19338 710 aaKnown RBP5.88□□□□□ -1.47
CLIP4-207ENST00000449202 CWF19L2Q2TBE0 894 aaKnown RBP5.88□□□□□ -1.47
CLIP4-207ENST00000449202 OGFOD2Q6N063 350 aa5.88□□□□□ -1.47
CLIP4-207ENST00000449202 HS2ST1Q7LGA3 356 aa5.88□□□□□ -1.47
CLIP4-207ENST00000449202 TMPRSS7Q7RTY8 843 aa5.88□□□□□ -1.47
CLIP4-207ENST00000449202 UBE2FQ969M7 185 aa5.88□□□□□ -1.47
CLIP4-207ENST00000449202 MAP7D2Q96T17 732 aa5.88□□□□□ -1.47
CLIP4-207ENST00000449202 CTNND2Q9UQB3 1225 aa5.88□□□□□ -1.47
CLIP4-207ENST00000449202 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.88□□□□□ -1.47
CLIP4-207ENST00000449202 USP47Q96K76 1375 aa5.88□□□□□ -1.47
CLIP4-207ENST00000449202 KIAA1107Q9UPP5 1409 aa5.88□□□□□ -1.47
CLIP4-207ENST00000449202 KDM5DQ9BY66 1539 aa5.88□□□□□ -1.47
CLIP4-207ENST00000449202 GRIN3BO60391 1043 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 GREM1O60565 184 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 EIF4A3P38919 411 aaKnown RBP5.87□□□□□ -1.47
CLIP4-207ENST00000449202 FBXL19Q6PCT2 694 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 FBXO27Q8NI29 283 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 PNISRQ8TF01 805 aaKnown RBP5.87□□□□□ -1.47
CLIP4-207ENST00000449202 RNF141Q8WVD5 230 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 TMEM40Q8WWA1 233 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 FAM168AQ92567 244 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 CCDC120Q96HB5 630 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 Q96M66 194 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 ZSWIM5Q9P217 1185 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 GGT7Q9UJ14 662 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 DHX29Q7Z478 1369 aaKnown RBP5.87□□□□□ -1.47
CLIP4-207ENST00000449202 DAPK1P53355 1430 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 LAMC3Q9Y6N6 1575 aa5.87□□□□□ -1.47
CLIP4-207ENST00000449202 CROCC2H7BZ55 1655 aa5.86□□□□□ -1.47
CLIP4-207ENST00000449202 FANCD2Q9BXW9 1451 aa5.86□□□□□ -1.47
CLIP4-207ENST00000449202 BLMP54132 1417 aaPredicted RBP5.86□□□□□ -1.47
CLIP4-207ENST00000449202 YBX3P16989 372 aaKnown RBP eCLIP5.86□□□□□ -1.47
CLIP4-207ENST00000449202 ZNF16P17020 682 aaPredicted RBP5.86□□□□□ -1.47
CLIP4-207ENST00000449202 GDNFP39905 211 aa5.86□□□□□ -1.47
CLIP4-207ENST00000449202 IRX6P78412 446 aaPredicted RBP5.86□□□□□ -1.47
CLIP4-207ENST00000449202 MLECQ14165 292 aa5.86□□□□□ -1.47
CLIP4-207ENST00000449202 LCE3BQ5TA77 95 aa5.86□□□□□ -1.47
CLIP4-207ENST00000449202 ZSWIM9Q86XI8 627 aa5.86□□□□□ -1.47
CLIP4-207ENST00000449202 GPR62Q9BZJ7 368 aa5.86□□□□□ -1.47
CLIP4-207ENST00000449202 DUSP15Q9H1R2 295 aaPredicted RBP5.86□□□□□ -1.47
CLIP4-207ENST00000449202 TRIT1Q9H3H1 467 aaKnown RBP5.86□□□□□ -1.47
CLIP4-207ENST00000449202 KLHL3Q9UH77 587 aa5.86□□□□□ -1.47
CLIP4-207ENST00000449202 KCNH3Q9ULD8 1083 aa5.86□□□□□ -1.47
CLIP4-207ENST00000449202 IQGAP2Q13576 1575 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 EPRSP07814 1512 aaKnown RBP5.85□□□□□ -1.47
CLIP4-207ENST00000449202 NUP160Q12769 1436 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 CHURC1-FNTBB4DL54 471 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 TLR3O15455 904 aaKnown RBP5.85□□□□□ -1.47
CLIP4-207ENST00000449202 TPM2P07951 284 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 AFMP43652 599 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 TNNI2P48788 182 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 RBM25P49756 843 aaKnown RBP5.85□□□□□ -1.47
CLIP4-207ENST00000449202 TERF1P54274 439 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 GAB4Q2WGN9 574 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 DTWD2Q8NBA8 298 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 ZNF296Q8WUU4 475 aaPredicted RBP5.85□□□□□ -1.47
CLIP4-207ENST00000449202 ANP32BQ92688 251 aaKnown RBP5.85□□□□□ -1.47
CLIP4-207ENST00000449202 CCDC74BQ96LY2 380 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 ASPNQ9BXN1 380 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 GPATCH2Q9NW75 528 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 ADCY10Q96PN6 1610 aa5.85□□□□□ -1.47
CLIP4-207ENST00000449202 PLXNC1O60486 1568 aa5.84□□□□□ -1.47
CLIP4-207ENST00000449202 TOPBP1Q92547 1522 aa5.84□□□□□ -1.47
CLIP4-207ENST00000449202 PTPRKQ15262 1439 aa5.84□□□□□ -1.47
CLIP4-207ENST00000449202 PARD3Q8TEW0 1356 aa5.84□□□□□ -1.47
CLIP4-207ENST00000449202 CENPJQ9HC77 1338 aaPredicted RBP5.84□□□□□ -1.47
CLIP4-207ENST00000449202 DNAJA2O60884 412 aa5.84□□□□□ -1.47
CLIP4-207ENST00000449202 ATE1O95260 518 aa5.84□□□□□ -1.47
CLIP4-207ENST00000449202 ESR1P03372 595 aa5.84□□□□□ -1.47
CLIP4-207ENST00000449202 HSP90AA1P07900 732 aaKnown RBP5.84□□□□□ -1.47
CLIP4-207ENST00000449202 SRFP11831 508 aa5.84□□□□□ -1.47
CLIP4-207ENST00000449202 KCNMB1Q16558 191 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms