RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 USP17L13C9JLJ4 530 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 USP17L11C9JVI0 530 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 USP17L18D6R9N7 530 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 USP17L22D6RA61 530 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 USP17L17D6RBQ6 530 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 USP17L19D6RCP7 530 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 USP17L20D6RJB6 530 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 HMGB1P09429 215 aaKnown RBP10.8□□□□□ -0.68
RFX3-207ENST00000449190 CTGFP29279 349 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 USP17L24Q0WX57 530 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 SART3Q15020 963 aaKnown RBP10.8□□□□□ -0.68
RFX3-207ENST00000449190 FAM110CQ1W6H9 321 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 CATSPERGQ6ZRH7 1159 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 NBPF11Q86T75 865 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 SIAH1Q8IUQ4 282 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 ANKRD13CQ8N6S4 541 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 GTF3C2Q8WUA4 911 aaPredicted RBP10.8□□□□□ -0.68
RFX3-207ENST00000449190 TRIM47Q96LD4 638 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 FEZ1Q99689 392 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 UBAC1Q9BSL1 405 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 ARHGEF10LQ9HCE6 1279 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 MORF4L1Q9UBU8 362 aa10.8□□□□□ -0.68
RFX3-207ENST00000449190 NAV1Q8NEY1 1877 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 A0A1W2PRG0 241 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 KDM4AO75164 1064 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 MCM5P33992 734 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 ICA1Q05084 483 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 TSGA10IPQ3SY00 556 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 ARMC5Q96C12 935 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 NEK1Q96PY6 1258 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 NBPF3Q9H094 633 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 TCP11L1Q9NUJ3 509 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 CLIP2Q9UDT6 1046 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 TMX2Q9Y320 296 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 SNX14Q9Y5W7 946 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 PTCH2Q9Y6C5 1203 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 PHIPQ8WWQ0 1821 aa10.79□□□□□ -0.68
RFX3-207ENST00000449190 TTLL1O95922 423 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 ANAPC15P60006 121 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 HERVK_113P62684 666 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 FGD1P98174 961 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 ZYXQ15942 572 aaKnown RBP10.78□□□□□ -0.68
RFX3-207ENST00000449190 GPRC5AQ8NFJ5 357 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 KCNB2Q92953 911 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 COA7Q96BR5 231 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 JAKMIP1Q96N16 626 aaKnown RBP10.78□□□□□ -0.68
RFX3-207ENST00000449190 TTC14Q96N46 770 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 BACH2Q9BYV9 841 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 C22orf23Q9BZE7 217 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 HOXC10Q9NYD6 342 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 ZSWIM5Q9P217 1185 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 NYAP2Q9P242 653 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 RBPJLQ9UBG7 517 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 STX8Q9UNK0 236 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 NEDD4P46934 1319 aa10.78□□□□□ -0.68
RFX3-207ENST00000449190 TNPO2O14787 897 aaKnown RBP10.77□□□□□ -0.69
RFX3-207ENST00000449190 IFIT3O14879 490 aaKnown RBP10.77□□□□□ -0.69
RFX3-207ENST00000449190 RAD21O60216 631 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 ECM2O94769 699 aaPredicted RBP10.77□□□□□ -0.69
RFX3-207ENST00000449190 EEF2P13639 858 aaKnown RBP10.77□□□□□ -0.69
RFX3-207ENST00000449190 VCAM1P19320 739 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 IRF5Q13568 498 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 COG2Q14746 738 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 Q3C1V9 767 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 SLC9C1Q4G0N8 1177 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 BLOC1S2Q6QNY1 142 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 LBX2Q6XYB7 198 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 RAET1EQ8TD07 263 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 LPAR1Q92633 364 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 CEP95Q96GE4 821 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 ZSCAN10Q96SZ4 725 aaPredicted RBP10.77□□□□□ -0.69
RFX3-207ENST00000449190 GOPCQ9HD26 462 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 MTMR4Q9NYA4 1195 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 RABGAP1Q9Y3P9 1069 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 TACC3Q9Y6A5 838 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 TAF6LQ9Y6J9 622 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 MYPNQ86TC9 1320 aa10.77□□□□□ -0.69
RFX3-207ENST00000449190 IGKV6D-41A0A0C4DH26 115 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 PRC1O43663 620 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 TOP1P11387 765 aaKnown RBP10.76□□□□□ -0.69
RFX3-207ENST00000449190 GRK4P32298 578 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 FLT3LGP49771 235 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 SOX10P56693 466 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 PRKCZQ05513 592 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 WTAPQ15007 396 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 TMEM67Q5HYA8 995 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 IFIT1BQ5T764 474 aaKnown RBP10.76□□□□□ -0.69
RFX3-207ENST00000449190 STOX1Q6ZVD7 989 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 CYB5R4Q7L1T6 521 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 DHX32Q7L7V1 743 aaKnown RBP10.76□□□□□ -0.69
RFX3-207ENST00000449190 DGKHQ86XP1 1220 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 TMTC2Q8N394 836 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 PXYLP1Q8TE99 480 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 MKL1Q969V6 931 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 ZNF333Q96JL9 665 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 TMEM87BQ96K49 555 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 ZKSCAN3Q9BRR0 538 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 MTA3Q9BTC8 594 aa10.76□□□□□ -0.69
RFX3-207ENST00000449190 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.76□□□□□ -0.69
RFX3-207ENST00000449190 TMEM106CQ9BVX2 250 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms