RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MXD3Q9BW11 206 aa12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 IDI2Q9BXS1 227 aa12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 SH3GLB2Q9NR46 395 aa12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 ADAMTSL1Q8N6G6 1762 aa12.16□□□□□ -0.46
VIPAS39-203ENST00000448935 GRXCR2A6NFK2 248 aa12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 BTBD18B2RXH4 712 aa12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 IRF6O14896 467 aa12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 NR1I2O75469 434 aa12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 CAVIN2O95810 425 aa12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 DPEP1P16444 411 aa12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 SMARCA1P28370 1054 aa12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 CCDC17Q96LX7 622 aa12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 ARID3AQ99856 593 aa12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 PANK2Q9BZ23 570 aa12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 PDGFDQ9GZP0 370 aaPredicted RBP12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 HDAC9Q9UKV0 1011 aa12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 NOL7Q9UMY1 257 aaKnown RBP12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 KCNJ14Q9UNX9 436 aa12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 MORC2Q9Y6X9 1032 aaPredicted RBP12.15□□□□□ -0.46
VIPAS39-203ENST00000448935 PALM3A6NDB9 673 aaPredicted RBP12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 TTLL13PA6NNM8 815 aa12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 BMP15O95972 392 aa12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 CMA1P23946 247 aa12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 SASS6Q6UVJ0 657 aa12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 PARP9Q8IXQ6 854 aa12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 MICALL2Q8IY33 904 aa12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 FUCA2Q9BTY2 467 aa12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 MTFR1LQ9H019 292 aa12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 DDX4Q9NQI0 724 aaKnown RBP12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 KCNQ5Q9NR82 932 aa12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 VPS54Q9P1Q0 977 aa12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 PIM2Q9P1W9 311 aa12.15□□□□□ -0.47
VIPAS39-203ENST00000448935 COL2A1P02458 1487 aaPredicted RBP12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 UBE2Q2LH0YL09 131 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 CUTAO60888 179 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 PARP1P09874 1014 aaKnown RBP12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 KCNA3P22001 575 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 PTPAQ15257 358 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 GALNT17Q6IS24 598 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 LARGE2Q8N3Y3 721 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 ENGASEQ8NFI3 743 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 CCDC148Q8NFR7 591 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 SPZ1Q9BXG8 430 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 TRIM34Q9BYJ4 488 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 TMOD2Q9NZR1 351 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 PI4KBQ9UBF8 816 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 MAD2L2Q9UI95 211 aa12.14□□□□□ -0.47
VIPAS39-203ENST00000448935 ENTPD3O75355 529 aa12.13□□□□□ -0.47
VIPAS39-203ENST00000448935 NLRP5P59047 1200 aa12.13□□□□□ -0.47
VIPAS39-203ENST00000448935 RSBN1LQ6PCB5 846 aaPredicted RBP12.13□□□□□ -0.47
VIPAS39-203ENST00000448935 FOXP4Q8IVH2 680 aaPredicted RBP12.13□□□□□ -0.47
VIPAS39-203ENST00000448935 CCDC12Q8WUD4 166 aaPredicted RBP12.13□□□□□ -0.47
VIPAS39-203ENST00000448935 CEP95Q96GE4 821 aa12.13□□□□□ -0.47
VIPAS39-203ENST00000448935 PPP1R9BQ96SB3 815 aa12.13□□□□□ -0.47
VIPAS39-203ENST00000448935 MTMR4Q9NYA4 1195 aa12.13□□□□□ -0.47
VIPAS39-203ENST00000448935 YDJCA8MPS7 323 aa12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 hCG_1984214I3L0E3 225 aa12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 TTLL1O95922 423 aa12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 VIL1P09327 827 aaKnown RBP12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 TRAPPC10P48553 1259 aa12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 MMP14P50281 582 aa12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 SNW1Q13573 536 aaKnown RBP12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 CAMK4Q16566 473 aa12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 CFAP100Q494V2 611 aa12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 ASPRV1Q53RT3 343 aa12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 AXDND1Q5T1B0 1012 aaPredicted RBP12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 NIM1KQ8IY84 436 aa12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 FMR1NBQ8N0W7 255 aaPredicted RBP12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 ZNF713Q8N859 430 aaPredicted RBP12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 TRIM44Q96DX7 344 aaPredicted RBP12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 TIGD1Q96MW7 591 aa12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 GREB1LQ9C091 1923 aaPredicted RBP12.12□□□□□ -0.47
VIPAS39-203ENST00000448935 IGKV6D-41A0A0C4DH26 115 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 TRIM75PA6NK02 468 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 KLRF2D3W0D1 207 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 SHMT1P34896 483 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 TYRO3Q06418 890 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 NR5A1Q13285 461 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 ZSCAN29Q8IWY8 852 aaPredicted RBP12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 PLPP6Q8IY26 295 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 RNF214Q8ND24 703 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 SDF4Q9BRK5 362 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 GOLPH3LQ9H4A5 285 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 CABP5Q9NP86 173 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 FAM237AA0A1B0GTK4 181 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 A0A1B0GVL5 298 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 AKR1B1P15121 316 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 MARCKSP29966 332 aaPredicted RBP12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 NFIAQ12857 509 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 STAG2Q8N3U4 1231 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 AGBL3Q8NEM8 1001 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 FAM200AQ8TCP9 573 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 RRP36Q96EU6 259 aaKnown RBP12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 FAM13BQ9NYF5 915 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 SEC63Q9UGP8 760 aaKnown RBP12.11□□□□□ -0.47
VIPAS39-203ENST00000448935 ZNRF3Q9ULT6 936 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms