RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 VCPKMTQ9H867 229 aa21.76■■□□□ 1.07
CHCHD3-203ENST00000448878 TMX2Q9Y320 296 aa21.76■■□□□ 1.07
CHCHD3-203ENST00000448878 WDR46O15213 610 aaKnown RBP21.75■■□□□ 1.07
CHCHD3-203ENST00000448878 KCTD2Q14681 263 aa21.75■■□□□ 1.07
CHCHD3-203ENST00000448878 HSP90AB4PQ58FF6 505 aa21.75■■□□□ 1.07
CHCHD3-203ENST00000448878 AMOTL1Q8IY63 956 aa21.75■■□□□ 1.07
CHCHD3-203ENST00000448878 IFIT2P09913 472 aaKnown RBP21.74■■□□□ 1.07
CHCHD3-203ENST00000448878 C1orf53Q5VUE5 145 aa21.74■■□□□ 1.07
CHCHD3-203ENST00000448878 SIAH1Q8IUQ4 282 aa21.74■■□□□ 1.07
CHCHD3-203ENST00000448878 CLASRPQ8N2M8 674 aaKnown RBP21.74■■□□□ 1.07
CHCHD3-203ENST00000448878 RHPN1Q8TCX5 695 aa21.74■■□□□ 1.07
CHCHD3-203ENST00000448878 TMEM39AQ9NV64 488 aa21.74■■□□□ 1.07
CHCHD3-203ENST00000448878 PHF24Q9UPV7 400 aa21.74■■□□□ 1.07
CHCHD3-203ENST00000448878 PRKAB2O43741 272 aa21.73■■□□□ 1.07
CHCHD3-203ENST00000448878 ITGB8P26012 769 aa21.73■■□□□ 1.07
CHCHD3-203ENST00000448878 TINF2Q9BSI4 451 aa21.73■■□□□ 1.07
CHCHD3-203ENST00000448878 FBXO28Q9NVF7 368 aa21.73■■□□□ 1.07
CHCHD3-203ENST00000448878 A0A0G2JMZ2 1700 aa21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 CYP2D7A0A087X1C5 515 aa21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 A0A1W2PQ45 241 aaPredicted RBP21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 A0A1W2PQY0 241 aa21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 MBD4O95243 580 aa21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 EEF2P13639 858 aaKnown RBP21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 TAL1P17542 331 aaPredicted RBP21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 STAT3P40763 770 aa21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 SLC4A3P48751 1232 aa21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 CDK8P49336 464 aa21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 DDRGK1Q96HY6 314 aa21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 CCDC17Q96LX7 622 aa21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 ATP8A2Q9NTI2 1148 aa21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 NRBP1Q9UHY1 535 aa21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 CNPY2Q9Y2B0 182 aa21.72■■□□□ 1.07
CHCHD3-203ENST00000448878 ZNFX1Q9P2E3 1918 aaKnown RBP21.71■■□□□ 1.07
CHCHD3-203ENST00000448878 TCRBV5S4A2TA0A5A2 114 aa21.71■■□□□ 1.07
CHCHD3-203ENST00000448878 AKR1A1P14550 325 aa21.71■■□□□ 1.07
CHCHD3-203ENST00000448878 EPHB4P54760 987 aa21.71■■□□□ 1.07
CHCHD3-203ENST00000448878 FPGSQ05932 587 aa21.71■■□□□ 1.07
CHCHD3-203ENST00000448878 SLFNL1Q499Z3 407 aa21.71■■□□□ 1.07
CHCHD3-203ENST00000448878 RIOX2Q8IUF8 465 aa21.71■■□□□ 1.07
CHCHD3-203ENST00000448878 LENG1Q96BZ8 264 aaPredicted RBP21.71■■□□□ 1.07
CHCHD3-203ENST00000448878 MYH8P13535 1937 aa21.7■■□□□ 1.07
CHCHD3-203ENST00000448878 DCDC2CA8MYV0 355 aa21.7■■□□□ 1.06
CHCHD3-203ENST00000448878 ZNF792Q3KQV3 632 aa21.7■■□□□ 1.06
CHCHD3-203ENST00000448878 SYMPKQ92797 1274 aaKnown RBP21.7■■□□□ 1.06
CHCHD3-203ENST00000448878 BOLA2Q9H3K6 86 aa21.7■■□□□ 1.06
CHCHD3-203ENST00000448878 GOPCQ9HD26 462 aa21.7■■□□□ 1.06
CHCHD3-203ENST00000448878 STARD7Q9NQZ5 370 aa21.7■■□□□ 1.06
CHCHD3-203ENST00000448878 EYSQ5T1H1 3165 aa21.7■■□□□ 1.06
CHCHD3-203ENST00000448878 SMCHD1A6NHR9 2005 aa21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 USP17L12C9JPN9 530 aa21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 USP17L21D6R901 530 aa21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 SMIM22K7EJ46 135 aa21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 VWA5AO00534 786 aa21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 FAM83BQ5T0W9 1011 aa21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 NUP133Q8WUM0 1156 aa21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 VTI1AQ96AJ9 217 aa21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 KIF1BPQ96EK5 621 aa21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 DDX11Q96FC9 970 aa21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 KANSL2Q9H9L4 492 aa21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 PAG1Q9NWQ8 432 aa21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 DIS3Q9Y2L1 958 aaKnown RBP21.69■■□□□ 1.06
CHCHD3-203ENST00000448878 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.68■■□□□ 1.06
CHCHD3-203ENST00000448878 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.68■■□□□ 1.06
CHCHD3-203ENST00000448878 KIAA0355O15063 1070 aa21.68■■□□□ 1.06
CHCHD3-203ENST00000448878 ZNF865P0CJ78 1059 aaPredicted RBP21.68■■□□□ 1.06
CHCHD3-203ENST00000448878 C12orf60Q5U649 245 aa21.68■■□□□ 1.06
CHCHD3-203ENST00000448878 PANK1Q8TE04 598 aa21.68■■□□□ 1.06
CHCHD3-203ENST00000448878 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.68■■□□□ 1.06
CHCHD3-203ENST00000448878 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.68■■□□□ 1.065e-14■□□□□ 9
CHCHD3-203ENST00000448878 COL11A1P12107 1806 aaPredicted RBP21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 TMEM265A0A087WTH1 108 aa21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 DNAJB2P25686 324 aa21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 ADD2P35612 726 aa21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 ACLYP53396 1101 aa21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 FAAP100Q0VG06 881 aa21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 GRIN2CQ14957 1233 aa21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 STK11IPQ8N1F8 1099 aa21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 PRDM6Q9NQX0 595 aa21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 ZHX1Q9UKY1 873 aaPredicted RBP21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 FAM184BQ9ULE4 1060 aa21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 PPP1R9AQ9ULJ8 1098 aa21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 ADAMTS5Q9UNA0 930 aa21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 CTDP1Q9Y5B0 961 aaPredicted RBP21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 SLC4A4Q9Y6R1 1079 aa21.67■■□□□ 1.06
CHCHD3-203ENST00000448878 COPB2P35606 906 aa21.66■■□□□ 1.06
CHCHD3-203ENST00000448878 KCNA10Q16322 511 aa21.66■■□□□ 1.06
CHCHD3-203ENST00000448878 C16orf86Q6ZW13 317 aa21.66■■□□□ 1.06
CHCHD3-203ENST00000448878 PPM1EQ8WY54 764 aa21.66■■□□□ 1.06
CHCHD3-203ENST00000448878 TSEN34Q9BSV6 310 aaKnown RBP21.66■■□□□ 1.06
CHCHD3-203ENST00000448878 BAZ2AQ9UIF9 1905 aaKnown RBP21.66■■□□□ 1.06
CHCHD3-203ENST00000448878 PLXNA1Q9UIW2 1896 aa21.65■■□□□ 1.06
CHCHD3-203ENST00000448878 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.06
CHCHD3-203ENST00000448878 SNRNP48Q6IEG0 339 aaKnown RBP21.65■■□□□ 1.06
CHCHD3-203ENST00000448878 CCDC129Q6ZRS4 1044 aa21.65■■□□□ 1.06
CHCHD3-203ENST00000448878 NUP88Q99567 741 aaPredicted RBP21.65■■□□□ 1.06
CHCHD3-203ENST00000448878 ZNF214Q9UL59 606 aaPredicted RBP21.65■■□□□ 1.06
CHCHD3-203ENST00000448878 SYNRGQ9UMZ2 1314 aa21.64■■□□□ 1.05
CHCHD3-203ENST00000448878 ADAMTS4O75173 837 aa21.64■■□□□ 1.05
CHCHD3-203ENST00000448878 CPXCR1Q8N123 301 aa21.64■■□□□ 1.05
CHCHD3-203ENST00000448878 TOX2Q96NM4 488 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms