RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 PAGR1Q9BTK6 254 aa29.7■■■□□ 2.35
HTATSF1-203ENST00000448450 ANAPC4Q9UJX5 808 aa29.7■■■□□ 2.35
HTATSF1-203ENST00000448450 LRCH3Q96II8 777 aa29.69■■■□□ 2.34
HTATSF1-203ENST00000448450 TANGO6Q9C0B7 1094 aa29.69■■■□□ 2.34
HTATSF1-203ENST00000448450 C11orf49Q9H6J7 331 aa29.69■■■□□ 2.34
HTATSF1-203ENST00000448450 TXNRD2Q9NNW7 524 aa29.69■■■□□ 2.34
HTATSF1-203ENST00000448450 RBPJLQ9UBG7 517 aa29.69■■■□□ 2.34
HTATSF1-203ENST00000448450 CLIP2Q9UDT6 1046 aa29.69■■■□□ 2.34
HTATSF1-203ENST00000448450 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.69■■■□□ 2.34
HTATSF1-203ENST00000448450 XRCC5P13010 732 aaKnown RBP29.68■■■□□ 2.34
HTATSF1-203ENST00000448450 PRKAR2AP13861 404 aaKnown RBP29.68■■■□□ 2.34
HTATSF1-203ENST00000448450 MAPK4P31152 587 aa29.68■■■□□ 2.34
HTATSF1-203ENST00000448450 POTEEQ6S8J3 1075 aa29.68■■■□□ 2.34
HTATSF1-203ENST00000448450 CCAR1Q8IX12 1150 aaKnown RBP29.68■■■□□ 2.34
HTATSF1-203ENST00000448450 NEDD1Q8NHV4 660 aa29.68■■■□□ 2.34
HTATSF1-203ENST00000448450 GDF15Q99988 308 aa29.68■■■□□ 2.34
HTATSF1-203ENST00000448450 IL25Q9H293 177 aa29.68■■■□□ 2.34
HTATSF1-203ENST00000448450 TOMM22Q9NS69 142 aa29.68■■■□□ 2.34
HTATSF1-203ENST00000448450 OGDHLQ9ULD0 1010 aa29.68■■■□□ 2.34
HTATSF1-203ENST00000448450 ZMYND8Q9ULU4 1186 aaPredicted RBP29.68■■■□□ 2.34
HTATSF1-203ENST00000448450 GREB1LQ9C091 1923 aaPredicted RBP29.68■■■□□ 2.34
HTATSF1-203ENST00000448450 IGKV6D-41A0A0C4DH26 115 aa29.67■■■□□ 2.34
HTATSF1-203ENST00000448450 BMP8BP34820 402 aa29.67■■■□□ 2.34
HTATSF1-203ENST00000448450 MAP3K21Q5TCX8 1036 aa29.67■■■□□ 2.34
HTATSF1-203ENST00000448450 TRMT44Q8IYL2 757 aaKnown RBP29.67■■■□□ 2.34
HTATSF1-203ENST00000448450 GTF3C2Q8WUA4 911 aaPredicted RBP29.67■■■□□ 2.34
HTATSF1-203ENST00000448450 LPAR1Q92633 364 aa29.67■■■□□ 2.34
HTATSF1-203ENST00000448450 CEP95Q96GE4 821 aa29.67■■■□□ 2.34
HTATSF1-203ENST00000448450 GOPCQ9HD26 462 aa29.67■■■□□ 2.34
HTATSF1-203ENST00000448450 NYAP2Q9P242 653 aa29.67■■■□□ 2.34
HTATSF1-203ENST00000448450 A0A0C4DFX4 3053 aa29.66■■■□□ 2.34
HTATSF1-203ENST00000448450 RANBP6O60518 1105 aaKnown RBP29.66■■■□□ 2.34
HTATSF1-203ENST00000448450 CHMLP26374 656 aa29.66■■■□□ 2.34
HTATSF1-203ENST00000448450 Q3C1V9 767 aa29.66■■■□□ 2.34
HTATSF1-203ENST00000448450 RRP12Q5JTH9 1297 aaKnown RBP29.66■■■□□ 2.34
HTATSF1-203ENST00000448450 SAMD1Q6SPF0 538 aaPredicted RBP29.66■■■□□ 2.34
HTATSF1-203ENST00000448450 MTMR4Q9NYA4 1195 aa29.66■■■□□ 2.34
HTATSF1-203ENST00000448450 TSPY2A6NKD2 308 aa29.65■■■□□ 2.34
HTATSF1-203ENST00000448450 ZKSCAN1P17029 563 aaPredicted RBP29.65■■■□□ 2.34
HTATSF1-203ENST00000448450 MNX1P50219 401 aaPredicted RBP29.65■■■□□ 2.34
HTATSF1-203ENST00000448450 ZMYM6O95789 1325 aa29.65■■■□□ 2.34
HTATSF1-203ENST00000448450 ERVK-9P63128 1117 aa29.64■■■□□ 2.34
HTATSF1-203ENST00000448450 ERVK-24P63145 666 aa29.64■■■□□ 2.34
HTATSF1-203ENST00000448450 COG2Q14746 738 aa29.64■■■□□ 2.34
HTATSF1-203ENST00000448450 SLC17A8Q8NDX2 589 aa29.64■■■□□ 2.34
HTATSF1-203ENST00000448450 SPDYE16A6NNV3 312 aaPredicted RBP29.63■■■□□ 2.33
HTATSF1-203ENST00000448450 WDR46O15213 610 aaKnown RBP29.63■■■□□ 2.33
HTATSF1-203ENST00000448450 RUFY2Q8WXA3 655 aa29.63■■■□□ 2.33
HTATSF1-203ENST00000448450 HOXC10Q9NYD6 342 aa29.63■■■□□ 2.33
HTATSF1-203ENST00000448450 RABGAP1Q9Y3P9 1069 aa29.63■■■□□ 2.33
HTATSF1-203ENST00000448450 MYH4Q9Y623 1939 aa29.63■■■□□ 2.33
HTATSF1-203ENST00000448450 ORC4O43929 436 aa29.62■■■□□ 2.33
HTATSF1-203ENST00000448450 CNMDO75829 334 aa29.62■■■□□ 2.33
HTATSF1-203ENST00000448450 FLOT1O75955 427 aa29.62■■■□□ 2.33
HTATSF1-203ENST00000448450 TTLL1O95922 423 aa29.62■■■□□ 2.33
HTATSF1-203ENST00000448450 RGS2P41220 211 aa29.62■■■□□ 2.33
HTATSF1-203ENST00000448450 NUP88Q99567 741 aaPredicted RBP29.62■■■□□ 2.33
HTATSF1-203ENST00000448450 DSCC1Q9BVC3 393 aa29.62■■■□□ 2.33
HTATSF1-203ENST00000448450 F5H6K3 240 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 ZNF213O14771 459 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 NMT2O60551 498 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 FGRP09769 529 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 SYN1P17600 705 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 KLRC3Q07444 240 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 FAM83BQ5T0W9 1011 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 MFSD6Q6ZSS7 791 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 GPR142Q7Z601 462 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 TBC1D10CQ8IV04 446 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 LRRC47Q8N1G4 583 aaKnown RBP29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 PORCNQ9H237 461 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 CWC22Q9HCG8 908 aaKnown RBP29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 BTBD7Q9P203 1132 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 PLIN4Q96Q06 1357 aa29.61■■■□□ 2.33
HTATSF1-203ENST00000448450 AKNAD1Q5T1N1 836 aa29.6■■■□□ 2.33
HTATSF1-203ENST00000448450 GPR153Q6NV75 609 aa29.6■■■□□ 2.33
HTATSF1-203ENST00000448450 PLEKHH3Q7Z736 793 aa29.6■■■□□ 2.33
HTATSF1-203ENST00000448450 MKL1Q969V6 931 aa29.6■■■□□ 2.33
HTATSF1-203ENST00000448450 APBA2Q99767 749 aa29.6■■■□□ 2.33
HTATSF1-203ENST00000448450 IL17RBQ9NRM6 502 aa29.6■■■□□ 2.33
HTATSF1-203ENST00000448450 FBXO28Q9NVF7 368 aa29.6■■■□□ 2.33
HTATSF1-203ENST00000448450 PFASO15067 1338 aa29.6■■■□□ 2.33
HTATSF1-203ENST00000448450 DNAH12Q6ZR08 3092 aa29.6■■■□□ 2.33
HTATSF1-203ENST00000448450 NDUFB10O96000 172 aa29.59■■■□□ 2.33
HTATSF1-203ENST00000448450 DSG3P32926 999 aa29.59■■■□□ 2.33
HTATSF1-203ENST00000448450 MAGEA10P43363 369 aaPredicted RBP29.59■■■□□ 2.33
HTATSF1-203ENST00000448450 CACNB2Q08289 660 aaPredicted RBP29.59■■■□□ 2.33
HTATSF1-203ENST00000448450 LBX2Q6XYB7 198 aa29.59■■■□□ 2.33
HTATSF1-203ENST00000448450 USP6NLQ92738 828 aa29.59■■■□□ 2.33
HTATSF1-203ENST00000448450 CHMP4CQ96CF2 233 aa29.59■■■□□ 2.33
HTATSF1-203ENST00000448450 FRMPD3Q5JV73 1810 aa29.58■■■□□ 2.33
HTATSF1-203ENST00000448450 MORN1Q5T089 497 aa29.58■■■□□ 2.33
HTATSF1-203ENST00000448450 RAD50Q92878 1312 aa29.58■■■□□ 2.33
HTATSF1-203ENST00000448450 ATG4CQ96DT6 458 aa29.58■■■□□ 2.33
HTATSF1-203ENST00000448450 CTNNA3Q9UI47 895 aa29.58■■■□□ 2.33
HTATSF1-203ENST00000448450 STX8Q9UNK0 236 aa29.58■■■□□ 2.33
HTATSF1-203ENST00000448450 RLFQ13129 1914 aa29.57■■■□□ 2.32
HTATSF1-203ENST00000448450 TDHQ8IZJ6 230 aa29.57■■■□□ 2.32
HTATSF1-203ENST00000448450 STAG1Q8WVM7 1258 aa29.57■■■□□ 2.32
HTATSF1-203ENST00000448450 CCNA1P78396 465 aa29.56■■■□□ 2.32
HTATSF1-203ENST00000448450 PTH1RQ03431 593 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms