RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 MINDY4BA8MYZ0 360 aa33.89■■■■□ 3.02
CBX4-202ENST00000448310 RNF113AO15541 343 aaKnown RBP33.89■■■■□ 3.02
CBX4-202ENST00000448310 MSCO60682 206 aa33.89■■■■□ 3.02
CBX4-202ENST00000448310 SBK1Q52WX2 424 aa33.89■■■■□ 3.02
CBX4-202ENST00000448310 GOPCQ9HD26 462 aa33.89■■■■□ 3.02
CBX4-202ENST00000448310 RASA1P20936 1047 aa33.88■■■■□ 3.01
CBX4-202ENST00000448310 FAM83BQ5T0W9 1011 aa33.88■■■■□ 3.01
CBX4-202ENST00000448310 ANO1Q5XXA6 986 aa33.88■■■■□ 3.01
CBX4-202ENST00000448310 EPB41L4AQ9HCS5 686 aaPredicted RBP33.88■■■■□ 3.01
CBX4-202ENST00000448310 MYH4Q9Y623 1939 aa33.87■■■■□ 3.01
CBX4-202ENST00000448310 PLXNA1Q9UIW2 1896 aa33.87■■■■□ 3.01
CBX4-202ENST00000448310 M0R2C6 588 aa33.87■■■■□ 3.01
CBX4-202ENST00000448310 GPAA1O43292 621 aa33.87■■■■□ 3.01
CBX4-202ENST00000448310 ADAMTS5Q9UNA0 930 aa33.87■■■■□ 3.01
CBX4-202ENST00000448310 DNAH12Q6ZR08 3092 aa33.86■■■■□ 3.01
CBX4-202ENST00000448310 PRAMEF19Q5SWL8 479 aa33.86■■■■□ 3.01
CBX4-202ENST00000448310 GIMAP6Q6P9H5 292 aa33.86■■■■□ 3.01
CBX4-202ENST00000448310 ABRAQ8N0Z2 381 aa33.86■■■■□ 3.01
CBX4-202ENST00000448310 MKNK2Q9HBH9 465 aa33.86■■■■□ 3.01
CBX4-202ENST00000448310 PCDHB15Q9Y5E8 787 aa33.86■■■■□ 3.01
CBX4-202ENST00000448310 ROBO3Q96MS0 1386 aa33.85■■■■□ 3.01
CBX4-202ENST00000448310 FCER1AP12319 257 aa33.85■■■■□ 3.01
CBX4-202ENST00000448310 ATN1P54259 1190 aaPredicted RBP33.85■■■■□ 3.01
CBX4-202ENST00000448310 NUP88Q99567 741 aaPredicted RBP33.85■■■■□ 3.01
CBX4-202ENST00000448310 SLC5A4Q9NY91 659 aa33.85■■■■□ 3.01
CBX4-202ENST00000448310 PPP1R9AQ9ULJ8 1098 aa33.85■■■■□ 3.01
CBX4-202ENST00000448310 SLC25A27O95847 323 aa33.84■■■■□ 3.01
CBX4-202ENST00000448310 ZFYP08048 801 aaPredicted RBP33.84■■■■□ 3.01
CBX4-202ENST00000448310 GJC2Q5T442 439 aaPredicted RBP33.84■■■■□ 3.01
CBX4-202ENST00000448310 OTUD7AQ8TE49 926 aaPredicted RBP33.84■■■■□ 3.01
CBX4-202ENST00000448310 MAML3Q96JK9 1138 aa33.84■■■■□ 3.01
CBX4-202ENST00000448310 SMCHD1A6NHR9 2005 aa33.84■■■■□ 3.01
CBX4-202ENST00000448310 DNM1LO00429 736 aa33.83■■■■□ 3.01
CBX4-202ENST00000448310 VWA5AO00534 786 aa33.83■■■■□ 3.01
CBX4-202ENST00000448310 TDO2P48775 406 aa33.83■■■■□ 3.01
CBX4-202ENST00000448310 APPP05067 770 aa33.82■■■■□ 3
CBX4-202ENST00000448310 RIOX2Q8IUF8 465 aa33.82■■■■□ 3
CBX4-202ENST00000448310 MMP19Q99542 508 aa33.82■■■■□ 3
CBX4-202ENST00000448310 UBE2OQ9C0C9 1292 aaKnown RBP33.82■■■■□ 3
CBX4-202ENST00000448310 SEPT4O43236 478 aa33.81■■■■□ 3
CBX4-202ENST00000448310 PRDM1O75626 825 aa33.81■■■■□ 3
CBX4-202ENST00000448310 PGK2P07205 417 aa33.81■■■■□ 3
CBX4-202ENST00000448310 STAT3P40763 770 aa33.81■■■■□ 3
CBX4-202ENST00000448310 MDM2Q00987 491 aaPredicted RBP33.81■■■■□ 3
CBX4-202ENST00000448310 REPS2Q8NFH8 660 aa33.81■■■■□ 3
CBX4-202ENST00000448310 SEC62Q99442 399 aaKnown RBP33.81■■■■□ 3
CBX4-202ENST00000448310 ZNF214Q9UL59 606 aaPredicted RBP33.81■■■■□ 3
CBX4-202ENST00000448310 MYCNP04198 464 aaPredicted RBP33.8■■■■□ 3
CBX4-202ENST00000448310 TDHQ8IZJ6 230 aa33.8■■■■□ 3
CBX4-202ENST00000448310 PI4K2BQ8TCG2 481 aa33.8■■■■□ 3
CBX4-202ENST00000448310 NYAP2Q9P242 653 aa33.8■■■■□ 3
CBX4-202ENST00000448310 TTC41PQ6P2S7 1318 aa33.79■■■■□ 3
CBX4-202ENST00000448310 GNAT2P19087 354 aa33.79■■■■□ 3
CBX4-202ENST00000448310 ARRDC4Q8NCT1 418 aa33.79■■■■□ 3
CBX4-202ENST00000448310 F5H6K3 240 aa33.78■■■■□ 3
CBX4-202ENST00000448310 NDUFB10O96000 172 aa33.78■■■■□ 3
CBX4-202ENST00000448310 KLRC3Q07444 240 aa33.78■■■■□ 3
CBX4-202ENST00000448310 SLF1Q9BQI6 1058 aa33.78■■■■□ 3
CBX4-202ENST00000448310 CLIP2Q9UDT6 1046 aa33.78■■■■□ 3
CBX4-202ENST00000448310 IGKV6D-41A0A0C4DH26 115 aa33.77■■■■□ 3
CBX4-202ENST00000448310 PATL2C9JE40 543 aaKnown RBP33.77■■■■□ 3
CBX4-202ENST00000448310 KCTD2Q14681 263 aa33.77■■■■□ 3
CBX4-202ENST00000448310 IFNL3Q8IZI9 196 aa33.77■■■■□ 3
CBX4-202ENST00000448310 KBTBD13C9JR72 458 aa33.76■■■□□ 2.99
CBX4-202ENST00000448310 ERC2O15083 957 aa33.76■■■□□ 2.99
CBX4-202ENST00000448310 RTP1P59025 263 aa33.76■■■□□ 2.99
CBX4-202ENST00000448310 ZNF444Q8N0Y2 327 aaPredicted RBP33.76■■■□□ 2.99
CBX4-202ENST00000448310 FSD1Q9BTV5 496 aa33.76■■■□□ 2.99
CBX4-202ENST00000448310 LRRFIP1Q32MZ4 808 aaKnown RBP33.75■■■□□ 2.99
CBX4-202ENST00000448310 FAM47AQ5JRC9 791 aa33.75■■■□□ 2.99
CBX4-202ENST00000448310 CEP95Q96GE4 821 aa33.75■■■□□ 2.99
CBX4-202ENST00000448310 ZNF792Q3KQV3 632 aa33.74■■■□□ 2.99
CBX4-202ENST00000448310 LRIT3Q3SXY7 679 aa33.74■■■□□ 2.99
CBX4-202ENST00000448310 ATP11BQ9Y2G3 1177 aa33.74■■■□□ 2.99
CBX4-202ENST00000448310 SNRNP48Q6IEG0 339 aaKnown RBP33.73■■■□□ 2.99
CBX4-202ENST00000448310 TINF2Q9BSI4 451 aa33.73■■■□□ 2.99
CBX4-202ENST00000448310 LTBP2Q14767 1821 aa33.73■■■□□ 2.99
CBX4-202ENST00000448310 TAL1P17542 331 aaPredicted RBP33.72■■■□□ 2.99
CBX4-202ENST00000448310 COPB2P35606 906 aa33.72■■■□□ 2.99
CBX4-202ENST00000448310 SLC4A3P48751 1232 aa33.72■■■□□ 2.99
CBX4-202ENST00000448310 LRRC41Q15345 812 aa33.72■■■□□ 2.99
CBX4-202ENST00000448310 SLC39A5Q6ZMH5 540 aa33.72■■■□□ 2.99
CBX4-202ENST00000448310 LRRC47Q8N1G4 583 aaKnown RBP33.72■■■□□ 2.99
CBX4-202ENST00000448310 TEX13BQ9BXU2 312 aa33.72■■■□□ 2.99
CBX4-202ENST00000448310 ZNF287Q9HBT7 754 aa33.72■■■□□ 2.99
CBX4-202ENST00000448310 RIPK3Q9Y572 518 aa33.72■■■□□ 2.99
CBX4-202ENST00000448310 MX1P20591 662 aa33.71■■■□□ 2.99
CBX4-202ENST00000448310 RRP1P56182 461 aaKnown RBP33.71■■■□□ 2.99
CBX4-202ENST00000448310 ZMYM1Q5SVZ6 1142 aa33.71■■■□□ 2.99
CBX4-202ENST00000448310 FERMT2Q96AC1 680 aa33.71■■■□□ 2.99
CBX4-202ENST00000448310 NACAP1Q9BZK3 213 aa33.71■■■□□ 2.99
CBX4-202ENST00000448310 MTMR4Q9NYA4 1195 aa33.71■■■□□ 2.99
CBX4-202ENST00000448310 DIS3Q9Y2L1 958 aaKnown RBP33.71■■■□□ 2.99
CBX4-202ENST00000448310 ADCYAP1R1P41586 468 aa33.7■■■□□ 2.99
CBX4-202ENST00000448310 Q7L0L9 218 aa33.7■■■□□ 2.99
CBX4-202ENST00000448310 CPXCR1Q8N123 301 aa33.7■■■□□ 2.99
CBX4-202ENST00000448310 PRPF38AQ8NAV1 312 aaKnown RBP33.7■■■□□ 2.99
CBX4-202ENST00000448310 KIFC2Q96AC6 838 aa33.7■■■□□ 2.99
CBX4-202ENST00000448310 LBHD1Q9BQE6 289 aaPredicted RBP33.7■■■□□ 2.99
CBX4-202ENST00000448310 NAPBQ9H115 298 aa33.7■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms