RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 LSP1P33241 339 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 PDE4BQ07343 736 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 NNTQ13423 1086 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 PTPN21Q16825 1174 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 EMBQ6PCB8 327 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 CYP26C1Q6V0L0 522 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 CCDC129Q6ZRS4 1044 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 RUFY1Q96T51 708 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 PLCD4Q9BRC7 762 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 NUCKS1Q9H1E3 243 aaKnown RBP21.48■■□□□ 1.03
HMGA1-205ENST00000447654 PCDHA5Q9Y5H7 936 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 FDPSP14324 419 aaKnown RBP21.48■■□□□ 1.03
HMGA1-205ENST00000447654 PDIA3P30101 505 aaKnown RBP21.48■■□□□ 1.03
HMGA1-205ENST00000447654 GUCY1B3Q02153 619 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 RNF187Q5TA31 235 aaPredicted RBP21.48■■□□□ 1.03
HMGA1-205ENST00000447654 TICAM2Q86XR7 235 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 NEUROD6Q96NK8 337 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 HAUS7Q99871 368 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 HAUS4Q9H6D7 363 aa21.48■■□□□ 1.03
HMGA1-205ENST00000447654 ZNF609O15014 1411 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 FAM107AO95990 144 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 CCDC121Q6ZUS5 278 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 CENPHQ9H3R5 247 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 CPSF2Q9P2I0 782 aaKnown RBP21.47■■□□□ 1.03
HMGA1-205ENST00000447654 A0A0U1RQJ8 604 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 EYA2O00167 538 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 HSF2BPO75031 334 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 TFRCP02786 760 aaKnown RBP21.47■■□□□ 1.03
HMGA1-205ENST00000447654 PECAM1P16284 738 aaPredicted RBP21.47■■□□□ 1.03
HMGA1-205ENST00000447654 ATP2B2Q01814 1243 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 PDCLQ13371 301 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 TRIM14Q14142 442 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 FAM228AQ86W67 206 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 ATRIPQ8WXE1 791 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 MMS19Q96T76 1030 aa21.47■■□□□ 1.03
HMGA1-205ENST00000447654 ZMYM6O95789 1325 aa21.46■■□□□ 1.03
HMGA1-205ENST00000447654 PPP1R37O75864 691 aa21.46■■□□□ 1.03
HMGA1-205ENST00000447654 XRCC4Q13426 336 aa21.46■■□□□ 1.03
HMGA1-205ENST00000447654 PTGISQ16647 500 aa21.46■■□□□ 1.03
HMGA1-205ENST00000447654 CRELD2Q6UXH1 353 aaPredicted RBP21.46■■□□□ 1.03
HMGA1-205ENST00000447654 MICAL1Q8TDZ2 1067 aa21.46■■□□□ 1.03
HMGA1-205ENST00000447654 TPX2Q9ULW0 747 aaKnown RBP21.46■■□□□ 1.03
HMGA1-205ENST00000447654 LIN7AO14910 233 aaPredicted RBP21.46■■□□□ 1.03
HMGA1-205ENST00000447654 CYP19A1P11511 503 aaPredicted RBP21.46■■□□□ 1.03
HMGA1-205ENST00000447654 BMP6P22004 513 aa21.46■■□□□ 1.03
HMGA1-205ENST00000447654 TNFRSF8P28908 595 aa21.46■■□□□ 1.03
HMGA1-205ENST00000447654 EPHB4P54760 987 aa21.46■■□□□ 1.03
HMGA1-205ENST00000447654 MDM2Q00987 491 aaPredicted RBP21.46■■□□□ 1.03
HMGA1-205ENST00000447654 SHC4Q6S5L8 630 aa21.46■■□□□ 1.03
HMGA1-205ENST00000447654 MMGT1Q8N4V1 131 aa21.46■■□□□ 1.03
HMGA1-205ENST00000447654 CAVIN3Q969G5 261 aa21.46■■□□□ 1.03
HMGA1-205ENST00000447654 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.46■■□□□ 1.03
HMGA1-205ENST00000447654 ANO9A1A5B4 782 aa21.45■■□□□ 1.02
HMGA1-205ENST00000447654 MGRN1O60291 552 aa21.45■■□□□ 1.02
HMGA1-205ENST00000447654 ADAMTS2O95450 1211 aa21.45■■□□□ 1.02
HMGA1-205ENST00000447654 LACTB2Q53H82 288 aaPredicted RBP21.45■■□□□ 1.02
HMGA1-205ENST00000447654 NLRP14Q86W24 1093 aa21.45■■□□□ 1.02
HMGA1-205ENST00000447654 CCDC47Q96A33 483 aaKnown RBP21.45■■□□□ 1.02
HMGA1-205ENST00000447654 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.45■■□□□ 1.02
HMGA1-205ENST00000447654 MAN1B1Q9UKM7 699 aa21.45■■□□□ 1.02
HMGA1-205ENST00000447654 ZBTB1Q9Y2K1 713 aa21.45■■□□□ 1.02
HMGA1-205ENST00000447654 STARD3NLO95772 234 aa21.44■■□□□ 1.02
HMGA1-205ENST00000447654 CDC27P30260 824 aa21.44■■□□□ 1.02
HMGA1-205ENST00000447654 IL15P40933 162 aaPredicted RBP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 PLCD1P51178 756 aa21.44■■□□□ 1.02
HMGA1-205ENST00000447654 TRIM28Q13263 835 aaKnown RBP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 MORC3Q14149 939 aa21.44■■□□□ 1.02
HMGA1-205ENST00000447654 TTMPQ5BVD1 217 aa21.44■■□□□ 1.02
HMGA1-205ENST00000447654 APTXQ7Z2E3 356 aaKnown RBP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 FOXP4Q8IVH2 680 aaPredicted RBP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 ACRBPQ8NEB7 543 aa21.44■■□□□ 1.02
HMGA1-205ENST00000447654 CCT8L2Q96SF2 557 aa21.44■■□□□ 1.02
HMGA1-205ENST00000447654 AHDC1Q5TGY3 1603 aaPredicted RBP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 POLR3DP05423 398 aaPredicted RBP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 SARSP49591 514 aaKnown RBP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 CCT2P78371 535 aaKnown RBP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 FMR1Q06787 632 aaKnown RBP eCLIP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 ZC3H12AQ5D1E8 599 aaKnown RBP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 SND1Q7KZF4 910 aaKnown RBP eCLIP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 ZNF572Q7Z3I7 529 aaPredicted RBP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 OR8K1Q8NGG5 319 aa21.44■■□□□ 1.02
HMGA1-205ENST00000447654 MYCBPAPQ8TBZ2 947 aa21.44■■□□□ 1.02
HMGA1-205ENST00000447654 CCHCR1Q8TD31 782 aa21.44■■□□□ 1.02
HMGA1-205ENST00000447654 TMX4Q9H1E5 349 aaPredicted RBP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 EBF2Q9HAK2 575 aa21.44■■□□□ 1.02
HMGA1-205ENST00000447654 ADD3Q9UEY8 706 aaKnown RBP21.44■■□□□ 1.02
HMGA1-205ENST00000447654 COL22A1Q8NFW1 1626 aaPredicted RBP21.43■■□□□ 1.02
HMGA1-205ENST00000447654 KIF23Q02241 960 aaPredicted RBP21.43■■□□□ 1.02
HMGA1-205ENST00000447654 SLC5A9Q2M3M2 681 aa21.43■■□□□ 1.02
HMGA1-205ENST00000447654 PPP4R3AQ6IN85 833 aa21.43■■□□□ 1.02
HMGA1-205ENST00000447654 PSMD1Q99460 953 aa21.43■■□□□ 1.02
HMGA1-205ENST00000447654 PDHBP11177 359 aa21.43■■□□□ 1.02
HMGA1-205ENST00000447654 KIF6Q6ZMV9 814 aa21.43■■□□□ 1.02
HMGA1-205ENST00000447654 ARMC9Q7Z3E5 817 aa21.43■■□□□ 1.02
HMGA1-205ENST00000447654 CD302Q8IX05 232 aa21.43■■□□□ 1.02
HMGA1-205ENST00000447654 LMBR1Q8WVP7 490 aa21.43■■□□□ 1.02
HMGA1-205ENST00000447654 SPDL1Q96EA4 605 aa21.43■■□□□ 1.02
HMGA1-205ENST00000447654 RABEP2Q9H5N1 569 aa21.43■■□□□ 1.02
HMGA1-205ENST00000447654 RPS6KA3P51812 740 aa21.42■■□□□ 1.02
HMGA1-205ENST00000447654 IFT88Q13099 833 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms