RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 ATP8B2P98198 1209 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 IFT88Q13099 833 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 KCNB1Q14721 858 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 AKNAD1Q5T1N1 836 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 PRR23BQ6ZRT6 265 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 FUKQ8N0W3 1084 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 AGGF1Q8N302 714 aaeCLIP3.22□□□□□ -1.895e-8■■■■□ 20.3
CHD9-203ENST00000447540 FAXDC2Q96IV6 333 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 INTUQ9ULD6 942 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 IRF6O14896 467 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ZC3H11AO75152 810 aaKnown RBP eCLIP3.22□□□□□ -1.89
CHD9-203ENST00000447540 TRIM37O94972 964 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 FAM200BP0CF97 657 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 DCTN2Q13561 401 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 SPDYCQ5MJ68 293 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ATAD3BQ5T9A4 648 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ELOA2Q8IYF1 753 aaPredicted RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 POLE3Q9NRF9 147 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 GOLGA8TH3BQL2 631 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 PPIP5K2O43314 1243 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 GOLGA8HP0CJ92 632 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ME1P48163 572 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 CUL1Q13616 776 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 C20orf194Q5TEA3 1177 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 DPY19L2Q6NUT2 758 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 ARHGAP27Q6ZUM4 889 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 TOGARAM2Q6ZUX3 1019 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 SH3TC1Q8TE82 1336 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 RASSF5Q8WWW0 418 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 TTC1Q99614 292 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 DRC3Q9H069 523 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 MRPL46Q9H2W6 279 aaKnown RBP3.22□□□□□ -1.89
CHD9-203ENST00000447540 KIF9Q9HAQ2 790 aa3.22□□□□□ -1.89
CHD9-203ENST00000447540 DDX21Q9NR30 783 aaKnown RBP eCLIP3.22□□□□□ -1.89
CHD9-203ENST00000447540 A0A0G2JS52 829 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 TBKBP1A7MCY6 615 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 KRT2P35908 639 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 MFSD4BQ5TF39 518 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 INTS8Q75QN2 995 aaKnown RBP3.21□□□□□ -1.89
CHD9-203ENST00000447540 DDHD1Q8NEL9 900 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 RBM46Q8TBY0 533 aaKnown RBP3.21□□□□□ -1.89
CHD9-203ENST00000447540 ZBTB10Q96DT7 871 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 LRGUKQ96M69 825 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 DNAI2Q9GZS0 605 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 CCDC87Q9NVE4 849 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 APOBEC2Q9Y235 224 aaKnown RBP3.21□□□□□ -1.89
CHD9-203ENST00000447540 CUTAO60888 179 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 ATP6V1G1O75348 118 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 RPSAP08865 295 aaKnown RBP3.21□□□□□ -1.89
CHD9-203ENST00000447540 HSPA6P17066 643 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 CTCFP49711 727 aaPredicted RBP3.21□□□□□ -1.89
CHD9-203ENST00000447540 RAB27AP51159 221 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 MAP7D3Q8IWC1 876 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 TRPC4APQ8TEL6 797 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 XPO6Q96QU8 1125 aaKnown RBP3.21□□□□□ -1.89
CHD9-203ENST00000447540 GALNT8Q9NY28 637 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 SEPT3Q9UH03 358 aa3.21□□□□□ -1.89
CHD9-203ENST00000447540 ABCC12Q96J65 1359 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 WNT7AO00755 349 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 CASQ2O14958 399 aaPredicted RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 SULT1B1O43704 296 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 GLRX3O76003 335 aaKnown RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 STMN1P16949 149 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 NR1D1P20393 614 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 BASP1P80723 227 aaKnown RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 DNAJC3Q13217 504 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 CCDC93Q567U6 631 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 PCNX4Q63HM2 1172 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 WDR60Q8WVS4 1066 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 IL17RAQ96F46 866 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 ZNF446Q9NWS9 450 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 HACD3Q9P035 362 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 PHF8Q9UPP1 1060 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 RIMS2Q9UQ26 1411 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 P4HA2O15460 535 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 U2AF1L5P0DN76 240 aaPredicted RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 ERCC5P28715 1186 aaPredicted RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 TTKP33981 857 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 U2AF1Q01081 240 aaKnown RBP eCLIP3.21□□□□□ -1.9
CHD9-203ENST00000447540 KRR1Q13601 381 aaKnown RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 KRT27Q7Z3Y8 459 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 CACTIN-AS1Q8N1I8 211 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 BICC1Q9H694 974 aaKnown RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 DCLRE1BQ9H816 532 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 MTRF1LQ9UGC7 380 aaKnown RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 CROTQ9UKG9 612 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 GRIN2AQ12879 1464 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 COL17A1Q9UMD9 1497 aaPredicted RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 XIAPP98170 497 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 RRS1Q15050 365 aaKnown RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 CFAP221Q4G0U5 840 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 CYP26C1Q6V0L0 522 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 KDM7AQ6ZMT4 941 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 PROCA1Q8NCQ7 364 aaPredicted RBP3.21□□□□□ -1.9
CHD9-203ENST00000447540 WASF1Q92558 559 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 CFAP36Q96G28 342 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 CLMNQ96JQ2 1002 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 ATAD3AQ9NVI7 634 aa3.21□□□□□ -1.9
CHD9-203ENST00000447540 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms