RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 E2F4Q16254 413 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 PDXDC2PQ6P474 469 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 PPFIBP1Q86W92 1011 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 GPIHBP1Q8IV16 184 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 RASSF8Q8NHQ8 419 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 NLRP3Q96P20 1036 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 SETDB2Q96T68 719 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 TMEM60Q9H2L4 133 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 PUF60Q9UHX1 559 aaKnown RBP10.69□□□□□ -0.7
KLHL3-202ENST00000447439 MYH13Q9UKX3 1938 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 PES1O00541 588 aaKnown RBP10.69□□□□□ -0.7
KLHL3-202ENST00000447439 CCP110O43303 1012 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 GYPCP04921 128 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 RCAN1P53805 252 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 PPP2R3AQ06190 1150 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 NFIXQ14938 502 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 KRT31Q15323 416 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 PFKFB3Q16875 520 aaPredicted RBP10.69□□□□□ -0.7
KLHL3-202ENST00000447439 CDKAL1Q5VV42 579 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 HEATR3Q7Z4Q2 680 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 MAPKAPK5Q8IW41 473 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 ELOA2Q8IYF1 753 aaPredicted RBP10.69□□□□□ -0.7
KLHL3-202ENST00000447439 FERMT2Q96AC1 680 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 MTA3Q9BTC8 594 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 KAT14Q9H8E8 782 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 ANKIB1Q9P2G1 1089 aa10.69□□□□□ -0.7
KLHL3-202ENST00000447439 COL22A1Q8NFW1 1626 aaPredicted RBP10.68□□□□□ -0.7
KLHL3-202ENST00000447439 ERICH4A6NGS2 130 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 FGRP09769 529 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 CALM1P0DP23 149 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 CALM2P0DP24 149 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 CALM3P0DP25 149 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 PMS1P54277 932 aaKnown RBP10.68□□□□□ -0.7
KLHL3-202ENST00000447439 INF2Q27J81 1249 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 PNMA1Q8ND90 353 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 TGFBRAP1Q8WUH2 860 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 NELFBQ8WX92 580 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 CCDC34Q96HJ3 373 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 GTPBP4Q9BZE4 634 aaKnown RBP10.68□□□□□ -0.7
KLHL3-202ENST00000447439 STX8Q9UNK0 236 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 N4BP3O15049 544 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 POLR3GO15318 223 aaPredicted RBP10.68□□□□□ -0.7
KLHL3-202ENST00000447439 PNMA6AP0CW24 399 aaPredicted RBP10.68□□□□□ -0.7
KLHL3-202ENST00000447439 UTP14CQ5TAP6 766 aaKnown RBP10.68□□□□□ -0.7
KLHL3-202ENST00000447439 CLEC4GQ6UXB4 293 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 LRRC15Q8TF66 581 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 ADGRG1Q9Y653 693 aa10.68□□□□□ -0.7
KLHL3-202ENST00000447439 CYTH3O43739 400 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 ORC4O43929 436 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 MFAP3LO75121 409 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 PRCPP42785 496 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 BLIDQ8IZY5 108 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 IQUBQ8NA54 791 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 C8orf37Q96NL8 207 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 GSDMAQ96QA5 445 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 CDCA7Q9BWT1 371 aaPredicted RBP10.67□□□□□ -0.7
KLHL3-202ENST00000447439 MKNK2Q9HBH9 465 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 VAT1LQ9HCJ6 419 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 TRIM10Q9UDY6 481 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 MRFAP1Q9Y605 127 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 MYH6P13533 1939 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 MYO1BO43795 1136 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 ZPR1O75312 459 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 SASH3O75995 380 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 CCDC175P0C221 793 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 PBX1P40424 430 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 STAT6P42226 847 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 PLA2G4AP47712 749 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 ERVK-24P63145 666 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 MAP3K9P80192 1104 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 ZNF569Q5MCW4 686 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 WWC2Q6AWC2 1192 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 FCHSD1Q86WN1 690 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 SMARCC1Q92922 1105 aaPredicted RBP10.67□□□□□ -0.7
KLHL3-202ENST00000447439 RREB1Q92766 1687 aa10.67□□□□□ -0.7
KLHL3-202ENST00000447439 RPN1P04843 607 aaKnown RBP10.66□□□□□ -0.7
KLHL3-202ENST00000447439 TM4SF1P30408 202 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 PPP2R5BQ15173 497 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 C4orf32Q8N8J7 132 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 HPS3Q969F9 1004 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 NUP88Q99567 741 aaPredicted RBP10.66□□□□□ -0.7
KLHL3-202ENST00000447439 ZCCHC17Q9NP64 241 aaKnown RBP10.66□□□□□ -0.7
KLHL3-202ENST00000447439 ARPP21Q9UBL0 812 aaPredicted RBP10.66□□□□□ -0.7
KLHL3-202ENST00000447439 KCNJ18B7U540 433 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 NKRFO15226 690 aaKnown RBP eCLIP10.66□□□□□ -0.7
KLHL3-202ENST00000447439 PAK1Q13153 545 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 KCNJ12Q14500 433 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 TERF2Q15554 542 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 TMCO3Q6UWJ1 677 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 UIMC1Q96RL1 719 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 CHP1Q99653 195 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 SLF1Q9BQI6 1058 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 ATP8A2Q9NTI2 1148 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 FAM53CQ9NYF3 392 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 MAD2L2Q9UI95 211 aa10.66□□□□□ -0.7
KLHL3-202ENST00000447439 THRAP3Q9Y2W1 955 aaKnown RBP10.66□□□□□ -0.7
KLHL3-202ENST00000447439 EFCAB8A8MWE9 144 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 TSPY3P0CV98 308 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 TSPY8P0CW00 308 aa10.65□□□□□ -0.7
KLHL3-202ENST00000447439 ERCC3P19447 782 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms