RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 GMCL1P1Q8NEA9 526 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 GPRC5AQ8NFJ5 357 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 GTF3C2Q8WUA4 911 aaPredicted RBP14.04□□□□□ -0.16
RFC4-208ENST00000447345 ABHD8Q96I13 439 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 TMEM47Q9BQJ4 181 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 BTBD7Q9P203 1132 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 MORF4L1Q9UBU8 362 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 MYPNQ86TC9 1320 aa14.04□□□□□ -0.16
RFC4-208ENST00000447345 TOP1P11387 765 aaKnown RBP14.03□□□□□ -0.16
RFC4-208ENST00000447345 MCCP23508 829 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 DSG3P32926 999 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 PRKCZQ05513 592 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 IKQ13123 557 aaPredicted RBP14.03□□□□□ -0.16
RFC4-208ENST00000447345 PLS1Q14651 629 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 PKN2Q16513 984 aaKnown RBP14.03□□□□□ -0.16
RFC4-208ENST00000447345 Q3C1V9 767 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 WDR78Q5VTH9 848 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 FBXO46Q6PJ61 603 aaPredicted RBP14.03□□□□□ -0.16
RFC4-208ENST00000447345 CYB5R4Q7L1T6 521 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 IQCA1Q86XH1 822 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 CCAR1Q8IX12 1150 aaKnown RBP14.03□□□□□ -0.16
RFC4-208ENST00000447345 UBAC1Q9BSL1 405 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 PORCNQ9H237 461 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 CWC22Q9HCG8 908 aaKnown RBP14.03□□□□□ -0.16
RFC4-208ENST00000447345 TCP11L1Q9NUJ3 509 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 ZSWIM5Q9P217 1185 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 SYNPO2Q9UMS6 1093 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 HPS5Q9UPZ3 1129 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 PTPN22Q9Y2R2 807 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 PTCH2Q9Y6C5 1203 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 TNKSO95271 1327 aa14.03□□□□□ -0.16
RFC4-208ENST00000447345 SMCHD1A6NHR9 2005 aa14.02□□□□□ -0.16
RFC4-208ENST00000447345 ZNF236Q9UL36 1845 aa14.02□□□□□ -0.16
RFC4-208ENST00000447345 FRMPD2Q68DX3 1309 aaPredicted RBP14.02□□□□□ -0.17
RFC4-208ENST00000447345 SLC27A2O14975 620 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 BMP3P12645 472 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 SLC1A4P43007 532 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 CREB3L3Q68CJ9 461 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 RCSD1Q6JBY9 416 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 LBX2Q6XYB7 198 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 KCTD1Q719H9 257 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 CHST3Q7LGC8 479 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 NCOA7Q8NI08 942 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 KIFC2Q96AC6 838 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 ZSCAN10Q96SZ4 725 aaPredicted RBP14.02□□□□□ -0.17
RFC4-208ENST00000447345 SLF1Q9BQI6 1058 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 HOXC10Q9NYD6 342 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 PPP1R9AQ9ULJ8 1098 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 GABRQQ9UN88 632 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 RABGAP1Q9Y3P9 1069 aa14.02□□□□□ -0.17
RFC4-208ENST00000447345 TMEM232C9JQI7 657 aa14.01□□□□□ -0.17
RFC4-208ENST00000447345 NOVP48745 357 aa14.01□□□□□ -0.17
RFC4-208ENST00000447345 ENAHQ8N8S7 591 aaPredicted RBP14.01□□□□□ -0.17
RFC4-208ENST00000447345 COA7Q96BR5 231 aa14.01□□□□□ -0.17
RFC4-208ENST00000447345 GMCL1Q96IK5 515 aa14.01□□□□□ -0.17
RFC4-208ENST00000447345 SRRDQ9UH36 339 aa14.01□□□□□ -0.17
RFC4-208ENST00000447345 RBBP6Q7Z6E9 1792 aaKnown RBP14.01□□□□□ -0.17
RFC4-208ENST00000447345 MYCP01106 439 aaPredicted RBP14□□□□□ -0.17
RFC4-208ENST00000447345 GNRH1P01148 92 aa14□□□□□ -0.17
RFC4-208ENST00000447345 HOXD10P28358 340 aa14□□□□□ -0.17
RFC4-208ENST00000447345 SLC4A3P48751 1232 aa14□□□□□ -0.17
RFC4-208ENST00000447345 STAT2P52630 851 aa14□□□□□ -0.17
RFC4-208ENST00000447345 CCNA1P78396 465 aa14□□□□□ -0.17
RFC4-208ENST00000447345 NECTIN1Q15223 517 aa14□□□□□ -0.17
RFC4-208ENST00000447345 RAET1EQ8TD07 263 aa14□□□□□ -0.17
RFC4-208ENST00000447345 DCAF4Q8WV16 495 aa14□□□□□ -0.17
RFC4-208ENST00000447345 MOV10L1Q9BXT6 1211 aaKnown RBP14□□□□□ -0.17
RFC4-208ENST00000447345 SPATC1LQ9H0A9 340 aa14□□□□□ -0.17
RFC4-208ENST00000447345 KAT14Q9H8E8 782 aa14□□□□□ -0.17
RFC4-208ENST00000447345 GPCPD1Q9NPB8 672 aa14□□□□□ -0.17
RFC4-208ENST00000447345 CENPFP49454 3210 aa14□□□□□ -0.17
RFC4-208ENST00000447345 CCDC85CA6NKD9 419 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 VWA5AO00534 786 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 PDHBP11177 359 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 MAPK4P31152 587 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 FLT3LGP49771 235 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 NT5C2P49902 561 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 SNAP25P60880 206 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 COL9A3Q14050 684 aaPredicted RBP13.99□□□□□ -0.17
RFC4-208ENST00000447345 TMEM132BQ14DG7 1078 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 SLC9C1Q4G0N8 1177 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 CCDC178Q5BJE1 867 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 IFIT1BQ5T764 474 aaKnown RBP13.99□□□□□ -0.17
RFC4-208ENST00000447345 RNF20Q5VTR2 975 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 GPR142Q7Z601 462 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 DGKHQ86XP1 1220 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 MB21D2Q8IYB1 491 aaPredicted RBP13.99□□□□□ -0.17
RFC4-208ENST00000447345 MB21D1Q8N884 522 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 PNMA1Q8ND90 353 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 SH3TC2Q8TF17 1288 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 TTC14Q96N46 770 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 FEM1BQ9UK73 627 aa13.99□□□□□ -0.17
RFC4-208ENST00000447345 CTDP1Q9Y5B0 961 aaPredicted RBP13.99□□□□□ -0.17
RFC4-208ENST00000447345 ERICH2A1L162 156 aa13.98□□□□□ -0.17
RFC4-208ENST00000447345 IFIT3O14879 490 aaKnown RBP13.98□□□□□ -0.17
RFC4-208ENST00000447345 REC8O95072 547 aa13.98□□□□□ -0.17
RFC4-208ENST00000447345 GOLGA8HP0CJ92 632 aa13.98□□□□□ -0.17
RFC4-208ENST00000447345 SLC16A2P36021 539 aa13.98□□□□□ -0.17
RFC4-208ENST00000447345 PRMT2P55345 433 aa13.98□□□□□ -0.17
RFC4-208ENST00000447345 ANTXR2P58335 489 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms