RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 CCDC151A5D8V7 595 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 CELF2O95319 508 aaKnown RBP14.91□□□□□ -0.02
DDX56-206ENST00000446987 CHMLP26374 656 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 SART3Q15020 963 aaKnown RBP14.91□□□□□ -0.02
DDX56-206ENST00000446987 SLC9C2Q5TAH2 1124 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 SLF2Q8IX21 1173 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 SH3RF3Q8TEJ3 882 aaPredicted RBP14.91□□□□□ -0.02
DDX56-206ENST00000446987 RABGGTAQ92696 567 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 PPP2R3BQ9Y5P8 575 aa14.91□□□□□ -0.02
DDX56-206ENST00000446987 MYH1P12882 1939 aa14.9□□□□□ -0.02
DDX56-206ENST00000446987 THSD7BQ9C0I4 1608 aa14.9□□□□□ -0.02
DDX56-206ENST00000446987 PATL2C9JE40 543 aaKnown RBP14.9□□□□□ -0.02
DDX56-206ENST00000446987 LDHCP07864 332 aa14.9□□□□□ -0.02
DDX56-206ENST00000446987 NBPF12Q5TAG4 269 aaPredicted RBP14.9□□□□□ -0.02
DDX56-206ENST00000446987 SH3BP5LQ7L8J4 393 aa14.9□□□□□ -0.02
DDX56-206ENST00000446987 FAM83AQ86UY5 434 aa14.9□□□□□ -0.02
DDX56-206ENST00000446987 FCHSD1Q86WN1 690 aa14.9□□□□□ -0.02
DDX56-206ENST00000446987 MIGA1Q8NAN2 632 aa14.9□□□□□ -0.02
DDX56-206ENST00000446987 TRMT1Q9NXH9 659 aaKnown RBP14.9□□□□□ -0.02
DDX56-206ENST00000446987 FZD1Q9UP38 647 aa14.9□□□□□ -0.02
DDX56-206ENST00000446987 COL2A1P02458 1487 aaPredicted RBP14.89□□□□□ -0.03
DDX56-206ENST00000446987 TMEM88BA6NKF7 163 aa14.89□□□□□ -0.03
DDX56-206ENST00000446987 MOB2Q70IA6 237 aa14.89□□□□□ -0.03
DDX56-206ENST00000446987 TTC6Q86TZ1 520 aa14.89□□□□□ -0.03
DDX56-206ENST00000446987 ZNF408Q9H9D4 720 aa14.89□□□□□ -0.03
DDX56-206ENST00000446987 ZCCHC17Q9NP64 241 aaKnown RBP14.89□□□□□ -0.03
DDX56-206ENST00000446987 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
DDX56-206ENST00000446987 BAZ2AQ9UIF9 1905 aaKnown RBP14.89□□□□□ -0.03
DDX56-206ENST00000446987 PPFIA4O75335 1185 aa14.89□□□□□ -0.03
DDX56-206ENST00000446987 EIF3JO75822 258 aaKnown RBP14.89□□□□□ -0.03
DDX56-206ENST00000446987 LIG1P18858 919 aa14.89□□□□□ -0.03
DDX56-206ENST00000446987 TNFAIP1Q13829 316 aa14.89□□□□□ -0.03
DDX56-206ENST00000446987 TMED8Q6PL24 325 aaPredicted RBP14.89□□□□□ -0.03
DDX56-206ENST00000446987 LAMB1P07942 1786 aa14.88□□□□□ -0.03
DDX56-206ENST00000446987 POTEB2H3BUK9 544 aa14.88□□□□□ -0.03
DDX56-206ENST00000446987 SMC2O95347 1197 aa14.88□□□□□ -0.03
DDX56-206ENST00000446987 MAP2K1Q02750 393 aaPredicted RBP14.88□□□□□ -0.03
DDX56-206ENST00000446987 TCP10Q12799 353 aa14.88□□□□□ -0.03
DDX56-206ENST00000446987 STX1AQ16623 288 aa14.88□□□□□ -0.03
DDX56-206ENST00000446987 RSRC2Q7L4I2 434 aaKnown RBP14.88□□□□□ -0.03
DDX56-206ENST00000446987 LRRN4CLQ8ND94 238 aa14.88□□□□□ -0.03
DDX56-206ENST00000446987 FAM151AQ8WW52 585 aa14.88□□□□□ -0.03
DDX56-206ENST00000446987 ANO2Q9NQ90 1003 aa14.88□□□□□ -0.03
DDX56-206ENST00000446987 DACT1Q9NYF0 836 aa14.88□□□□□ -0.03
DDX56-206ENST00000446987 TLL2Q9Y6L7 1015 aa14.88□□□□□ -0.03
DDX56-206ENST00000446987 SLURP2P0DP57 97 aa14.87□□□□□ -0.03
DDX56-206ENST00000446987 PDCP20941 246 aa14.87□□□□□ -0.03
DDX56-206ENST00000446987 UBE3CQ15386 1083 aa14.87□□□□□ -0.03
DDX56-206ENST00000446987 EP400NLQ6ZTU2 488 aa14.87□□□□□ -0.03
DDX56-206ENST00000446987 SAPCD2Q86UD0 394 aa14.87□□□□□ -0.03
DDX56-206ENST00000446987 LCORLQ8N3X6 602 aa14.87□□□□□ -0.03
DDX56-206ENST00000446987 PUS7LQ9H0K6 701 aaKnown RBP14.87□□□□□ -0.03
DDX56-206ENST00000446987 GBA2Q9HCG7 927 aaPredicted RBP14.87□□□□□ -0.03
DDX56-206ENST00000446987 TMOD2Q9NZR1 351 aa14.87□□□□□ -0.03
DDX56-206ENST00000446987 PCNTO95613 3336 aa14.87□□□□□ -0.03
DDX56-206ENST00000446987 FLT1P17948 1338 aa14.87□□□□□ -0.03
DDX56-206ENST00000446987 ENTPD3O75355 529 aa14.86□□□□□ -0.03
DDX56-206ENST00000446987 NPM3O75607 178 aaKnown RBP14.86□□□□□ -0.03
DDX56-206ENST00000446987 SEC31AO94979 1220 aaKnown RBP14.86□□□□□ -0.03
DDX56-206ENST00000446987 EVCP57679 992 aa14.86□□□□□ -0.03
DDX56-206ENST00000446987 C11orf91Q3C1V1 193 aa14.86□□□□□ -0.03
DDX56-206ENST00000446987 DNAJC21Q5F1R6 531 aaKnown RBP14.86□□□□□ -0.03
DDX56-206ENST00000446987 TEX11Q8IYF3 940 aa14.86□□□□□ -0.03
DDX56-206ENST00000446987 OSBP2Q969R2 916 aa14.86□□□□□ -0.03
DDX56-206ENST00000446987 DNAJC25Q9H1X3 360 aa14.86□□□□□ -0.03
DDX56-206ENST00000446987 DDTLA6NHG4 134 aaPredicted RBP14.86□□□□□ -0.03
DDX56-206ENST00000446987 ERCC3P19447 782 aa14.86□□□□□ -0.03
DDX56-206ENST00000446987 APOBRQ0VD83 1088 aa14.86□□□□□ -0.03
DDX56-206ENST00000446987 PICALMQ13492 652 aa14.86□□□□□ -0.03
DDX56-206ENST00000446987 UPF3BQ9BZI7 483 aaKnown RBP14.86□□□□□ -0.03
DDX56-206ENST00000446987 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.86□□□□□ -0.032e-6■■■□□ 16
DDX56-206ENST00000446987 GOLGA6L4A6NEF3 574 aa14.85□□□□□ -0.03
DDX56-206ENST00000446987 GOLGA6L9A6NEM1 432 aa14.85□□□□□ -0.03
DDX56-206ENST00000446987 RASSF10A6NK89 507 aa14.85□□□□□ -0.03
DDX56-206ENST00000446987 USP5P45974 858 aa14.85□□□□□ -0.03
DDX56-206ENST00000446987 TNNI2P48788 182 aa14.85□□□□□ -0.03
DDX56-206ENST00000446987 ARID5BQ14865 1188 aa14.85□□□□□ -0.03
DDX56-206ENST00000446987 LRCH2Q5VUJ6 765 aa14.85□□□□□ -0.03
DDX56-206ENST00000446987 NOL8Q76FK4 1167 aaKnown RBP14.85□□□□□ -0.03
DDX56-206ENST00000446987 NBPF11Q86T75 865 aa14.85□□□□□ -0.03
DDX56-206ENST00000446987 HOMEZQ8IX15 550 aa14.85□□□□□ -0.03
DDX56-206ENST00000446987 CKAP2LQ8IYA6 745 aa14.85□□□□□ -0.03
DDX56-206ENST00000446987 DNAJC5GQ8N7S2 189 aa14.85□□□□□ -0.03
DDX56-206ENST00000446987 MAGEB6P1A0A0J9YX57 407 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 H3BQF6 201 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 M0R2C6 588 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 RNF113AO15541 343 aaKnown RBP14.84□□□□□ -0.03
DDX56-206ENST00000446987 MBD4O95243 580 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 BAG3O95817 575 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 TUBBP07437 444 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 GJB2P29033 226 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 AK2P54819 239 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 E2F4Q16254 413 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 LONRF2Q1L5Z9 754 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 RUFY3Q7L099 469 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 HDXQ7Z353 690 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 JMYQ8N9B5 988 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 FAM71BQ8TC56 605 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 TGFBRAP1Q8WUH2 860 aa14.84□□□□□ -0.03
DDX56-206ENST00000446987 APPBP2Q92624 585 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms