RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 WDR78Q5VTH9 848 aa17.53■□□□□ 0.4
HDAC4-204ENST00000446876 SLFN13Q68D06 897 aa17.53■□□□□ 0.4
HDAC4-204ENST00000446876 GMCL1P1Q8NEA9 526 aa17.53■□□□□ 0.4
HDAC4-204ENST00000446876 ZNF333Q96JL9 665 aa17.53■□□□□ 0.4
HDAC4-204ENST00000446876 RNF41Q9H4P4 317 aaPredicted RBP17.53■□□□□ 0.4
HDAC4-204ENST00000446876 HOXC10Q9NYD6 342 aa17.53■□□□□ 0.4
HDAC4-204ENST00000446876 CTNNA3Q9UI47 895 aa17.53■□□□□ 0.4
HDAC4-204ENST00000446876 MTMR7Q9Y216 660 aa17.53■□□□□ 0.4
HDAC4-204ENST00000446876 B4E1Z4 1266 aa17.52■□□□□ 0.4
HDAC4-204ENST00000446876 GRK4P32298 578 aa17.52■□□□□ 0.4
HDAC4-204ENST00000446876 PLS1Q14651 629 aa17.52■□□□□ 0.4
HDAC4-204ENST00000446876 GPR142Q7Z601 462 aa17.52■□□□□ 0.4
HDAC4-204ENST00000446876 CCAR1Q8IX12 1150 aaKnown RBP17.52■□□□□ 0.4
HDAC4-204ENST00000446876 ZKSCAN3Q9BRR0 538 aa17.52■□□□□ 0.4
HDAC4-204ENST00000446876 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.4
HDAC4-204ENST00000446876 GJD2Q9UKL4 321 aa17.52■□□□□ 0.4
HDAC4-204ENST00000446876 PPP1R9AQ9ULJ8 1098 aa17.52■□□□□ 0.4
HDAC4-204ENST00000446876 ISY1Q9ULR0 285 aaKnown RBP17.52■□□□□ 0.4
HDAC4-204ENST00000446876 RBBP6Q7Z6E9 1792 aaKnown RBP17.52■□□□□ 0.4
HDAC4-204ENST00000446876 ADCY3O60266 1144 aa17.51■□□□□ 0.39
HDAC4-204ENST00000446876 KDM4AO75164 1064 aa17.51■□□□□ 0.39
HDAC4-204ENST00000446876 PCP11498 1178 aaKnown RBP17.51■□□□□ 0.39
HDAC4-204ENST00000446876 MAPK4P31152 587 aa17.51■□□□□ 0.39
HDAC4-204ENST00000446876 CCNA1P78396 465 aa17.51■□□□□ 0.39
HDAC4-204ENST00000446876 PLEKHH3Q7Z736 793 aa17.51■□□□□ 0.39
HDAC4-204ENST00000446876 ESR2Q92731 530 aa17.51■□□□□ 0.39
HDAC4-204ENST00000446876 SLF1Q9BQI6 1058 aa17.51■□□□□ 0.39
HDAC4-204ENST00000446876 ESYT1Q9BSJ8 1104 aa17.51■□□□□ 0.39
HDAC4-204ENST00000446876 MOV10L1Q9BXT6 1211 aaKnown RBP17.51■□□□□ 0.39
HDAC4-204ENST00000446876 SPATC1LQ9H0A9 340 aa17.51■□□□□ 0.39
HDAC4-204ENST00000446876 CWC22Q9HCG8 908 aaKnown RBP17.51■□□□□ 0.39
HDAC4-204ENST00000446876 SYNPO2Q9UMS6 1093 aa17.51■□□□□ 0.39
HDAC4-204ENST00000446876 TAF6LQ9Y6J9 622 aa17.51■□□□□ 0.39
HDAC4-204ENST00000446876 CYP2B6P20813 491 aa17.5■□□□□ 0.39
HDAC4-204ENST00000446876 MCCP23508 829 aa17.5■□□□□ 0.39
HDAC4-204ENST00000446876 NOVP48745 357 aa17.5■□□□□ 0.39
HDAC4-204ENST00000446876 IRF5Q13568 498 aa17.5■□□□□ 0.39
HDAC4-204ENST00000446876 TMEM132BQ14DG7 1078 aa17.5■□□□□ 0.39
HDAC4-204ENST00000446876 MTFR1Q15390 333 aa17.5■□□□□ 0.39
HDAC4-204ENST00000446876 NBPF11Q86T75 865 aa17.5■□□□□ 0.39
HDAC4-204ENST00000446876 MB21D1Q8N884 522 aa17.5■□□□□ 0.39
HDAC4-204ENST00000446876 TMEM47Q9BQJ4 181 aa17.5■□□□□ 0.39
HDAC4-204ENST00000446876 TCP11L1Q9NUJ3 509 aa17.5■□□□□ 0.39
HDAC4-204ENST00000446876 ADAMTS5Q9UNA0 930 aa17.5■□□□□ 0.39
HDAC4-204ENST00000446876 POTEFA5A3E0 1075 aa17.49■□□□□ 0.39
HDAC4-204ENST00000446876 VWA5AO00534 786 aa17.49■□□□□ 0.39
HDAC4-204ENST00000446876 CYP21A2P08686 494 aa17.49■□□□□ 0.39
HDAC4-204ENST00000446876 BMP3P12645 472 aa17.49■□□□□ 0.39
HDAC4-204ENST00000446876 PPP4R3BQ5MIZ7 849 aa17.49■□□□□ 0.39
HDAC4-204ENST00000446876 RCSD1Q6JBY9 416 aa17.49■□□□□ 0.39
HDAC4-204ENST00000446876 KCTD1Q719H9 257 aa17.49■□□□□ 0.39
HDAC4-204ENST00000446876 SLAIN1Q8ND83 568 aa17.49■□□□□ 0.39
HDAC4-204ENST00000446876 REPS2Q8NFH8 660 aa17.49■□□□□ 0.39
HDAC4-204ENST00000446876 KIFC2Q96AC6 838 aa17.49■□□□□ 0.39
HDAC4-204ENST00000446876 BIN2Q9UBW5 565 aaPredicted RBP17.49■□□□□ 0.39
HDAC4-204ENST00000446876 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
HDAC4-204ENST00000446876 U3KPZ7 1027 aaPredicted RBP17.49■□□□□ 0.39
HDAC4-204ENST00000446876 KIAA0100Q14667 2235 aaKnown RBP17.48■□□□□ 0.39
HDAC4-204ENST00000446876 TMEM232C9JQI7 657 aa17.48■□□□□ 0.39
HDAC4-204ENST00000446876 TOP1P11387 765 aaKnown RBP17.48■□□□□ 0.39
HDAC4-204ENST00000446876 ERCC3P19447 782 aa17.48■□□□□ 0.39
HDAC4-204ENST00000446876 SLC1A4P43007 532 aa17.48■□□□□ 0.39
HDAC4-204ENST00000446876 MORN1Q5T089 497 aa17.48■□□□□ 0.39
HDAC4-204ENST00000446876 MAP4K1Q92918 833 aa17.48■□□□□ 0.39
HDAC4-204ENST00000446876 GMCL1Q96IK5 515 aa17.48■□□□□ 0.39
HDAC4-204ENST00000446876 NUDT12Q9BQG2 462 aa17.48■□□□□ 0.39
HDAC4-204ENST00000446876 LSG1Q9H089 658 aaKnown RBP17.48■□□□□ 0.39
HDAC4-204ENST00000446876 ZNFX1Q9P2E3 1918 aaKnown RBP17.48■□□□□ 0.39
HDAC4-204ENST00000446876 ZNF236Q9UL36 1845 aa17.47■□□□□ 0.39
HDAC4-204ENST00000446876 CDC45O75419 566 aa17.47■□□□□ 0.39
HDAC4-204ENST00000446876 INHAP05111 366 aa17.47■□□□□ 0.39
HDAC4-204ENST00000446876 TRIM32Q13049 653 aa17.47■□□□□ 0.39
HDAC4-204ENST00000446876 CCDC96Q2M329 555 aa17.47■□□□□ 0.39
HDAC4-204ENST00000446876 ERICH6BQ5W0A0 696 aa17.47■□□□□ 0.39
HDAC4-204ENST00000446876 STOX1Q6ZVD7 989 aa17.47■□□□□ 0.39
HDAC4-204ENST00000446876 NCAPG2Q86XI2 1143 aa17.47■□□□□ 0.39
HDAC4-204ENST00000446876 SOCS4Q8WXH5 440 aa17.47■□□□□ 0.39
HDAC4-204ENST00000446876 USP6NLQ92738 828 aa17.47■□□□□ 0.39
HDAC4-204ENST00000446876 ZSWIM5Q9P217 1185 aa17.47■□□□□ 0.39
HDAC4-204ENST00000446876 FEM1BQ9UK73 627 aa17.47■□□□□ 0.39
HDAC4-204ENST00000446876 ZNF214Q9UL59 606 aaPredicted RBP17.47■□□□□ 0.39
HDAC4-204ENST00000446876 FRMPD2Q68DX3 1309 aaPredicted RBP17.47■□□□□ 0.39
HDAC4-204ENST00000446876 PTPREP23469 700 aa17.46■□□□□ 0.39
HDAC4-204ENST00000446876 IKQ13123 557 aaPredicted RBP17.46■□□□□ 0.39
HDAC4-204ENST00000446876 CCL14Q16627 93 aa17.46■□□□□ 0.39
HDAC4-204ENST00000446876 KIAA1211Q6ZU35 1233 aa17.46■□□□□ 0.39
HDAC4-204ENST00000446876 CYB5R4Q7L1T6 521 aa17.46■□□□□ 0.39
HDAC4-204ENST00000446876 PRPF38AQ8NAV1 312 aaKnown RBP17.46■□□□□ 0.39
HDAC4-204ENST00000446876 SHCBP1Q8NEM2 672 aa17.46■□□□□ 0.39
HDAC4-204ENST00000446876 PXYLP1Q8TE99 480 aa17.46■□□□□ 0.39
HDAC4-204ENST00000446876 TRIB2Q92519 343 aa17.46■□□□□ 0.39
HDAC4-204ENST00000446876 KRT23Q9C075 422 aa17.46■□□□□ 0.39
HDAC4-204ENST00000446876 ANO2Q9NQ90 1003 aa17.46■□□□□ 0.39
HDAC4-204ENST00000446876 IVNS1ABPQ9Y6Y0 642 aa17.46■□□□□ 0.39
HDAC4-204ENST00000446876 SLC15A5A6NIM6 579 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 CCL5P13501 91 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 STAT3P40763 770 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 RGS2P41220 211 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 SLC4A3P48751 1232 aa17.45■□□□□ 0.38
HDAC4-204ENST00000446876 STAT2P52630 851 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms