RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 USP17L19D6RCP7 530 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 USP17L20D6RJB6 530 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 TNPO2O14787 897 aaKnown RBP11.95□□□□□ -0.5
LIN54-203ENST00000446851 ORC4O43929 436 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 MARCH6O60337 910 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 TBC1D12O60347 775 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 CNGA1P29973 690 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 USP17L24Q0WX57 530 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 LDLRAD1Q5T700 205 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 TATDN1Q6P1N9 297 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 DPP9Q86TI2 863 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 TMEM87BQ96K49 555 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 ASCC2Q9H1I8 757 aaPredicted RBP11.95□□□□□ -0.5
LIN54-203ENST00000446851 CCPG1Q9ULG6 757 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 TACC3Q9Y6A5 838 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 NPM3O75607 178 aaKnown RBP11.95□□□□□ -0.5
LIN54-203ENST00000446851 CALML3P27482 149 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 COG2Q14746 738 aa11.95□□□□□ -0.5
LIN54-203ENST00000446851 ZFP91Q96JP5 570 aaPredicted RBP11.95□□□□□ -0.5
LIN54-203ENST00000446851 PARK7Q99497 189 aaKnown RBP11.95□□□□□ -0.5
LIN54-203ENST00000446851 TIAM2Q8IVF5 1701 aa11.94□□□□□ -0.5
LIN54-203ENST00000446851 CXCL11O14625 94 aa11.94□□□□□ -0.5
LIN54-203ENST00000446851 MAP2K1Q02750 393 aaPredicted RBP11.94□□□□□ -0.5
LIN54-203ENST00000446851 TRIM29Q14134 588 aa11.94□□□□□ -0.5
LIN54-203ENST00000446851 SNRNP48Q6IEG0 339 aaKnown RBP11.94□□□□□ -0.5
LIN54-203ENST00000446851 EEPD1Q7L9B9 569 aa11.94□□□□□ -0.5
LIN54-203ENST00000446851 EMILIN3Q9NT22 766 aa11.94□□□□□ -0.5
LIN54-203ENST00000446851 PASKQ96RG2 1323 aa11.94□□□□□ -0.5
LIN54-203ENST00000446851 H3BQV1 296 aa11.94□□□□□ -0.5
LIN54-203ENST00000446851 IGF2BP3O00425 579 aaKnown RBP eCLIP11.94□□□□□ -0.5
LIN54-203ENST00000446851 RABEP1Q15276 862 aa11.94□□□□□ -0.5
LIN54-203ENST00000446851 IFFO2Q5TF58 517 aa11.94□□□□□ -0.5
LIN54-203ENST00000446851 MYO5AQ9Y4I1 1855 aaKnown RBP11.94□□□□□ -0.5
LIN54-203ENST00000446851 CAPN15O75808 1086 aa11.94□□□□□ -0.5
LIN54-203ENST00000446851 CYP2B6P20813 491 aa11.94□□□□□ -0.5
LIN54-203ENST00000446851 HOXC10Q9NYD6 342 aa11.94□□□□□ -0.5
LIN54-203ENST00000446851 VPS37CA5D8V6 355 aaPredicted RBP11.93□□□□□ -0.5
LIN54-203ENST00000446851 CRHR2Q13324 411 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 BECN1Q14457 450 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 GPKOWQ92917 476 aaPredicted RBP eCLIP11.93□□□□□ -0.5
LIN54-203ENST00000446851 SLF1Q9BQI6 1058 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 AFG3L2Q9Y4W6 797 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 CCDC196A0A1B0GTZ2 297 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 TULP1O00294 542 aaPredicted RBP11.93□□□□□ -0.5
LIN54-203ENST00000446851 ANKRD1Q15327 319 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 TMX2Q9Y320 296 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 TRIM17Q9Y577 477 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 AKAP11Q9UKA4 1901 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 ATRNL1Q5VV63 1379 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 SORBS3O60504 671 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 SLC10A3P09131 477 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 PCP11498 1178 aaKnown RBP11.93□□□□□ -0.5
LIN54-203ENST00000446851 LBX1P52954 281 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 ANTXR2P58335 489 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 UBXN2AP68543 259 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 DGKHQ86XP1 1220 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 FANCBQ8NB91 859 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 RRP36Q96EU6 259 aaKnown RBP11.93□□□□□ -0.5
LIN54-203ENST00000446851 NYAP2Q9P242 653 aa11.93□□□□□ -0.5
LIN54-203ENST00000446851 BAZ2AQ9UIF9 1905 aaKnown RBP11.93□□□□□ -0.5
LIN54-203ENST00000446851 PLEKHA8P1O95397 391 aa11.92□□□□□ -0.5
LIN54-203ENST00000446851 ZBTB48P10074 688 aaPredicted RBP11.92□□□□□ -0.5
LIN54-203ENST00000446851 HERVK_113P62684 666 aa11.92□□□□□ -0.5
LIN54-203ENST00000446851 MB21D2Q8IYB1 491 aaPredicted RBP11.92□□□□□ -0.5
LIN54-203ENST00000446851 COA7Q96BR5 231 aa11.92□□□□□ -0.5
LIN54-203ENST00000446851 PIGSQ96S52 555 aa11.92□□□□□ -0.5
LIN54-203ENST00000446851 SMC3Q9UQE7 1217 aa11.92□□□□□ -0.5
LIN54-203ENST00000446851 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.92□□□□□ -0.5
LIN54-203ENST00000446851 ADAMTSL1Q8N6G6 1762 aa11.92□□□□□ -0.5
LIN54-203ENST00000446851 NAPAP54920 295 aa11.92□□□□□ -0.5
LIN54-203ENST00000446851 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
LIN54-203ENST00000446851 PRPF38AQ8NAV1 312 aaKnown RBP11.92□□□□□ -0.5
LIN54-203ENST00000446851 ANAPC4Q9UJX5 808 aa11.92□□□□□ -0.5
LIN54-203ENST00000446851 HSPA1AP0DMV8 641 aaKnown RBP11.92□□□□□ -0.5
LIN54-203ENST00000446851 HSPA1BP0DMV9 641 aaKnown RBP11.92□□□□□ -0.5
LIN54-203ENST00000446851 GUCY1A2P33402 732 aa11.92□□□□□ -0.5
LIN54-203ENST00000446851 APOA5Q6Q788 366 aa11.92□□□□□ -0.5
LIN54-203ENST00000446851 EFCC1Q9HA90 598 aa11.92□□□□□ -0.5
LIN54-203ENST00000446851 STAT3P40763 770 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 CCNA1P78396 465 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 SP4Q02446 784 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 KCTD2Q14681 263 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 SYDE2Q5VT97 1194 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 AGBL1Q96MI9 1066 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 BRPF3Q9ULD4 1205 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 PCDHA1Q9Y5I3 950 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 SH2B2O14492 632 aaPredicted RBP11.91□□□□□ -0.5
LIN54-203ENST00000446851 NCLP19338 710 aaKnown RBP11.91□□□□□ -0.5
LIN54-203ENST00000446851 PSMC4P43686 418 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 RCSD1Q6JBY9 416 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.91□□□□□ -0.5
LIN54-203ENST00000446851 KIAA1683Q9H0B3 1180 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 PKD2L1Q9P0L9 805 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 ORC3Q9UBD5 711 aaPredicted RBP11.91□□□□□ -0.5
LIN54-203ENST00000446851 LIMCH1Q9UPQ0 1083 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 PDHBP11177 359 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 NLRP5P59047 1200 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 SSRP1Q08945 709 aaKnown RBP11.91□□□□□ -0.5
LIN54-203ENST00000446851 KIAA1755Q5JYT7 1200 aa11.91□□□□□ -0.5
LIN54-203ENST00000446851 LPAR1Q92633 364 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms