RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 DHX40Q8IX18 779 aaKnown RBP10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 C7orf43Q8WVR3 580 aa10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 LZTS2Q9BRK4 669 aa10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 TTC12Q9H892 705 aaPredicted RBP10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 PCDHA4Q9UN74 947 aa10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 TNS1Q9HBL0 1735 aaKnown RBP10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 FAM237AA0A1B0GTK4 181 aa10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 FOXN1O15353 648 aa10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 RAD21O60216 631 aa10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 NLRP12P59046 1061 aa10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 ZNF579Q8NAF0 562 aaKnown RBP10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 SH3GLB2Q9NR46 395 aa10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 SWAP70Q9UH65 585 aa10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 SERTAD1Q9UHV2 236 aa10.89□□□□□ -0.67
COL6A4P1-201ENST00000446690 DLEC1Q9Y238 1755 aa10.88□□□□□ -0.67
COL6A4P1-201ENST00000446690 VWA3AA6NCI4 1184 aa10.88□□□□□ -0.67
COL6A4P1-201ENST00000446690 FAM196BA6NMK8 535 aa10.88□□□□□ -0.67
COL6A4P1-201ENST00000446690 KIAA2012Q0VF49 1180 aa10.88□□□□□ -0.67
COL6A4P1-201ENST00000446690 METTL16Q86W50 562 aaKnown RBP10.88□□□□□ -0.67
COL6A4P1-201ENST00000446690 TTLL6Q8N841 843 aa10.88□□□□□ -0.67
COL6A4P1-201ENST00000446690 RRP36Q96EU6 259 aaKnown RBP10.88□□□□□ -0.67
COL6A4P1-201ENST00000446690 EPSTI1Q96J88 318 aa10.88□□□□□ -0.67
COL6A4P1-201ENST00000446690 GPCPD1Q9NPB8 672 aa10.88□□□□□ -0.67
COL6A4P1-201ENST00000446690 SEC63Q9UGP8 760 aaKnown RBP10.88□□□□□ -0.67
COL6A4P1-201ENST00000446690 HOOK1Q9UJC3 728 aaKnown RBP10.88□□□□□ -0.67
COL6A4P1-201ENST00000446690 CCDC194A0A1B0GVG4 234 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 STXBP3O00186 592 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 TTLL1O95922 423 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 SHMT1P34896 483 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 ZNF75DP51815 510 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 NAPAP54920 295 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 GRAMD1CQ8IYS0 662 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 SUPT20HQ8NEM7 779 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 CCDC148Q8NFR7 591 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 DHX58Q96C10 678 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 PIGSQ96S52 555 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 TRIM34Q9BYJ4 488 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 TDRD3Q9H7E2 651 aaKnown RBP10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 BARHL2Q9NY43 387 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 DDX60LQ5H9U9 1706 aaKnown RBP10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 SLX4Q8IY92 1834 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 DDTLA6NHG4 134 aaPredicted RBP10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 GOLGA6L6A8MZA4 724 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 BMP15O95972 392 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 PDHBP11177 359 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 FOXP4Q8IVH2 680 aaPredicted RBP10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 SPZ1Q9BXG8 430 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 PCDHA6Q9UN73 950 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 PCDHA8Q9Y5H6 950 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 PCDHA5Q9Y5H7 936 aa10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 BAZ2BQ9UIF8 2168 aaKnown RBP10.87□□□□□ -0.67
COL6A4P1-201ENST00000446690 SMCO2A6NFE2 343 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 YDJCA8MPS7 323 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 RAD17O75943 681 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 DPEP1P16444 411 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 FKBP1AP62942 108 aaKnown RBP10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 SOGA3Q5TF21 947 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 CC2D2BQ6DHV5 1058 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 PLA2G4DQ86XP0 818 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 SYMPKQ92797 1274 aaKnown RBP10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 FERMT2Q96AC1 680 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 FAM198AQ9UFP1 575 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 TRAPPC10P48553 1259 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 ATP2C1P98194 919 aaPredicted RBP10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 POSTNQ15063 836 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 INF2Q27J81 1249 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 CFAP100Q494V2 611 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 MRIQ9BWK5 157 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 ZNF277Q9NRM2 450 aaPredicted RBP10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 PI4KBQ9UBF8 816 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 NRBP1Q9UHY1 535 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 TUBE1Q9UJT0 475 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 SERPINA10Q9UK55 444 aa10.86□□□□□ -0.67
COL6A4P1-201ENST00000446690 PRR29P0C7W0 189 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 AFMP43652 599 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 NOVP48745 357 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 HDLBPQ00341 1268 aaKnown RBP10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 CCDC96Q2M329 555 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 SHROOM1Q2M3G4 852 aaPredicted RBP10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 CERKLQ49MI3 558 aaPredicted RBP10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 CCDC93Q567U6 631 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 LARGE2Q8N3Y3 721 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 PRMT6Q96LA8 375 aaPredicted RBP10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 DHX36Q9H2U1 1008 aaKnown RBP10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 MYH6P13533 1939 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 A0A087X0B3 334 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 IGKV6D-41A0A0C4DH26 115 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 PTGS1P23219 599 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 CCDC186Q7Z3E2 898 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 RTKN2Q8IZC4 609 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 CCDC12Q8WUD4 166 aaPredicted RBP10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 SMARCE1Q969G3 411 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 DNAJC18Q9H819 358 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 C6orf50Q9HD87 102 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 MYH1P12882 1939 aa10.85□□□□□ -0.67
COL6A4P1-201ENST00000446690 CDK5RAP2Q96SN8 1893 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 SMTNL1A8MU46 457 aa10.84□□□□□ -0.67
COL6A4P1-201ENST00000446690 ACTN4O43707 911 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms