RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CHD1LQ86WJ1 897 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 REPS2Q8NFH8 660 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 NKX2-3Q8TAU0 364 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 CEP95Q96GE4 821 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 APBA2Q99767 749 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 SPATC1LQ9H0A9 340 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 RWDD1Q9H446 243 aaPredicted RBP12.98□□□□□ -0.33
SF3A1-203ENST00000444440 ADAMTS5Q9UNA0 930 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 LRRC37A2A6NM11 1700 aa12.98□□□□□ -0.33
SF3A1-203ENST00000444440 SLC15A5A6NIM6 579 aa12.97□□□□□ -0.33
SF3A1-203ENST00000444440 RAD21O60216 631 aa12.97□□□□□ -0.33
SF3A1-203ENST00000444440 COBLO75128 1261 aa12.97□□□□□ -0.33
SF3A1-203ENST00000444440 NDUFB10O96000 172 aa12.97□□□□□ -0.33
SF3A1-203ENST00000444440 TFRCP02786 760 aaKnown RBP12.97□□□□□ -0.33
SF3A1-203ENST00000444440 ZKSCAN1P17029 563 aaPredicted RBP12.97□□□□□ -0.33
SF3A1-203ENST00000444440 ERCC3P19447 782 aa12.97□□□□□ -0.33
SF3A1-203ENST00000444440 CCNA1P78396 465 aa12.97□□□□□ -0.33
SF3A1-203ENST00000444440 NMIQ13287 307 aaPredicted RBP12.97□□□□□ -0.33
SF3A1-203ENST00000444440 LRRFIP1Q32MZ4 808 aaKnown RBP12.97□□□□□ -0.33
SF3A1-203ENST00000444440 CCAR1Q8IX12 1150 aaKnown RBP12.97□□□□□ -0.33
SF3A1-203ENST00000444440 LRRC47Q8N1G4 583 aaKnown RBP12.97□□□□□ -0.33
SF3A1-203ENST00000444440 NAPBQ9H115 298 aa12.97□□□□□ -0.33
SF3A1-203ENST00000444440 SH2D4AQ9H788 454 aa12.97□□□□□ -0.33
SF3A1-203ENST00000444440 HOXC10Q9NYD6 342 aa12.97□□□□□ -0.33
SF3A1-203ENST00000444440 NYAP2Q9P242 653 aa12.97□□□□□ -0.33
SF3A1-203ENST00000444440 CLIP2Q9UDT6 1046 aa12.97□□□□□ -0.33
SF3A1-203ENST00000444440 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
SF3A1-203ENST00000444440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
SF3A1-203ENST00000444440 PDE4AP27815 886 aa12.96□□□□□ -0.33
SF3A1-203ENST00000444440 TRPV1Q8NER1 839 aa12.96□□□□□ -0.33
SF3A1-203ENST00000444440 GOPCQ9HD26 462 aa12.96□□□□□ -0.33
SF3A1-203ENST00000444440 HMX1Q9NP08 348 aaPredicted RBP12.96□□□□□ -0.33
SF3A1-203ENST00000444440 MTMR4Q9NYA4 1195 aa12.96□□□□□ -0.33
SF3A1-203ENST00000444440 PCDH10Q9P2E7 1040 aa12.96□□□□□ -0.33
SF3A1-203ENST00000444440 PPP1R9AQ9ULJ8 1098 aa12.96□□□□□ -0.33
SF3A1-203ENST00000444440 F5H6K3 240 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 H0YGN5 161 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 VWA5AO00534 786 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 NMT2O60551 498 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 HOXC6P09630 235 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 ADORA2AP29274 412 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 TFAP4Q01664 338 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 KLRC3Q07444 240 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 PLS1Q14651 629 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 LHX8Q68G74 356 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 ZNF444Q8N0Y2 327 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-203ENST00000444440 MB21D1Q8N884 522 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 SHCBP1Q8NEM2 672 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 NEDD1Q8NHV4 660 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 RILPL2Q969X0 211 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 CHMP4CQ96CF2 233 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 PAWRQ96IZ0 340 aaKnown RBP12.95□□□□□ -0.34
SF3A1-203ENST00000444440 NACAP1Q9BZK3 213 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 NBPF3Q9H094 633 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 OSBPL3Q9H4L5 887 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 CWC22Q9HCG8 908 aaKnown RBP12.95□□□□□ -0.34
SF3A1-203ENST00000444440 HELLSQ9NRZ9 838 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 ZNF214Q9UL59 606 aaPredicted RBP12.95□□□□□ -0.34
SF3A1-203ENST00000444440 LTBP2Q14767 1821 aa12.95□□□□□ -0.34
SF3A1-203ENST00000444440 TRIM6-TRIM34B2RNG4 842 aa12.94□□□□□ -0.34
SF3A1-203ENST00000444440 CYP2C19P33261 490 aa12.94□□□□□ -0.34
SF3A1-203ENST00000444440 MCMDC2Q4G0Z9 681 aa12.94□□□□□ -0.34
SF3A1-203ENST00000444440 NCAPG2Q86XI2 1143 aa12.94□□□□□ -0.34
SF3A1-203ENST00000444440 MKL1Q969V6 931 aa12.94□□□□□ -0.34
SF3A1-203ENST00000444440 IL17RBQ9NRM6 502 aa12.94□□□□□ -0.34
SF3A1-203ENST00000444440 ANAPC4Q9UJX5 808 aa12.94□□□□□ -0.34
SF3A1-203ENST00000444440 OGDHLQ9ULD0 1010 aa12.94□□□□□ -0.34
SF3A1-203ENST00000444440 RIPK3Q9Y572 518 aa12.94□□□□□ -0.34
SF3A1-203ENST00000444440 IVNS1ABPQ9Y6Y0 642 aa12.94□□□□□ -0.34
SF3A1-203ENST00000444440 PFASO15067 1338 aa12.93□□□□□ -0.34
SF3A1-203ENST00000444440 SLC34A2O95436 690 aa12.93□□□□□ -0.34
SF3A1-203ENST00000444440 FGAP02671 866 aa12.93□□□□□ -0.34
SF3A1-203ENST00000444440 TSPY3P0CV98 308 aa12.93□□□□□ -0.34
SF3A1-203ENST00000444440 TSPY8P0CW00 308 aa12.93□□□□□ -0.34
SF3A1-203ENST00000444440 HSPD1P10809 573 aaKnown RBP12.93□□□□□ -0.34
SF3A1-203ENST00000444440 SDSP20132 328 aa12.93□□□□□ -0.34
SF3A1-203ENST00000444440 PDE4BQ07343 736 aa12.93□□□□□ -0.34
SF3A1-203ENST00000444440 ALX1Q15699 326 aa12.93□□□□□ -0.34
SF3A1-203ENST00000444440 TRMT44Q8IYL2 757 aaKnown RBP12.93□□□□□ -0.34
SF3A1-203ENST00000444440 DPF3Q92784 378 aa12.93□□□□□ -0.34
SF3A1-203ENST00000444440 SLF1Q9BQI6 1058 aa12.93□□□□□ -0.34
SF3A1-203ENST00000444440 IL25Q9H293 177 aa12.93□□□□□ -0.34
SF3A1-203ENST00000444440 CCDC171Q6TFL3 1326 aa12.92□□□□□ -0.34
SF3A1-203ENST00000444440 TRIOBPQ9H2D6 2365 aa12.92□□□□□ -0.34
SF3A1-203ENST00000444440 LAMA2P24043 3122 aaKnown RBP12.92□□□□□ -0.34
SF3A1-203ENST00000444440 TTLL1O95922 423 aa12.92□□□□□ -0.34
SF3A1-203ENST00000444440 FGRP09769 529 aa12.92□□□□□ -0.34
SF3A1-203ENST00000444440 CYBAP13498 195 aa12.92□□□□□ -0.34
SF3A1-203ENST00000444440 HAND2P61296 217 aa12.92□□□□□ -0.34
SF3A1-203ENST00000444440 RIOX2Q8IUF8 465 aa12.92□□□□□ -0.34
SF3A1-203ENST00000444440 COLQQ9Y215 455 aaPredicted RBP12.92□□□□□ -0.34
SF3A1-203ENST00000444440 STRNO43815 780 aa12.91□□□□□ -0.34
SF3A1-203ENST00000444440 PGK2P07205 417 aa12.91□□□□□ -0.34
SF3A1-203ENST00000444440 GSPT1P15170 499 aaKnown RBP12.91□□□□□ -0.34
SF3A1-203ENST00000444440 STAT3P40763 770 aa12.91□□□□□ -0.34
SF3A1-203ENST00000444440 NOVP48745 357 aa12.91□□□□□ -0.34
SF3A1-203ENST00000444440 HABP4Q5JVS0 413 aaKnown RBP12.91□□□□□ -0.34
SF3A1-203ENST00000444440 PRAMEF19Q5SWL8 479 aa12.91□□□□□ -0.34
SF3A1-203ENST00000444440 SLFN13Q68D06 897 aa12.91□□□□□ -0.34
SF3A1-203ENST00000444440 DPP9Q86TI2 863 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms